Introduction

The Epigenome Reference Registry, aka EpiRR, serves as a registry for datasets grouped in reference epigenomes and their respective metadata, including direct links to the raw data in public sequence archives. IHEC reference epigenomes must meet the minimum the criteria listed here and any associated metadata should comply with the IHEC specifications described here.

Accessing EpiRR data

EpiRR REST API provides language agnostic bindings to the EpiRR data, which you can access from https://www.ebi.ac.uk/epirr/docs

EpiRR Submissions

Submissions to EpiRR can be arranged by contacting epirr@ebi.ac.uk. Submissions are accepted as either JSON or custom text format files, where one file must be used per reference epigenome. For more information on EpiRR submissions, please visit the EpiRR Github repository .

Data Summary


Project Complete Partial Total
AMED-CREST 20 258 278
BLUEPRINT 112 1137 1249
CEEHRC 144 342 486
DEEP 54 103 157
ENCODE 96 119 215
EpiHK 1 18 19
GIS 0 291 291
Korea Epigenome Project (KNIH) 0 37 37
NIH Roadmap Epigenomics 27 120 147