ID   JQ619660; SV 1; linear; genomic DNA; STD; VRT; 643 BP.
XX
AC   JQ619660;
XX
DT   16-SEP-2012 (Rel. 114, Created)
DT   27-JUN-2018 (Rel. 137, Last updated, Version 2)
XX
DE   Typhleotris sp. MPD-2012 cytochrome b (cytb) gene, partial cds;
DE   mitochondrial.
XX
KW   .
XX
OS   Typhleotris sp. MPD-2012
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Gobiaria; Gobiiformes; Eleotroidei; Eleotridae; Butinae; Typhleotris;
OC   unclassified Typhleotris.
OG   Mitochondrion
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-643
RX   PUBMED; 22937155.
RA   Chakrabarty P., Davis M.P., Sparks J.S.;
RT   "The First Record of a Trans-Oceanic Sister-Group Relationship between
RT   Obligate Vertebrate Troglobites";
RL   PLoS One 7(8):E44083-E44083(2012).
XX
RN   [2]
RP   1-643
RA   Chakrabarty P., Davis M.P., Sparks J.S.;
RT   ;
RL   Submitted (06-FEB-2012) to the INSDC.
RL   Zoology, The Field Museum, 1400 South Lake Shore Drive, Chicago, IL 60605,
RL   USA
XX
DR   MD5; 9083cffcf14706ee4c666ca21baa6e5e.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Geneious v. 2011
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..643
FT                   /organism="Typhleotris sp. MPD-2012"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /country="Madagascar"
FT                   /note="hologenetype (sequence from the holotype specimen)"
FT                   /db_xref="taxon:1230369"
FT   gene            <1..>643
FT                   /gene="cytb"
FT   CDS             <1..>643
FT                   /codon_start=1
FT                   /transl_table=2
FT                   /gene="cytb"
FT                   /product="cytochrome b"
FT                   /db_xref="GOA:J9SZG2"
FT                   /db_xref="InterPro:IPR005797"
FT                   /db_xref="InterPro:IPR016174"
FT                   /db_xref="InterPro:IPR027387"
FT                   /db_xref="UniProtKB/TrEMBL:J9SZG2"
FT                   /protein_id="AFR53390.1"
FT                   /translation="KIASNALIDLPAPSNISAWWNFGSLLGLCLGAQIVTGLFLAMHYT
FT                   SDITTAFSSIAHICRDVNFGWLIRNMHANGASLFFVCIYLHVGRGLYYGSYLYKETWNI
FT                   GVLLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDSAT
FT                   LTRFFTFHFLLPFAIEPQQFSTYYSCTKTGSNNPTGLNSDTNKIPFQPYFS"
XX
SQ   Sequence 643 BP; 174 A; 209 C; 101 G; 159 T; 0 other;
     aaaattgcaa gcaacgcact aatcgaccta cccgccccct ctaacatctc tgcatgatga        60
     aatttcggct ccctgctcgg cctctgcctg ggggctcaaa ttgtcacagg cctatttcta       120
     gcaatacact atacatcaga catcacaaca gccttttcat ccatcgccca catctgccga       180
     gacgtaaact tcggatgatt aatccgaaac atacacgcca acggtgcctc ccttttcttt       240
     gtctgcatct atctccacgt aggccgaggc ctatactacg gatcctacct gtacaaagaa       300
     acctgaaaca ttggggtact gctcctactc ctagtaataa taaccgcatt cgtaggatac       360
     gtcctgccct gaggacaaat gtctttctga ggcgcaacag taattaccaa cctcctctca       420
     gcagtcccct atgtaggcaa caccctagtt caatgaatct gaggcggatt ctcagtagac       480
     agtgcaacct taacccgctt ctttaccttc cacttcctcc ttcccttcgc catcgagcca       540
     caacagttct ccacctacta ttcctgcacg aaaacgggct caaacaaccc aacaggatta       600
     aactccgaca ccaacaaaat cccctttcaa ccatatttct cat                         643
//