ID OOC29331; SV 1; linear; genomic DNA; WGS; PRO; 1074 BP. XX PA MTWS01000020.1 XX PR Project:PRJNA360417; XX DT 01-MAR-2017 (Rel. 132, Created) DT 01-MAR-2017 (Rel. 132, Last updated, Version 1) XX DE Helicobacter pylori 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN XX KW WGS. XX OS Helicobacter pylori OC Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; OC Helicobacteraceae; Helicobacter. XX RN [1] RA Pazos A., Kodaman N., Piazuelo M.B., Romero-Gallo J., Sobota R.S., RA Israel D.A., Bravo L.E., Morgan D.R., Wilson K.T., Correa P., Peek R.M.Jr., RA Williams S.M., Schneider B.G.; RT "Draft Genome Sequences of 13 Colombian Helicobacter pylori Strains from RT Andean and Pacific Coast Residents"; RL Unpublished. XX RN [2] RA Pazos A., Kodaman N., Piazuelo M.B., Romero-Gallo J., Sobota R.S., RA Israel D.A., Bravo L.E., Morgan D.R., Wilson K.T., Correa P., Peek R.M.Jr., RA Williams S.M., Schneider B.G.; RT ; RL Submitted (23-JAN-2017) to the INSDC. RL Medicine, Vanderbilt University Medical Center, 2215 Garland Avenue, 1030B RL MRB4, Nashville, TN 37232, USA XX DR MD5; a88b439ed3e665fbe24154e1f2b4474a. DR BioSample; SAMN06251160. XX FH Key Location/Qualifiers FH FT source 1..1074 FT /organism="Helicobacter pylori" FT /host="Homo sapiens" FT /strain="SV397_2" FT /mol_type="genomic DNA" FT /country="Colombia:Tuquerres" FT /lat_lon="1.09 N 77.62 W" FT /isolation_source="gastric antrum biopsy" FT /collected_by="Universidad del Valle" FT /collection_date="May-2009" FT /note="genotype: CagA+" FT /db_xref="taxon:210" FT CDS MTWS01000020.1:23096..24169 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="BZK22_06925" FT /product="23S rRNA (adenine(2503)-C(2))-methyltransferase FT RlmN" FT /note="Derived by automated computational analysis using FT gene prediction method: Protein Homology." FT /db_xref="GOA:A0A1V3B6J8" FT /db_xref="InterPro:IPR004383" FT /db_xref="InterPro:IPR007197" FT /db_xref="InterPro:IPR013785" FT /db_xref="InterPro:IPR027492" FT /db_xref="InterPro:IPR040072" FT /db_xref="UniProtKB/TrEMBL:A0A1V3B6J8" FT /inference="COORDINATES:similar to AA FT sequence:RefSeq:NP_208219.1" FT /protein_id="OOC29331.1" FT /translation="MKASIYDFTLDELSQLLKPSFRAKQLYLWLYAKYKTSFKDMQNNF FT SKDFIAYLEQEFTLRTIEIAHVRESVDGSKKYLFKSLRDNHTFEAVLLKMKDKKIDEET FT NAVLEGEKYTVCVSCQIGCQVGCSFCFTQKGGFVRDLKASEIIQQALLIKEDNNLPIEK FT ALNIVFMGMGEPLNNLDEVCKAIEIFNTGMQISPKRITISTSGVADKIPILAGKNLGVQ FT LAISLHAVDDKTRSSLMPLNKKYNIECVLNEVRKWPLEQRKRVMFEYLLIKDLNDSLDC FT AKKLLKLLNGIKSKVNLILFNPHEGSKFERPSLESARMFADFLNAKGLLCTIRESKALD FT IEAACGQLREKKLQQKI" XX SQ Sequence 1074 BP; 351 A; 186 C; 236 G; 301 T; 0 other; atgaaggcta gtatttatga tttcacttta gatgaattga gccaactttt aaaaccaagt 60 tttagggcta aacagcttta tttgtggctc tatgcgaagt ataaaacaag ctttaaagac 120 atgcaaaata atttttcaaa agactttatc gcttatttgg agcaggaatt tactttgcgc 180 acgatagaaa tcgcgcatgt gagggagagc gttgatggct ctaaaaaata cctttttaaa 240 tctttaaggg acaaccacac ttttgaagcg gtgttgttga aaatgaaaga caaaaagatt 300 gatgaagaga cgaacgccgt tttagagggg gaaaaataca ccgtgtgcgt gtcttgtcaa 360 atcggctgtc aagtgggttg ctcgttttgt ttcactcaaa aaggcggttt tgtaagggat 420 ctcaaagcga gcgagattat ccagcaagcc ctactcatta aagaggacaa taacctcccc 480 attgaaaaag cgctcaacat tgtttttatg ggaatgggcg agcctttgaa caatttagat 540 gaggtgtgta aggcgattga aatttttaat accggcatgc aaatttcacc caaaaggatc 600 accatttcca cgagcggcgt agccgataaa atccccattt tagcgggcaa aaatttaggc 660 gtgcaattag ctatatcctt acacgccgta gatgataaaa cgcgctcgtc tttaatgccc 720 ttgaataaaa aatacaacat tgaatgcgtt ttgaatgaag tgaggaaatg gcctttagag 780 cagcgcaaaa gagtgatgtt tgaatacctt ttgattaaag atctaaacga tagcctggat 840 tgcgctaaaa aacttttaaa acttttaaac ggcattaaat ccaaagtgaa tttgatttta 900 ttcaacccgc atgaaggctc taagtttgaa cgccctagct tagagagcgc cagaatgttt 960 gcggattttt taaacgccaa aggcttatta tgcaccatta gagagtctaa agctttggat 1020 attgaagcgg cttgcgggca attgagggag aaaaagctcc agcagaaaat ttaa 1074 //