GCA_000182315.2 ASM18231v2 ASM18231v2 assembly for Saccharomyces cerevisiae JAY291 The <a href="http://bioinfo03.ibi.unicamp.br/levedura/">Duke University Medical Center</a> is sequencing the <i>Saccharomyces cerevisiae</i> strain JAY291 genome at 165X genome coverage (12X of 454 reads, 58X of Solexa single end reads, and 95X of Solexa paired-end reads)using whole genome shotgun (WGS) sequencing. <p> Strain JAY291 is a haploid spore from the industrial diploid strain JAY270. JAY270 and related strains are widely used in Brazil for bioethanol production from sugarcane feedstock. This strain combines high productivity in bioethanol fermentation with an extraordinary ability to tolerate stress and to outcompete microbial contaminants, dominating the microbial population in the industrial setting and thus ensuring an efficient and stable fermentation for several months.<br/><p><b>Comment</b><br/>Contigs ACFL01000006 and ACFL01000239 updated by PCR sequences ASM18231v2 scaffold full 574961 Saccharomyces cerevisiae JAY291 JAY291 SAMN02953746 PRJNA32809 ACFL 01 MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion MT Mitochondrion VI Chromosome ftp://ftp.ebi.ac.uk/pub/databases/ena/wgs/public/acf/ACFL01.dat.gz ftp://ftp.ebi.ac.uk/pub/databases/ena/wgs/public/acf/ACFL01.fasta.gz total-length 11538054 ungapped-length 11538040 n50 64336 spanned-gaps 1 unspanned-gaps 0 scaffold-count 453 count-contig 454 contig-n50 64336 contig-L50 57 contig-n75 36570 contig-n90 17092 scaf-L50 57 scaf-n75 36570 scaf-n90 17110 replicon-count 2 count-non-chromosome-replicon 1 count-alt-loci-units 0 count-regions 0 count-patches 0 ENA-LAST-UPDATED 2022-12-06
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<TITLE>ASM18231v2 assembly for Saccharomyces cerevisiae JAY291</TITLE>
<DESCRIPTION>The <a href="http://bioinfo03.ibi.unicamp.br/levedura/">Duke University Medical Center</a> is sequencing the <i>Saccharomyces cerevisiae</i> strain JAY291 genome at 165X genome coverage (12X of 454 reads, 58X of Solexa single end reads, and 95X of Solexa paired-end reads)using whole genome shotgun (WGS) sequencing. <p> Strain JAY291 is a haploid spore from the industrial diploid strain JAY270. JAY270 and related strains are widely used in Brazil for bioethanol production from sugarcane feedstock. This strain combines high productivity in bioethanol fermentation with an extraordinary ability to tolerate stress and to outcompete microbial contaminants, dominating the microbial population in the industrial setting and thus ensuring an efficient and stable fermentation for several months.<br/><p><b>Comment</b><br/>Contigs ACFL01000006 and ACFL01000239 updated by PCR sequences</DESCRIPTION>
<NAME>ASM18231v2</NAME>
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<SCIENTIFIC_NAME>Saccharomyces cerevisiae JAY291</SCIENTIFIC_NAME>
<STRAIN>JAY291</STRAIN>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
<TYPE>Mitochondrion</TYPE>
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<NAME>MT</NAME>
<TYPE>Mitochondrion</TYPE>
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<NAME>MT</NAME>
<TYPE>Mitochondrion</TYPE>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
<TYPE>Mitochondrion</TYPE>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
<TYPE>Mitochondrion</TYPE>
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<NAME>MT</NAME>
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<NAME>MT</NAME>
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<NAME>VI</NAME>
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