IHECRE00004635.1 PREVIOUS JSON  


Type Single donor
Status Complete
Project ENCODE
Description Reference epigenome for human H9-derived smooth muscle cell
Live version IHECRE00004635.6

Metadata


Biomaterial type Cell Line
Disease ontology uri http://ncit.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=C115935&ns=NCI_Thesaurus
Differentiation stage unknown
Differentiation method unknown
Passage unknown
Medium unknown
Line smooth muscle cell
Taxon id 9606
Species Homo sapiens
Sex Female
Disease Healthy
Sample ontology uri http://purl.obolibrary.org/obo/CL:0000192
Lineage mesoderm
Batch unknown
Biomaterial provider Southeast Stem Cell Consortium

Raw data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
RNA-Seq RNA-Seq ENCODE ENCSR236URT None https://www.encodeproject.org/experiments/ENCSR236URT
ChIP-Seq ChIP-Seq Input: Transcription factor CTCF ENCODE ENCSR261VAS None https://www.encodeproject.org/experiments/ENCSR261VAS
RNA-Seq RNA-Seq ENCODE ENCSR250STJ None https://www.encodeproject.org/experiments/ENCSR250STJ
ChIP-Seq ChIP-Seq Input ENCODE ENCSR729MRJ None https://www.encodeproject.org/experiments/ENCSR729MRJ
ChIP-Seq Histone H3K27me3 ENCODE ENCSR143RMH None https://www.encodeproject.org/experiments/ENCSR143RMH
ChIP-Seq Histone H3K36me3 ENCODE ENCSR651JDA None https://www.encodeproject.org/experiments/ENCSR651JDA
ChIP-Seq Histone H3K4me1 ENCODE ENCSR130IMV None https://www.encodeproject.org/experiments/ENCSR130IMV
ChIP-Seq Histone H3K4me3 ENCODE ENCSR515PKY None https://www.encodeproject.org/experiments/ENCSR515PKY
ChIP-Seq Histone H3K27ac ENCODE ENCSR210ZPC None https://www.encodeproject.org/experiments/ENCSR210ZPC
ChIP-Seq Histone H3K9me3 ENCODE ENCSR090QTV None https://www.encodeproject.org/experiments/ENCSR090QTV
RNA-Seq RNA-Seq ENCODE ENCSR052FJA None https://www.encodeproject.org/experiments/ENCSR052FJA
RNA-Seq RNA-Seq ENCODE ENCSR155LSV None https://www.encodeproject.org/experiments/ENCSR155LSV
Bisulfite-Seq DNA Methylation ENCODE ENCSR076OHG None https://www.encodeproject.org/experiments/ENCSR076OHG