ID   JX311884; SV 1; linear; genomic DNA; STD; VRT; 620 BP.
XX
AC   JX311884;
XX
DT   18-JUL-2014 (Rel. 121, Created)
DT   18-JUL-2014 (Rel. 121, Last updated, Version 1)
XX
DE   Cottus cf. beldingii B6 isolate Asotin Creek cytochrome oxidase subunit 1
DE   (COI) gene, partial cds; mitochondrial.
XX
KW   .
XX
OS   Cottus cf. beldingii B6
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Eupercaria; Perciformes; Cottioidei; Cottales; Cottidae; Cottus.
OG   Mitochondrion
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-620
RX   DOI; 10.11646/zootaxa.3755.3.3.
RX   PUBMED; 24869819.
RA   Lemoine M., Young M.K., Mckelvey K.S., Eby L., Pilgrim K.L., Schwartz M.K.;
RT   "Cottus schitsuumsh, a new species of sculpin (Scorpaeniformes: Cottidae)
RT   in the Columbia River basin, Idaho-Montana, USA";
RL   Zootaxa 3755(3):241-258(2014).
XX
RN   [2]
RP   1-620
RA   Young M.K., LeMoine M., Eby L., McKelvey K.S., Pilgrim K.L., Schwartz M.K.;
RT   ;
RL   Submitted (12-JUL-2012) to the INSDC.
RL   Rocky Mountain Research Station, USDA Forest Service, 800 East Beckwith
RL   Avenue, Missoula, MT 59801, USA
XX
DR   MD5; 8a51885a50b5784663b4fd89d486f03e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..620
FT                   /organism="Cottus cf. beldingii B6"
FT                   /organelle="mitochondrion"
FT                   /isolate="Asotin Creek"
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Washington, Asotin Creek"
FT                   /lat_lon="46.26 N 117.3 W"
FT                   /isolation_source="stream"
FT                   /collected_by="G. Merritt"
FT                   /collection_date="09-Aug-2011"
FT                   /haplotype="B6"
FT                   /PCR_primers="fwd_name: ff2d, fwd_seq:
FT                   ttctccaccaaccacaargayatygg, rev_name: fr1d, rev_seq:
FT                   cacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:1330421"
FT   gene            <1..>620
FT                   /gene="COI"
FT   CDS             <1..>620
FT                   /codon_start=1
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit 1"
FT                   /db_xref="GOA:A0A075BLF8"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:A0A075BLF8"
FT                   /protein_id="AGM49412.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVVVTAHA
FT                   FVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIINMKPPAISQYQ
FT                   TPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAG"
XX
SQ   Sequence 620 BP; 140 A; 181 C; 114 G; 185 T; 0 other;
     ctatatctag tatttggtgc ttgagccgga atagtgggca cagctttaag cctcctaatt        60
     cgagcagaac taagccaacc cggagccctt ttgggggacg accagattta taatgtagtt       120
     gttacagccc atgctttcgt aataattttc tttatagtaa taccaattat aattggaggt       180
     ttcgggaact gactcgttcc cctaatgatt ggcgctcctg atatggcctt tcctcgaatg       240
     aataacatga gcttttgact tcttccaccc tcttttctac tcctccttgc ctcttcgggg       300
     gtcgaagcag gggccggaac cggatggaca gtctaccccc cactcgcagg aaacctcgcc       360
     cacgcaggag cctctgttga cctaacaatc ttctcccttc acctagcagg tatttcctct       420
     attcttggag caattaactt tatcacaact atcattaata taaaaccccc tgctatctca       480
     caataccaga ccccgctctt cgtatgatct gttcttatta ctgccgtcct tctgcttctc       540
     tctctccccg tacttgccgc cgggatcaca atgctcctga cagaccgaaa tcttaacacc       600
     accttttttg accctgccgg                                                   620
//