ID   JQ350239; SV 1; linear; genomic DNA; STD; VRT; 654 BP.
XX
AC   JQ350239;
XX
DT   25-MAR-2012 (Rel. 112, Created)
DT   25-MAR-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Pomacentrus agassizii voucher ECOMAR<FRA>:REU2832 cytochrome oxidase
DE   subunit 1 (COI) gene, partial cds; mitochondrial.
XX
KW   BARCODE.
XX
OS   Pomacentrus agassizii (creole damsel)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Pomacentridae; Pomacentrus.
OG   Mitochondrion
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-654
RX   PUBMED; 22438862.
RA   Hubert N., Meyer C.P., Bruggemann H.J., Guerin F., Komeno R.J., Espiau B.,
RA   Causse R., Williams J.T., Planes S.;
RT   "Cryptic Diversity in Indo-Pacific Coral-Reef Fishes Revealed by
RT   DNA-Barcoding Provides New Support to the Centre-of-Overlap Hypothesis";
RL   PLoS One 7(3):E28987-E28987(2012).
XX
RN   [2]
RP   1-654
RA   Nicolas H., Chris M., Roberto M., Benoit M., Benoit M., Benoit E.,
RA   Romain C., Jeff W., Serge P.;
RT   ;
RL   Submitted (04-JAN-2012) to the INSDC.
RL   Resources and Environment, IRD, 361 rue Jean Francois Breton, Montpellier
RL   cedex 5, Herault 34196, France
XX
DR   MD5; 6726c75d6f2e8c96a68b09dd93ca0775.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..654
FT                   /organism="Pomacentrus agassizii"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="Reunion:Ouest, La Saline, Trou d'eau"
FT                   /lat_lon="21.1 S 55.24 E"
FT                   /specimen_voucher="ECOMAR<FRA>:REU2832"
FT                   /collected_by="Serge Planes, Nicolas Hubert, Henrich
FT                   Bruggemann"
FT                   /collection_date="07-Nov-2007"
FT                   /identified_by="Serge Planes"
FT                   /PCR_primers="fwd_seq: tcaacyaatcayaaagatatyggcac, rev_seq:
FT                   acttcygggtgrccraaraatca"
FT                   /db_xref="taxon:997978"
FT   gene            <1..>654
FT                   /gene="COI"
FT   CDS             <1..>654
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:H9CLM7"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:H9CLM7"
FT                   /protein_id="AFA55779.1"
FT                   /translation="TLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAH
FT                   AFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEA
FT                   GAGTGWTVYPPLSGNLAHAGASVDLTIFSLHLAGISSILGAIIFITTIINMKPPAISQY
FT                   QTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQH"
XX
SQ   Sequence 654 BP; 153 A; 188 C; 115 G; 198 T; 0 other;
     caccctttat ctagtatttg gtgcttgagc cggaatagta ggaacagctt taagcctcct        60
     aattcgggca gaattaagcc aaccaggcgc tcttctcgga gacgaccaaa tttataatgt       120
     tattgttaca gcacacgctt ttgtaataat tttctttata gtaatgccaa tcataattgg       180
     agggtttgga aactggctca ttcccctcat gatcggagcc cctgacatgg ccttcccccg       240
     tataaacaat atgagcttct gactcctccc cccttcgttt cttcttctac tcgcctcctc       300
     aggtgttgaa gcaggtgcag ggacaggatg aactgtctac cccccactat ctggcaacct       360
     agcccacgcg ggagcttccg ttgatttaac tattttctcc ctccacttag caggtatttc       420
     ttctattcta ggagctatca tcttcattac cacaattatt aacataaaac cacccgctat       480
     ctcccagtac cagacccctc tcttcgtatg ggcagtactt attactgctg ttctgcttct       540
     gctatctctc ccagtgttgg ccgccggtat tactatactt ctaaccgatc gaaacctaaa       600
     taccactttc tttgaccccg caggcggagg agaccctatt ctctaccaac actt             654
//