ID RMX25764; SV 1; linear; genomic DNA; WGS; PRO; 3636 BP. XX PA PTLS01000022.1 XX PR Project:PRJNA434601; XX DT 13-NOV-2018 (Rel. 138, Created) DT 13-NOV-2018 (Rel. 138, Last updated, Version 1) XX DE Lactobacillus reuteri DNA-directed RNA polymerase subunit beta' XX KW WGS. XX OS Lactobacillus reuteri OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; OC Lactobacillus. XX RN [1] RA Ozcam M., Roos S., Van Pijkeren J.P.; RT "The gut symbionts Lactobacillus reuteri R2lc and 2010 encode a polyketide RT synthase cluster that activates the mammalian aryl-hydrocarbon receptor"; RL J Appl Environ Microbiol 0:. XX RN [2] RA Ozcam M., Van Pijkeren J.P.; RT ; RL Submitted (19-FEB-2018) to the INSDC. RL Department of Food Science, University of Wisconsin-Madison, 1605 Linden RL Drive, Madison, WI 53705, USA XX DR MD5; f8b5423621658cecc66c3e9cab33e842. DR BioSample; SAMN08565493. XX FH Key Location/Qualifiers FH FT source 1..3636 FT /organism="Lactobacillus reuteri" FT /host="rat" FT /strain="R2lc" FT /mol_type="genomic DNA" FT /db_xref="taxon:1598" FT CDS PTLS01000022.1:74002..77637 FT /codon_start=1 FT /transl_table=11 FT /gene="rpoC" FT /locus_tag="C5O77_03610" FT /product="DNA-directed RNA polymerase subunit beta'" FT /note="Derived by automated computational analysis using FT gene prediction method: Protein Homology." FT /inference="COORDINATES:similar to AA FT sequence:RefSeq:WP_016496592.1" FT /protein_id="RMX25764.1" FT /translation="MIDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKQG FT LFDERIFGPTKDYECACGKYKRIRYKGRVCDRCGVEVTSAKVRRERMGHIELAAPVSHI FT WYFKGIPSRMGLVLDMSPRSLEEVIYFASYVVLDPGDTPLEKKQLLTEAEYRDKKAEYG FT DRFKAEMGAAAIQKLLADVDLEKEAAELKEELKEATGQKRTRAIRRLDILEAFIKSGNK FT PEWMVMDVIPVMPPDLRPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLKLQAPGIIV FT QNEKRMLQEAVDALIDNGRRGRPVAGPGNRPLKSLSHLLKGKQGRFRQNLLGKRVDYSG FT RSVIDVGPSLKLNQMGLPVPMALELFKPFIMHELVKRGLSANVKAAKRKIDRSDDDVFD FT VLEDVIKEHPVLLNRAPTLHRLGIQAFEPILVSGKSMRLHPLVCSAYNADFDGDQMAIH FT VPLSDEAQAEARLLMLAAHHILSPRDGEPIVSPSQDMVIGNYYMTTEDKGREGEGMIFK FT DTDEAELAYRNDYVSLQTRVGVQVSAFPEKPFTDEQRGKIMVTTVGKLLFNRIMPKDFA FT YINEPTDANIQNGVDDRFFLEPGQDIHEYLENAPLVPPFKKGFLSDLIAEVYKRYKVTK FT TSQFLDRIKDLGYYESTISGLTTAMSDIHDLPEKPEILDKAQKQVALITKQFRRGLITD FT DERYERVIGAWNDAKDEVQNKLIEHMDIHNPINMMSDSGARGNISNFTQLAGMRGLMAS FT PNGKIMELPVKSNFYEGLSVLEMFISSHGARKGMTDTALKTANSGYLTRRLVDVAQDVV FT VREKDCGTDRGLEVTAITNGNEMIEPLYDRIMGRYTMKSVFDPKTGEKIVGKNVLIDEE FT MAQKIVDAGVKKVTIRSAFTCNTEHGVCERCYGRNAATGDRVEAGEAVGTVAAQSIGEP FT GTQLTLRNFHTGGVAGNDDITQGLPRIQEIVEARNPKGRATITEVTGEVVSIEENPAER FT TKDITIKGETDTRTYTLPITARMKVAEGDFIHRGAPLNEGSIDPKELIQVRDVLSTETY FT LLSQVQGVYRMQGIDLLDKHVEIMIRQMMRKVRVMDPGDTDLLPGQLMDISQFRDANKD FT TLVAGNIPATARPVILGITKAALETNSFLSAASFQETTRVLTDAAIRGKNDPLVGLKEN FT VIIGKIIPAGTGMSAYRNIKPKEVSVAAYSIKDIEAKLKEEDKQN" XX SQ Sequence 3636 BP; 1084 A; 665 C; 812 G; 1075 T; 0 other; ttgattgatg tcaataaatt tgaaagtatg cagatcggtc tggcatctcc agataagatc 60 cgtagttggt catatgggga agttaaaaag cccgagacta ttaactaccg gacattaaag 120 ccagaaaagc aaggtctgtt tgacgaacga atctttggcc caaccaagga ttacgaatgt 180 gcgtgtggaa agtacaagcg tatccgttac aaaggtcgtg tttgtgaccg ttgtggtgtt 240 gaggttacta gtgcaaaagt tcgtcgtgaa cggatggggc acattgaatt agctgctcct 300 gtatctcaca tttggtactt taaaggaatt ccaagtcgaa tgggacttgt attagatatg 360 agtccacgtt cgcttgaaga agttatctac tttgcttcat atgttgttct tgatccaggt 420 gatactccac ttgaaaagaa acaactttta actgaagctg aatatcgtga taaaaaagca 480 gaatatggtg accgtttcaa agctgaaatg ggagctgctg ctattcaaaa acttttagct 540 gatgttgact tagaaaaaga agctgctgaa ttaaaagaag aattgaaaga agccactggt 600 caaaaacgga ctcgtgctat