ID   KM214756; SV 1; linear; genomic DNA; STD; VRT; 652 BP.
XX
AC   KM214756;
XX
DT   28-JAN-2015 (Rel. 123, Created)
DT   28-MAR-2016 (Rel. 128, Last updated, Version 5)
XX
DE   Garra longipinnis isolate cn5897b cytochrome oxidase subunit I (COI) gene,
DE   partial cds; mitochondrial.
XX
KW   .
XX
OS   Garra longipinnis
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Garra.
OG   Mitochondrion
XX
RN   [1]
RP   1-652
RA   Hamidan N.A., Geiger M.F., Freyhof J.;
RT   "Garra jordanica, a new species from the Dead Sea basin with remarks on the
RT   relationship of G. ghorensis, G. tibanica and G. rufa (Teleostei:
RT   Cyprinidae)";
RL   Ichthyol. Explor. Freshw. 25(3):223-236(2014).
XX
RN   [2]
RP   1-652
RA   Behrens-Chapuis S., Herder F., Esmaeili H.R., Freyhof J., Hamidan N.A.,
RA   Ozulug M., Sanda R., Geiger M.F.;
RT   "Adding nuclear rhodopsin data where mitochondrial COI indicates
RT   discrepancies - can this marker help to explain conflicts in cyprinids?";
RL   DNA Barcodes (Berlin) 3:187-199(2015).
XX
RN   [3]
RP   1-652
RA   Geiger M.F., Freyhof J., Herder F.;
RT   ;
RL   Submitted (12-JUL-2014) to the INSDC.
RL   Ichthyology, ZFMK, Adenauerallee 160, Bonn, NRW 53113, Germany
XX
DR   MD5; 7c0780721633522c9ae18001ffb4e451.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..652
FT                   /organism="Garra longipinnis"
FT                   /organelle="mitochondrion"
FT                   /isolate="cn5897b"
FT                   /mol_type="genomic DNA"
FT                   /PCR_primers="fwd_name: VF2_t1, fwd_seq:
FT                   tgtaaaacgacggccagtcaaccaaccacaaagacattggcac, rev_name:
FT                   FR1d_t1, rev_seq:
FT                   caggaaacagctatgacacctcagggtgtccgaaraaycaraa"
FT                   /db_xref="taxon:1523539"
FT   gene            <1..>652
FT                   /gene="COI"
FT   CDS             <1..>652
FT                   /codon_start=2
FT                   /transl_table=2
FT                   /gene="COI"
FT                   /product="cytochrome oxidase subunit I"
FT                   /db_xref="GOA:A0A0B4PJS1"
FT                   /db_xref="InterPro:IPR000883"
FT                   /db_xref="InterPro:IPR023616"
FT                   /db_xref="InterPro:IPR036927"
FT                   /db_xref="UniProtKB/TrEMBL:A0A0B4PJS1"
FT                   /protein_id="AIQ84451.1"
FT                   /translation="LYLVFGAWAGMVGTALSLLIRAELSQPGSLLGDDQIYNVIVTAHA
FT                   FVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAG
FT                   AGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPAISQYQ
FT                   TPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHL"
XX
SQ   Sequence 652 BP; 172 A; 168 C; 121 G; 191 T; 0 other;
     cctttatctt gtattcggtg cttgagctgg tatagtagga actgccttaa gcctccttat        60
     ccgggctgag ctaagccagc ctgggtcact cttaggtgat gaccaaatct acaacgttat       120
     cgttactgct cacgcttttg taataatttt ctttatagtt atacccattc tgattggagg       180
     gtttggaaat tgactagtac cactaataat tggagcccca gacatagcat tcccgcgaat       240
     aaataatata agcttctgat tactaccccc atcgtttcta ttactattag cctcatctgg       300
     tgtagaagcc ggagccggga caggctgaac agtctacccg ccccttgcag gcaaccttgc       360
     ccatgcagga gcgtcagtag acttaacaat tttctcacta catctagcag gggtatcatc       420
     aattctaggg gccatcaatt ttattaccac aaccattaac ataaaacccc cagccatctc       480
     ccaatatcaa acgccactct tcgtgtggtc cgtacttgta accgccgtat tacttttatt       540
     atcactgcca gtactggctg ccgggattac aatgctttta acagatcgaa atcttaacac       600
     cacatttttt gacccggcag gaggaggaga tccaattctt tatcaacacc ta               652
//