Project: PRJEB55386
Human Pangenome Reference Consortium (HPRC) BioProject for Minigraph pangenomes that use GRCh38 as the reference sequence. Minigraph is a generalization of minimap2 which builds graphs with iterative construction. Minigraph aligns with approximate locations and can be used to call structural variants (>50nt).
The pangenome included in this data BioProject was constructed with GRCh38 (included as the reference assembly) and CHM13 as well as 88 assemblies from the HPRC.
Secondary Study Accession:
ERP140277
Study Title:
HPRC Pangenomes: Minigraph (GRCh38-Based)
Center Name:
university of California, Santa Cruz Genomics Institute
Study Name:
Human Pangenome Reference Consortium Pangenomes Built With Minigraph (GRCh38-Based)
Assembly Graph:
ERZ12792760
ENA-FIRST-PUBLIC:
2022-08-15
ENA-LAST-UPDATE:
2022-10-06
General