ID   MF673348; SV 1; linear; viral cRNA; STD; VRL; 2302 BP.
XX
AC   MF673348;
XX
DT   22-MAR-2018 (Rel. 136, Created)
DT   22-MAR-2018 (Rel. 136, Last updated, Version 3)
XX
DE   Influenza A virus (A/chicken/Jordan/56/2003(H9N2)) segment 1 polymerase PB2
DE   (PB2) gene, complete cds.
XX
KW   .
XX
OS   Influenza A virus (A/chicken/Jordan/56/2003(H9N2))
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes;
OC   Articulavirales; Orthomyxoviridae; Alphainfluenzavirus.
XX
RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-2302
RX   DOI; .1016/j.virol.2018.02.016.
RX   PUBMED; 29524835.
RA   Chrzastek K., Lee D.H., Gharaibeh S., Zsak A., Kapczynski D.R.;
RT   "Characterization of H9N2 avian influenza viruses from the Middle East
RT   demonstrates heterogeneity at amino acid position 226 in the hemagglutinin
RT   and potential for transmission to mammals";
RL   Virology 518:195-201(2018).
XX
RN   [2]
RP   1-2302
RA   Chrzastek K., Lee D.-H., Gharaibeh S., Zsak A., Kapczynski D.;
RT   ;
RL   Submitted (16-AUG-2017) to the INSDC.
RL   U.S. National Poultry research Center, USDA/ARS/SEPRL, 934 College Station
RL   Road, Athens, GA 30605, USA
XX
DR   MD5; 7075ddf7914e12e01e5dc6f10589ff93.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2302
FT                   /organism="Influenza A virus
FT                   (A/chicken/Jordan/56/2003(H9N2))"
FT                   /segment="1"
FT                   /host="chicken"
FT                   /strain="A/chicken/Jordan/56/2003"
FT                   /serotype="H9N2"
FT                   /mol_type="viral cRNA"
FT                   /country="Jordan"
FT                   /collection_date="05-Mar-2003"
FT                   /note="passage details: 1"
FT                   /db_xref="taxon:2027237"
FT   gene            13..2292
FT                   /gene="PB2"
FT   CDS             13..2292
FT                   /codon_start=1
FT                   /gene="PB2"
FT                   /product="polymerase PB2"
FT                   /db_xref="GOA:A0A2P0VFA4"
FT                   /db_xref="InterPro:IPR001591"
FT                   /db_xref="InterPro:IPR037258"
FT                   /db_xref="UniProtKB/TrEMBL:A0A2P0VFA4"
FT                   /protein_id="ASW34410.1"
FT                   /translation="MERIKELRDLMSQSRTREILTKTTVDHMAIIKKYTSGRQEKNPAL
FT                   RMKWMMAMKYPITADKRIMEMIPERNEQGQTLWSKTNDAGSDRVMVSPLAVTWWNRNGP
FT                   TTSTVHYPKVYKTYFEKVERLKHGIFGPVHFRNQVKIRRRVDINPGHADLSAKEAQDVI
FT                   MEVVFPNEVGARILTSESQLTITKEKKEELQDCKIAPLMVAYMLERELVRKTRFLPVAG
FT                   GTSSVYIEVLHLTQGTCWEQMYTPGGEVRNDDVDQSLIIAARNIVRRATVSADPLASLL
FT                   EMCHSTQIGGTRMVDILRQNPTEEQAVDICKAAMGLRISSSFSFGGFTFKRTSGSSIKR
FT                   EEEVLTGNLQTLKIRVHEGYEEFTMVGRRATAILRKATRRLIQLIVSGRDEQSIAEAII
FT                   VAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEPIDNVM
FT                   GMIGILPDMTPSTDMSLRGVRVSKMGVDEYSSTERVAVSIDRFLRVRDQQGNVLLSPEE
FT                   VSETQGTEKLTITYSSSMMWEINGPDSVLVNTYQWIIRSWETVKIQWSQDPTILYNKLE
FT                   FEPFQSLVPKAARGQYSGFVRTLFQQMRDVLGTFDTVQIIKLLPFAAAPPVQSRMQFSS
FT                   LTVNVRGTGMRILVRGNSPVFNYNKATKRLTVLGKDAGALTEDPDEGAAGVESAVLRGF
FT                   LILGKEDKRYGPALSINELGNLAKGEKANVLIGQGDIVLVMKRKRDSSILTDSQTATKR
