ID   KC764393; SV 1; linear; genomic DNA; STD; ROD; 1188 BP.
XX
AC   KC764393;
XX
DT   31-MAR-2014 (Rel. 120, Created)
DT   01-MAY-2014 (Rel. 120, Last updated, Version 2)
XX
DE   Peromyscus maniculatus voucher Johannesburg2 NADH dehydrogenase subunit 3
DE   (ND3) gene, partial cds; tRNA-Arg (trnR) gene, complete sequence; NADH
DE   dehydrogenase subunit 4L (ND4L) gene, complete cds; and NADH dehydrogenase
DE   subunit 4 (ND4) gene, partial cds; mitochondrial.
XX
KW   .
XX
OS   Peromyscus maniculatus (North American deer mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC   Cricetidae; Neotominae; Peromyscus.
OG   Mitochondrion
XX
RN   [1]
RP   1-1188
RA   Greenbaum I.F., Chirhart S.E., Walker M.L., Honeycutt R.L.;
RT   "Molecular Phylogenetics of Western Deer Mice: Taxonomic and Biogeographic
RT   Implications";
RL   Unpublished.
XX
RN   [2]
RP   1-1188
RA   Greenbaum I.F., Chirhart S.E., Walker M.L., Honeycutt R.L.;
RT   ;
RL   Submitted (12-MAR-2013) to the INSDC.
RL   Department of Biology, Texas A&M University, Biological Sciences Building
RL   East Room 216E, College Station, TX 77843, USA
XX
DR   MD5; 5d9a04b05f5159098bb3f72d0fb31860.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Sequencher v. 4.5
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1188
FT                   /organism="Peromyscus maniculatus"
FT                   /organelle="mitochondrion"
FT                   /mol_type="genomic DNA"
FT                   /specimen_voucher="Johannesburg2"
FT                   /db_xref="taxon:10042"
FT   gene            <1..155
FT                   /gene="ND3"
FT   CDS             <1..155
FT                   /codon_start=3
FT                   /transl_table=2
FT                   /gene="ND3"
FT                   /product="NADH dehydrogenase subunit 3"
FT                   /db_xref="GOA:X2CSA5"
FT                   /db_xref="InterPro:IPR000440"
FT                   /db_xref="InterPro:IPR038430"
FT                   /db_xref="UniProtKB/TrEMBL:X2CSA5"
FT                   /protein_id="AGV29607.1"
FT                   /translation="DLEIALLLPLPWAIQMYNINIMMLTAFILVSVLALGLAHEWLQKG
FT                   LEWTE"
FT   gene            158..223
FT                   /gene="trnR"
FT   tRNA            158..223
FT                   /gene="trnR"
FT                   /product="tRNA-Arg"
FT   gene            227..523
FT                   /gene="ND4L"
FT   CDS             227..523
FT                   /codon_start=1
FT                   /transl_table=2
FT                   /gene="ND4L"
FT                   /product="NADH dehydrogenase subunit 4L"
FT                   /db_xref="GOA:Q96110"
FT                   /db_xref="InterPro:IPR001133"
FT                   /db_xref="InterPro:IPR039428"
FT                   /db_xref="UniProtKB/TrEMBL:Q96110"
FT                   /protein_id="AGV29608.1"
FT                   /translation="MSSVTSNIMLAFSFSFLGTLVFRSHLMSTLLCLEGMMLSLFIMTT
FT                   ITSLNSHSMIMWPLPIVILVFAACEAAIGLALLAKVSNSYGTDYVQNLNLLQC"
FT   gene            517..>1188
FT                   /gene="ND4"
FT   CDS             517..>1188
FT                   /codon_start=1
FT                   /transl_table=2
FT                   /gene="ND4"
FT                   /product="NADH dehydrogenase subunit 4"
FT                   /db_xref="GOA:Q95903"
FT                   /db_xref="InterPro:IPR000260"
FT                   /db_xref="InterPro:IPR001750"
FT                   /db_xref="InterPro:IPR003918"
FT                   /db_xref="UniProtKB/TrEMBL:Q95903"
FT                   /protein_id="AGV29609.1"
FT                   /translation="MLKIIFPSIMLLPLTWLSNKKNLWVNVTSYSFMISLISAMFLWQN
FT                   DMNNLNFSLLFSTDSLSSPLIILTTWLLPLMLLASQNHMKKETESNKKTYISMLVLLQI
FT                   LLIMTFSANELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLIGSIPLLIA
FT                   LIHIQNMKGTLNFMLFPLTFTPLDQTWSNNILWLACMMAFMIKMPLYGVHLWLPKAHVE
FT                   AP"
XX
SQ   Sequence 1188 BP; 418 A; 289 C; 116 G; 365 T; 0 other;
     ttgacctaga aattgcactt ctacttccac taccatgagc tatccaaata tataatatta        60
     acatcataat attaacagct ttcatcctag tctccgtatt agcattaggc ttagcccacg       120
     agtgactaca aaaaggacta gaatgaactg agtaacgggt aattagttta attaaaacaa       180
     atgatttcga ctcattagat tataataaac attataatta ccaaaaatgt catctgtaac       240
     ctccaatatt atattagcat tctcattctc atttctagga acactagtat ttcgatccca       300
     cctaatatca actctcctat gccttgaagg aataatacta tcactgttta ttataaccac       360
     aattacatcc cttaattccc actcaataat tatatgacct ctacccattg ttatcctagt       420
     attcgcagca tgtgaagcag ccattggctt agccctatta gcaaaagtat caaactccta       480
     cggaacagat tatgtacaaa atctaaacct acttcaatgt taaaaattat ttttccctct       540
     atcatattac tcccactcac ctgattatca aacaaaaaaa acctatgagt caatgttacc       600
     tcctacagct ttataatcag cttgatttca gctatgtttt tatgacaaaa cgacataaat       660
     aatctaaact tctcactact attctcaact gactccctat cctcccctct tattattcta       720
     acaacatgac ttctaccact catactgcta gccagccaaa accacataaa aaaggaaaca       780
     gagtcaaaca aaaaaacata tatttcaata ctagtcttac tacaaattct tctaatcata       840
     acattttctg caaacgaact aattatattt tacatcttat ttgaagccac cctaatcccc       900
     acccttatta tcatcacccg atggggtaac caaacagaac gactaaatgc aggactctac       960
     tttctatttt ataccctaat tggatcaatc ccactactaa tcgcccttat ccacattcaa      1020
     aatataaaag gaacattaaa cttcatacta ttcccactca cctttacacc cctagaccaa      1080
     acatggtcta ataatattct atgattagca tgcataatgg catttatgat taaaatacca      1140
     ctatacggag tccacttatg actccctaaa gcccacgtag aagctcca                   1188
//