<IDENTIFIERS>
<PRIMARY_ID>GCA_003221495.1</PRIMARY_ID>
<SUBMITTER_ID namespace="Jill Banfield's Lab at Berkeley">ASM322149v1</SUBMITTER_ID>
...</IDENTIFIERS>
<TITLE>ASM322149v1 assembly for Candidatus Rokuibacteriota bacterium</TITLE>
<DESCRIPTION>Metagenomes and assembled genomes binned from metagenomes for 60 soil samples across multiple soil plots from a meadow in the Angelo Coastal Range Reserve, CA. This location is part of an on-going climate change experiment where some meadow plots have received additional rainfall via a sprinkler system since 2001. Soil samples were taken and sequenced from three depths (10-20 cm, 20-30 cm, and 30-40 cm) and from plots that have both received additional rainfall and control plots that have received ambient rainfall.<br/><p><b>Comment</b><br/>Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/</DESCRIPTION>
<NAME>ASM322149v1</NAME>
<ASSEMBLY_LEVEL>scaffold</ASSEMBLY_LEVEL>
<GENOME_REPRESENTATION>full</GENOME_REPRESENTATION>
<TAXON>
<TAXON_ID>2053607</TAXON_ID>
<SCIENTIFIC_NAME>Candidatus Rokuibacteriota bacterium</SCIENTIFIC_NAME>
...</TAXON>
<SAMPLE_REF>
<IDENTIFIERS>
<PRIMARY_ID>SAMN08911941</PRIMARY_ID>
...</IDENTIFIERS>
...</SAMPLE_REF>
<STUDY_REF>
<IDENTIFIERS>
<PRIMARY_ID>PRJNA449266</PRIMARY_ID>
...</IDENTIFIERS>
...</STUDY_REF>
<WGS_SET>
<PREFIX>QHSH</PREFIX>
<VERSION>01</VERSION>
...</WGS_SET>
<ASSEMBLY_LINKS>
<ASSEMBLY_LINK>
<URL_LINK>
<LABEL>WGS_SET_FLATFILE</LABEL>
<URL>ftp://ftp.ebi.ac.uk/pub/databases/ena/wgs/public/qhs/QHSH01.dat.gz</URL>
...</URL_LINK>
...</ASSEMBLY_LINK>
<ASSEMBLY_LINK>
<URL_LINK>
<LABEL>WGS_SET_FASTA</LABEL>
<URL>ftp://ftp.ebi.ac.uk/pub/databases/ena/wgs/public/qhs/QHSH01.fasta.gz</URL>
...</URL_LINK>
...</ASSEMBLY_LINK>
...</ASSEMBLY_LINKS>
<ASSEMBLY_ATTRIBUTES>
<ASSEMBLY_ATTRIBUTE>
<TAG>total-length</TAG>
<VALUE>5420270</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>ungapped-length</TAG>
<VALUE>5417463</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>n50</TAG>
<VALUE>15377</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>spanned-gaps</TAG>
<VALUE>42</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>unspanned-gaps</TAG>
<VALUE>0</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>scaffold-count</TAG>
<VALUE>510</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>count-contig</TAG>
<VALUE>552</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>contig-n50</TAG>
<VALUE>14576</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>contig-L50</TAG>
<VALUE>115</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>contig-n75</TAG>
<VALUE>8158</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>contig-n90</TAG>
<VALUE>4509</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>scaf-L50</TAG>
<VALUE>107</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>scaf-n75</TAG>
<VALUE>8520</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>scaf-n90</TAG>
<VALUE>5092</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>replicon-count</TAG>
<VALUE>0</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>count-non-chromosome-replicon</TAG>
<VALUE>0</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>count-alt-loci-units</TAG>
<VALUE>0</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>count-regions</TAG>
<VALUE>0</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>count-patches</TAG>
<VALUE>0</VALUE>
...</ASSEMBLY_ATTRIBUTE>
<ASSEMBLY_ATTRIBUTE>
<TAG>ENA-LAST-UPDATED</TAG>
<VALUE>2018-06-12</VALUE>
...</ASSEMBLY_ATTRIBUTE>
...</ASSEMBLY_ATTRIBUTES>