GWAS Catalog

Variant: rs960709

Variant information

Location

5:151081488

Cytogenetic region

Most severe consequence

Intron variant

Mapped gene(s)

Alleles

-

Minor allele

-

MAF

-

GWAS Catalog data is currently mapped to Genome Assembly GRCh38.p14 and dbSNP Build156

Available data:

Associations 11

Show entries

Variant and risk allele	P-value	P-value annotation	RAF	OR	Beta	CI	Mapped gene	Reported trait	Trait(s)	Background trait(s)	Study accession	Location

rs960709-G	7 x 10^-16	-	0.2382	-	0.03412575 unit decrease	[0.026-0.042]	TNIP1	Eosinophil counts	eosinophil count	-	GCST004606	5:151081488
rs960709-G	2 x 10^-14	-	0.2382	-	0.03247268 unit decrease	[0.024-0.041]	TNIP1	Sum eosinophil basophil counts	basophil count, eosinophil count	-	GCST004624	5:151081488
rs960709-G	1 x 10^-22	-	0.322002	-	-	-	TNIP1	Eosinophil counts	eosinophil count	-	GCST90002302	5:151081488
rs960709-G	6 x 10^-17	-	0.239112	-	0.021755753 unit decrease	[0.017-0.027]	TNIP1	Eosinophil percentage of white cells	eosinophil percentage of leukocytes	-	GCST90002382	5:151081488
rs960709-G	4 x 10^-23	-	0.239769	-	0.023189 SD unit decrease	[0.019-0.028]	TNIP1	Eosinophil counts	eosinophil count	-	GCST90002298	5:151081488

Showing 1 to 5 of 11 entries

Studies11

Show entries

First author	Study accession	Pub. date	Journal	Title	Reported trait	Trait(s)	Background trait(s)	Discovery sample number	Replication sample number	Association count	Summary statistics

First author	Study accession	Pub. date	Journal	Title	Reported trait	Trait(s)	Background trait(s)	Discovery sample number	Replication sample number	Association count	Summary statistics

Martin JE	GCST002069	2013-06-10	Hum Mol Genet	A systemic sclerosis and systemic lupus…	Systemic lupus erythematosus and Systemic sclerosis	systemic scleroderma, systemic lupus erythematosus	-	• 10911 European	• 10198 European	20	Not available
Astle WJ	GCST004600	2016-11-17	Cell	The Allelic Landscape of Human Blood Cell Trait…	Eosinophil percentage of white cells	eosinophil percentage of leukocytes	-	• 172378 European		198	FTP Download or API access
Astle WJ	GCST004606	2016-11-17	Cell	The Allelic Landscape of Human Blood Cell Trait…	Eosinophil counts	eosinophil count	-	• 172275 European		209	FTP Download or API access
Astle WJ	GCST004617	2016-11-17	Cell	The Allelic Landscape of Human Blood Cell Trait…	Eosinophil percentage of granulocytes	eosinophil percentage of granulocytes	-	• 170536 European		184	FTP Download or API access
Astle WJ	GCST004624	2016-11-17	Cell	The Allelic Landscape of Human Blood Cell Trait…	Sum eosinophil basophil counts	sum of eosinophil and basophil counts	-	• 171771 European		206	FTP Download or API access

Showing 1 to 5 of 11 entries