tcgtcgtctt gatattcttg aagctttcat taagtcagga 660 aacaagcctg aatggatggt tatggatgta attccagtta tgccacctga cttgcggcca 720 atggttcaac ttgaaggggg acgttttgct acctccgatt tgaacgattt atatcggcgg 780 gttattaacc gtaataaccg attaaaacga cttcttaaat tacaagcacc tggaattatt 840 gttcaaaatg aaaaacggat gcttcaagaa gcggttgatg cattaatcga taatggtcgc 900 cgcggacgtc cagtagctgg accaggtaac cgtccattga agtcactttc tcacttactt 960 aagggtaagc aaggacgttt ccgtcaaaac ttgctaggta agcgtgttga ctactctggt 1020 cgttctgtta ttgatgttgg tccatcattg aagttgaacc aaatgggatt accagttcca 1080 atggcacttg aattattcaa gccatttatt atgcatgaat tggtaaagcg tggtctttcc 1140 gctaacgtta aagctgctaa gcgtaagatt gatcgtagtg atgatgatgt ctttgatgta 1200 ttggaagacg ttattaagga acacccagtt ctattgaacc gggcccctac tcttcaccgg 1260 ttaggtatcc aagcgttcga accaatcttg gtttccggta agtcaatgcg tcttcaccca 1320 ttagtatgtt cagcatataa cgctgacttt gatggggacc agatggctat tcacgttcca 1380 ttatctgatg aagctcaagc ggaagcacgt ttgttaatgc ttgctgctca ccatattctt 1440 agtcctcgtg acggagaacc tattgtttca ccatcacagg atatggttat tggtaactac 1500 tacatgacta ctgaagataa gggtcgtgaa ggtgaaggaa tgatcttcaa ggatactgat 1560 gaagctgaac ttgcttaccg caatgactat gtttcattac aaacgcgtgt tggagttcaa 1620 gtatctgcat tccctgaaaa gccatttact gatgaacaac gaggcaagat catggtgaca 1680 actgttggta agcttctttt caaccgaatt atgccaaaag attttgctta cattaacgaa 1740 ccaacagatg caaatattca aaatggtgtt gatgatcgtt tcttccttga acctggtcaa 1800 gatatccatg aataccttga aaatgcacca ttagttccac catttaagaa gggcttccta 1860 tctgacttga tcgctgaagt atataagcgt tacaaagtta caaagacgtc ccaattctta 1920 gaccgtatta aggacttagg ttactacgaa tcaactattt ctggtttaac tactgctatg 1980 tctgatattc atgatttacc agaaaaacca gaaattcttg ataaggcaca aaagcaagtt 2040 gctttaatta ctaagcaatt ccgtcgtggt ttaattacag acgacgaacg ttatgaacga 2100 gtaatcggtg catggaacga tgctaaggat gaagttcaaa acaagttaat tgaacacatg 2160 gatatccata acccaattaa tatgatgtcc gactctggtg cgcggggtaa catttcaaac 2220 tttactcagt tagccggaat gcgtggattg atggcatcac caaacggtaa gattatggaa 2280 ttacctgtta agtcaaactt ctatgaagga ctttcagtgt tggaaatgtt tatttcatca 2340 cacggtgctc gtaaaggtat gactgataca gccttgaaga ctgccaactc aggttactta 2400 actcgtcgtc ttgttgatgt tgcgcaagat gtggttgttc gtgaaaaaga ctgtggtact 2460 gatcgtggac ttgaagttac tgctattacg aacggtaacg aaatgattga accactttat 2520 gatcggatca tgggtcgtta cactatgaag tctgtctttg atcctaagac tggtgaaaag 2580 attgttggta aaaatgttct tatcgacgaa gaaatggcgc aaaagatcgt tgatgcagga 2640 gtaaagaaag taactattcg ttcagcattt acttgtaaca ctgaacacgg tgtatgtgaa 2700 cgttgttacg gacggaacgc agccactggt gaccgtgtag aagctggtga agctgttgga 2760 actgttgccg ctcaatcaat tggtgaacca ggtactcagt taacacttcg taacttccac 2820 actggtgggg ttgctggtaa cgatgatatt actcaaggtc ttcctcgtat tcaagaaatt 2880 gttgaagcac gtaatcctaa aggtcgtgca acaattacag aggttactgg tgaagttgta 2940 tctattgaag aaaatcctgc tgaacggact aaagatatta cgattaaggg tgaaactgat 3000 acccgaactt acacacttcc aattacggca cgaatgaaag ttgctgaagg tgactttatt 3060 caccgtggcg caccgttaaa tgaaggttcg attgatccta aggaattaat ccaggttcgt 3120 gatgtccttt ctactgaaac ttacctctta tcacaagttc aaggtgttta ccggatgcag 3180 ggtattgatt tgttagataa gcacgttgaa attatgattc gtcagatgat gcggaaagtt 3240 cgtgttatgg atccaggtga taccgatctt ctacctggtc aattaatgga tatcagtcaa 3300 ttccgtgatg ctaacaagga tacattagtt gccggtaata ttcctgcaac cgctcgtcca 3360 gttattcttg gtattactaa ggccgccttg gagacaaata gtttcttatc agctgcttca 3420 ttccaagaaa ctacacgtgt attaactgat gctgctattc gtggtaagaa tgatccatta 3480 gttggattga aagaaaatgt tattattggt aagattattc ctgcaggtac tggtatgagt 3540 gcttaccgga acattaagcc aaaagaagtt agtgtagctg cttactcaat taaagatatt 3600 gaggctaagt taaaagaaga agataagcaa aactaa 3636 //