IHECRE00001795.1 PREVIOUS JSON
| Type | Single donor |
| Status | Partial |
| Project | ENCODE |
| Description | Reference epigenome for mouse forebrain (embryonic 12.5 day). |
| Live version | IHECRE00001795.7 |
Metadata
| Biomaterial type | tissue |
| Health state | healthy |
| Donor id | ENCDO956IXV |
| Age | 12.5 day |
| Link | Protocol document; https://www.encodeproject.org/documents/a2b93f76-f042-4d86-b9c5-161973f1409c/@@download/attachment/Tissue_Excision_Protocol_022315.pdf |
| Tissue type | forebrain |
| Taxon id | 10090 |
| Species | Mus musculus |
| Sex | pooled male and female |
| Lab | Len Pennacchio, LBNL |
| Dev stage | embryonic |
Raw data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| RNA-Seq | mRNA-Seq | GEO | GSM2192081 | None | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2192081 |
| RNA-Seq | mRNA-Seq | GEO | GSM2192082 | None | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2192082 |
| Bisulfite-Seq | DNA Methylation | GEO | GSM2190924 | None | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2190924 |
| Bisulfite-Seq | DNA Methylation | GEO | GSM2190925 | None | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2190925 |
| Bisulfite-Seq | DNA Methylation | GEO | GSM2190926 | None | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2190926 |
| Bisulfite-Seq | DNA Methylation | GEO | GSM2190927 | None | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM2190927 |