FT                   IRMAIN"
XX
SQ   Sequence 2302 BP; 759 A; 424 C; 599 G; 520 T; 0 other;
     aatatattca atatggagag aataaaggaa ctaagagatt tgatgtcgca gtctcgcact        60
     cgcgagatac taacaaaaac cacagtggac catatggcca taattaaaaa atacacatca       120
     ggaagacagg agaagaatcc tgcactcaga atgaaatgga tgatggcgat gaaatatccg       180
     atcacagctg acaaaaggat aatggaaatg atccctgaaa ggaatgaaca aggccaaact       240
     ctctggagca aaacaaatga tgctggatca gacagagtga tggtgtcccc tcttgctgtg       300
     acgtggtgga acaggaatgg gccaactaca agcacagttc attatccaaa ggtatacaaa       360
     acatattttg aaaaggtcga aaggttgaaa catggaatct ttggccctgt acacttccgt       420
     aatcaagtca agatacgccg tagggttgac ataaacccag gtcatgctga tcttagtgca       480
     aaagaagcac aagatgtcat catggaggtc gtcttcccaa atgaagttgg agccaggata       540
     ttgacatcag agtcacagtt gacaataaca aaagaaaaga aagaggagct tcaggattgt       600
     aagattgctc ctttaatggt agcatacatg ctagagagag agctggttcg taagaccaga       660
     ttcctaccag tagctggcgg aacaagcagc gtgtatatcg aagtattgca tttgacccag       720
     gggacctgct gggaacagat gtacactcca gggggagagg tgagaaatga tgatgttgac       780
     cagagtttaa tcattgctgc caggaacatt gttagaagag caacagtatc agcagaccca       840
     ttggcttcac tattagagat gtgccatagt acacaaattg gagggacacg gatggtggac       900
     atccttagac aaaacccaac agaagagcaa gccgtggata tatgcaaggc ggcaatgggt       960
     ctaagaatca gctcatcttt cagctttgga ggtttcactt tcaaacgaac aagtgggtca      1020
     tctatcaaaa gagaggagga agtgctcaca ggcaacctcc agacattgaa aataagggta      1080
     catgaaggat atgaggagtt tacaatggtt gggcgaagag caacagccat tctaaggaaa      1140
     gcaaccagaa ggctgatcca actgatagtg agtgggagag atgaacaatc aattgctgaa      1200
     gctatcatcg tagcaatggt attttcacaa gaggattgca tgataaaggc ggtccgaggt      1260
     gatttgaatt tcgtgaacag agcgaaccaa cgactaaatc ccatgcacca actcttgagg      1320
     catttccaga aggatgcaaa agtgttgttc cagaactggg ggattgaacc catcgacaat      1380
     gtcatgggga tgattggaat attgcccgat atgactccca gcacggacat gtcactaagg      1440
     ggagtaagag tgagcaaaat gggagtggat gaatattcta gtactgagag agttgccgtg      1500
     agcattgatc gtttcttgag ggtccgggat cagcagggga atgtgctatt gtcccctgaa      1560
     gaggtcagtg aaacgcaggg aacagaaaag ttgacaataa catattcatc ttccatgatg      1620
     tgggagatta acggtcctga ttcggtatta gttaatacat accaatggat cattaggagt      1680
     tgggagaccg tgaagattca atggtcccaa gacccaacaa tactatacaa taaattggag      1740
     tttgaaccct ttcaatcatt ggtgcccaag gctgctagag gccaatatag tggatttgtg      1800
     agaacactat tccaacaaat gcgtgatgtt ttggggacat tcgacactgt ccaaataata      1860
     aagctactac catttgcagc agccccacct gtgcagagta ggatgcagtt ttcttctcta      1920
     accgtgaatg tgaggggcac tggaatgaga atacttgtga gaggtaattc ccctgtgttt      1980
     aactataaca aggcaaccaa gaggcttaca gtcctcggaa aggatgcagg tgcacttaca      2040
     gaagacccag atgagggagc agcaggagta gagtctgcag tgttgagagg gtttctgatc      2100
     ttgggcaaag aggacaaaag atatggacct gcattgagca tcaatgaatt gggcaatctt      2160
     gcaaaggggg agaaggctaa tgtgttgata gggcaaggag acatagtgtt ggtaatgaaa      2220
     cggaaacggg actccagcat acttactgac agccagacag cgaccaaaag aattcgaatg      2280
     gccatcaatt agtgtcgaat tg                                               2302
//