ID   MZ615188; SV 1; linear; genomic DNA; STD; INV; 354 BP.
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AC   MZ615188;
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DT   27-AUG-2021 (Rel. 144, Created)
DT   27-AUG-2021 (Rel. 144, Last updated, Version 1)
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DE   Apodera angatakere isolate EM2540-19 cytochrome c oxidase subunit 1-like
DE   protein (COI) gene, partial cds; mitochondrial.
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KW   .
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OS   Apodera angatakere
OC   Eukaryota; Amoebozoa; Tubulinea; Elardia; Arcellinida; Difflugina;
OC   Hyalospheniidae; Apodera.
OG   Mitochondrion
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RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-354
RX   PUBMED; 34351666.
RA   Duckert C., Blandenier Q., McKeown M., Hohaia H., Luketa S., Wilmshurst J.,
RA   Lara E., Mitchell E.A.D.;
RT   "Superficially described and ignored for 92 years, rediscovered and
RT   emended: Apodera angatakere (Amoebozoa : Arcellinida : Hyalospheniformes)
RT   is a new flagship testate amoeba taxon from Aotearoa (New Zealand)";
RL   J Eukaryot Microbiol:e12867(2021).
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RN   [2]
RP   1-354
RA   Duckert C., Blandenier Q., McKeown M., Hohaia H., Luketa S., Wilmshurst J.,
RA   Lara E., Mitchell E.A.D.;
RT   ;
RL   Submitted (23-JUL-2021) to the INSDC.
RL   Laboratory of Soil Biodiversity, University of Neuchatel, Rue Emile-Argand
RL   11, Neuchatel 2000, Switzerland
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DR   MD5; d1c268a9ca753ba464786c376709cec9.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..354
FT                   /organism="Apodera angatakere"
FT                   /organelle="mitochondrion"
FT                   /isolate="EM2540-19"
FT                   /mol_type="genomic DNA"
FT                   /country="New Zealand: Mt. Taranaki"
FT                   /lat_lon="39.26 S 174.04 E"
FT                   /isolation_source="peatland; sphagnum mosses"
FT                   /collected_by="Linnea Mitchell"
FT                   /collection_date="03-Oct-2017"
FT                   /PCR_primers="fwd_name: LCO1490,
FT                   fwd_seq:ggtcaacaaatcataaagatattgg, rev_name: HCO2198,
FT                   rev_seq:taaacttcagggtgaccaaaaaatca"
FT                   /note="PCR_primers=rev_name: ApocoxR, rev_seq:
FT                   ccwggatgnccttcaatactact"
FT                   /db_xref="taxon:2870870"
FT   gene            <1..>354
FT                   /gene="COI"
FT                   /note="identical to cytochrome c oxidase subunit 1 (COX);
FT                   likely undergoes RNA editing"
FT   CDS             <1..>354
FT                   /codon_start=2
FT                   /transl_table=4
FT                   /gene="COI"
FT                   /product="cytochrome c oxidase subunit 1-like protein"
FT                   /protein_id="QZD25094.1"
FT                   /translation="TLYLIFGLIAGIIGTLFSVLIRIELAYPGIQILNGNNQLYNVIVT
FT                   AHAFIMIFFMVMPAMIGGFGNWFVPLLIGAPDMAFPRLNNLSFWLLPPSFFLLLMSSFI
FT                   EIGVGTGWTVYHP"
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SQ   Sequence 354 BP; 90 A; 47 C; 63 G; 154 T; 0 other;
     cactttgtat ttaatttttg gtttaattgc aggaattatt ggaactcttt tttctgtatt        60
     aattcgcata gaattagcat atccggggat ccaaatttta aatggtaaca atcagttata       120
     taatgttatt gttactgccc atgcgttcat tatgattttt tttatggtga tgccagctat       180
     gattggtgga tttggtaatt gatttgtacc tttattaata ggggctcctg atatggcttt       240
     tcctcgatta aacaatttaa gtttttgatt gcttccacca tcattttttt tattattgat       300
     gtcaagtttt attgaaattg gtgtaggtac tggttgaaca gtatatcacc ctta             354
//