Project: PRJNA376772
Spider silk synthesis is an emerging model for the evolution of tissue-specific gene expression and the role of gene duplication in functional novelty, but its potential has not been fully realized. Accordingly, we quantified transcript (mRNA) abundance in seven silk gland types and three non-silk gland tissues for three cobweb-weaving spider species. Evolutionary analyses based on expression levels of thousands of homologous transcripts and phylogenetic reconstruction of 605 gene families demonstrated conservation of expression for each gland type among species. Despite serial homology of all silk glands, the expression profiles of the glue-forming aggregate glands were divergent from fiber-forming glands. Also surprising was our finding that shifts in gene expression among silk gland types were not necessarily coupled with gene duplication, even though silk-specific genes belong to multi-paralog gene families. Our results challenge widely accepted models of tissue specialization and significantly advance efforts to replicate silk-based high-performance biomaterials. Overall design: We isolated mRNA from seven types of silk glands and three non-silk gland tissues for three species of cobweb weaving spiders. We aimed for two replicate isolations of each tissue, but failed to obtain sufficient material for all tissue types for each species. Each replicate RNA isolate included tissue from 8-29 individuals.
Secondary Study Accession:
SRP100704
Study Title:
Gene expression profiling of multiple tissue types from three species of cobweb weaving spiders
Center Name:
Biology, Washington and Lee University
Study Name:
Gene expression profiling of multiple tissue types from three species of cobweb weaving spiders
ENA-REFSEQ:
N
PROJECT-ID:
376772
ENA-FIRST-PUBLIC:
2017-08-25
ENA-LAST-UPDATE:
2023-05-19
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