ID   OOC29331; SV 1; linear; genomic DNA; WGS; PRO; 1074 BP.
XX
PA   MTWS01000020.1
XX
PR   Project:PRJNA360417;
XX
DT   01-MAR-2017 (Rel. 132, Created)
DT   01-MAR-2017 (Rel. 132, Last updated, Version 1)
XX
DE   Helicobacter pylori 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
XX
KW   WGS.
XX
OS   Helicobacter pylori
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Helicobacteraceae; Helicobacter.
XX
RN   [1]
RA   Pazos A., Kodaman N., Piazuelo M.B., Romero-Gallo J., Sobota R.S.,
RA   Israel D.A., Bravo L.E., Morgan D.R., Wilson K.T., Correa P., Peek R.M.Jr.,
RA   Williams S.M., Schneider B.G.;
RT   "Draft Genome Sequences of 13 Colombian Helicobacter pylori Strains from
RT   Andean and Pacific Coast Residents";
RL   Unpublished.
XX
RN   [2]
RA   Pazos A., Kodaman N., Piazuelo M.B., Romero-Gallo J., Sobota R.S.,
RA   Israel D.A., Bravo L.E., Morgan D.R., Wilson K.T., Correa P., Peek R.M.Jr.,
RA   Williams S.M., Schneider B.G.;
RT   ;
RL   Submitted (23-JAN-2017) to the INSDC.
RL   Medicine, Vanderbilt University Medical Center, 2215 Garland Avenue, 1030B
RL   MRB4, Nashville, TN 37232, USA
XX
DR   MD5; a88b439ed3e665fbe24154e1f2b4474a.
DR   BioSample; SAMN06251160.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1074
FT                   /organism="Helicobacter pylori"
FT                   /host="Homo sapiens"
FT                   /strain="SV397_2"
FT                   /mol_type="genomic DNA"
FT                   /country="Colombia:Tuquerres"
FT                   /lat_lon="1.09 N 77.62 W"
FT                   /isolation_source="gastric antrum biopsy"
FT                   /collected_by="Universidad del Valle"
FT                   /collection_date="May-2009"
FT                   /note="genotype: CagA+"
FT                   /db_xref="taxon:210"
FT   CDS             MTWS01000020.1:23096..24169
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /locus_tag="BZK22_06925"
FT                   /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
FT                   RlmN"
FT                   /note="Derived by automated computational analysis using
FT                   gene prediction method: Protein Homology."
FT                   /db_xref="GOA:A0A1V3B6J8"
FT                   /db_xref="InterPro:IPR004383"
FT                   /db_xref="InterPro:IPR007197"
FT                   /db_xref="InterPro:IPR013785"
FT                   /db_xref="InterPro:IPR027492"
FT                   /db_xref="InterPro:IPR040072"
FT                   /db_xref="UniProtKB/TrEMBL:A0A1V3B6J8"
FT                   /inference="COORDINATES:similar to AA
FT                   sequence:RefSeq:NP_208219.1"
FT                   /protein_id="OOC29331.1"
FT                   /translation="MKASIYDFTLDELSQLLKPSFRAKQLYLWLYAKYKTSFKDMQNNF
FT                   SKDFIAYLEQEFTLRTIEIAHVRESVDGSKKYLFKSLRDNHTFEAVLLKMKDKKIDEET
FT                   NAVLEGEKYTVCVSCQIGCQVGCSFCFTQKGGFVRDLKASEIIQQALLIKEDNNLPIEK
FT                   ALNIVFMGMGEPLNNLDEVCKAIEIFNTGMQISPKRITISTSGVADKIPILAGKNLGVQ
FT                   LAISLHAVDDKTRSSLMPLNKKYNIECVLNEVRKWPLEQRKRVMFEYLLIKDLNDSLDC
FT                   AKKLLKLLNGIKSKVNLILFNPHEGSKFERPSLESARMFADFLNAKGLLCTIRESKALD
FT                   IEAACGQLREKKLQQKI"
XX
SQ   Sequence 1074 BP; 351 A; 186 C; 236 G; 301 T; 0 other;
     atgaaggcta gtatttatga tttcacttta gatgaattga gccaactttt aaaaccaagt        60
     tttagggcta aacagcttta tttgtggctc tatgcgaagt ataaaacaag ctttaaagac       120
     atgcaaaata atttttcaaa agactttatc gcttatttgg agcaggaatt tactttgcgc       180
     acgatagaaa tcgcgcatgt gagggagagc gttgatggct ctaaaaaata cctttttaaa       240
     tctttaaggg acaaccacac ttttgaagcg gtgttgttga aaatgaaaga caaaaagatt       300
     gatgaagaga cgaacgccgt tttagagggg gaaaaataca ccgtgtgcgt gtcttgtcaa       360
     atcggctgtc aagtgggttg ctcgttttgt ttcactcaaa aaggcggttt tgtaagggat       420
     ctcaaagcga gcgagattat ccagcaagcc ctactcatta aagaggacaa taacctcccc       480
     attgaaaaag cgctcaacat tgtttttatg ggaatgggcg agcctttgaa caatttagat       540
     gaggtgtgta aggcgattga aatttttaat accggcatgc aaatttcacc caaaaggatc       600
     accatttcca cgagcggcgt agccgataaa atccccattt tagcgggcaa aaatttaggc       660
     gtgcaattag ctatatcctt acacgccgta gatgataaaa cgcgctcgtc tttaatgccc       720
     ttgaataaaa aatacaacat tgaatgcgtt ttgaatgaag tgaggaaatg gcctttagag       780
     cagcgcaaaa gagtgatgtt tgaatacctt ttgattaaag atctaaacga tagcctggat       840
     tgcgctaaaa aacttttaaa acttttaaac ggcattaaat ccaaagtgaa tttgatttta       900
     ttcaacccgc atgaaggctc taagtttgaa cgccctagct tagagagcgc cagaatgttt       960
     gcggattttt taaacgccaa aggcttatta tgcaccatta gagagtctaa agctttggat      1020
     attgaagcgg cttgcgggca attgagggag aaaaagctcc agcagaaaat ttaa            1074
//