ID   OGJ05957; SV 1; linear; genomic DNA; WGS; ENV; 1203 BP.
XX
PA   MFVW01000027.1
XX
PR   Project:PRJNA288027;
XX
DT   29-OCT-2016 (Rel. 130, Created)
DT   03-NOV-2016 (Rel. 130, Last updated, Version 2)
XX
DE   Candidatus Nomurabacteria bacterium RIFOXYA1_FULL_35_17 tRNA
DE   2-thiouridine(34) synthase MnmA
XX
KW   WGS.
XX
OS   Candidatus Nomurabacteria bacterium RIFOXYA1_FULL_35_17
OC   Bacteria; Candidatus Nomurabacteria.
XX
RN   [1]
RC   Publication Status: Online-Only
RX   DOI; 10.1038/ncomms13219.
RX   PUBMED; 27774985.
RA   Anantharaman K., Brown C.T., Hug L.A., Sharon I., Castelle C.J.,
RA   Probst A.J., Thomas B.C., Singh A., Wilkins M.J., Karaoz U., Brodie E.L.,
RA   Williams K.H., Hubbard S.S., Banfield J.F.;
RT   "Thousands of microbial genomes shed light on interconnected biogeochemical
RT   processes in an aquifer system";
RL   Nat Commun 7:13219-13219(2016).
XX
RN   [2]
RA   Anantharaman K., Brown C.T., Hug L.A., Sharon I., Castelle C.J.,
RA   Probst A.J., Thomas B.C., Singh A., Wilkins M.J., Karaoz U., Brodie E.L.,
RA   Williams K.H., Hubbard S.S., Banfield J.F.;
RT   ;
RL   Submitted (18-JUL-2016) to the INSDC.
RL   Earth and Planetary Science, University of California, 369 McCone Hall,
RL   Berkeley, CA 94720, USA
XX
DR   MD5; 64036c25a46a2ea1a070d6a55420ecbf.
DR   BioSample; SAMN04314313.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1203
FT                   /organism="Candidatus Nomurabacteria bacterium
FT                   RIFOXYA1_FULL_35_17"
FT                   /environmental_sample
FT                   /mol_type="genomic DNA"
FT                   /country="USA:Rifle, CO"
FT                   /lat_lon="39.54 N 107.78 W"
FT                   /isolation_source="Rifle well CD01 at 16ft depth; 0.1
FT                   micron filter at time point A"
FT                   /collection_date="02-Aug-2012"
FT                   /note="metagenomic; derived from metagenome: subsurface
FT                   metagenome"
FT                   /db_xref="taxon:1801798"
FT   CDS             MFVW01000027.1:9247..10449
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="A2192_02830"
FT                   /product="tRNA 2-thiouridine(34) synthase MnmA"
FT                   /note="Derived by automated computational analysis using
FT                   gene prediction method: Protein Homology."
FT                   /db_xref="GOA:A0A1F6YI10"
FT                   /db_xref="InterPro:IPR004506"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="InterPro:IPR023382"
FT                   /db_xref="UniProtKB/TrEMBL:A0A1F6YI10"
FT                   /inference="EXISTENCE:similar to AA
FT                   sequence:SwissProt:Q5L186.1"
FT                   /protein_id="OGJ05957.1"
FT                   /translation="MTKKVVFVGLSGGVDSAVSATLLKKSGYEVVGVFIKTWHPDFLVC
FT                   NEEEERHDAMRVAAFLDIPFLTFDFESVYKKEVADYMISEYKAGRTPNPDVMCNKEVKF
FT                   GAFFKKAISMGADYVATGHYAISNSWLASFGSLSPRARGALPLGPSACETPKKGKPAIF
FT                   LYKGIDPSKDQSYFLWTLKQEQLSKILFPVGHLNKTEVRKLAKKFNLPVAEKKDSQGIC
FT                   FLGHVDLKEFLKHYIKEKKGKVLNVVGEEIGYHSGAVFNTLGERHGFTVTKKGPNDGAY
FT                   YVVGKDIKKNILTVSQDKDLRNFPTFALGDIGQGTHGSLNFSNLCLALKDVNWISKVPE
FT                   SNKDYTAQIRYHGEFLLCVLKITGKTTAEVIFQKPVLVAPGQSCVIYDKDVCLGGGVVV
FT                   Q"
XX
SQ   Sequence 1203 BP; 384 A; 191 C; 264 G; 364 T; 0 other;
     atgaccaaaa aagtcgtatt tgttgggctt tcgggtggag tggattccgc tgttagcgca        60
     actttattaa agaaatctgg ttatgaagtt gtcggggttt ttataaaaac ttggcaccca       120
     gattttttag tttgcaatga agaagaagaa cgtcatgatg ctatgcgggt ggcagctttt       180
     ttagatattc catttttaac ttttgatttt gaaagtgttt acaaaaaaga agttgcagat       240
     tatatgattt ctgaatacaa agccggcagg acgccgaatc cggacgtaat gtgtaataaa       300
     gaagtaaaat ttggcgcatt tttcaaaaaa gctatctcaa tgggtgcgga ttatgtggcg       360
     acggggcatt acgctatttc aaatagctgg cttgcctctt ttgggtcgct gtctccgcgt       420
     gctcgcggag cgctgcctct cggcccgtcg gcctgcgaga cacccaaaaa aggcaagccc       480
     gctatttttt tatataaggg tattgatcct tccaaagatc aaagttattt tctttggact       540
     ttaaagcagg aacaattaag taagatttta tttccagttg gacatttaaa taaaacggaa       600
     gttcgaaaat tagcaaagaa atttaattta ccggttgcag aaaaaaagga tagtcaggga       660
     atatgttttc ttggtcatgt agatttaaaa gaatttttaa aacattatat aaaagaaaaa       720
     aaaggaaaag tcttaaatgt agtaggcgag gaaataggct atcattctgg ggcagttttt       780
     aatacgcttg gagaaaggca tggttttact gtcacaaaaa aaggtccgaa tgatggagcc       840
     tattatgttg tcggtaaaga tataaagaag aatatattaa cagtatcgca agacaaagat       900
     ttgagaaatt ttcccacctt cgccctcgga gacataggac aggggaccca cggctcctta       960
     aatttctcaa atctttgtct tgctctaaaa gatgtaaatt ggatttcaaa agttccagaa      1020
     tcaaataaag actacacagc ccagattcgt tatcatggag agtttttact atgtgtttta      1080
     aaaataacag gcaaaacaac agctgaagta attttccaaa aaccagtatt agtcgcccct      1140
     ggtcagtctt gtgtcattta tgataaagac gtttgtcttg gtggtggagt tgttgtacaa      1200
     tag                                                                    1203
//