Expression data from WT (Columbia) and pifq (pif1pif3pif4pif5) mutant Arabidopsis seedlings
Microarray 1-colour mRNA
Organism:
Arabidopsis thaliana
Array Design(s):
Affymetrix Genechip Arabidopsis Genome [ATH1]
Publication:
- Leivar P, Tepperman JM, Cohn MM, Monte E, Al-Sady B et al. (2012) Dynamic antagonism between phytochromes and PIF family basic helix-loop-helix factors induces selective reciprocal responses to light and shade in a rapidly responsive transcriptional network in Arabidopsis.
- 'pif1pif3pif4pif5 (pifq) mutant; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '0 hour' vs 'wild type; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '0 hour'
GO terms enrichment analysis
MA plot for the contrast across all genes
- 'pif1pif3pif4pif5 (pifq) mutant; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '1 hour' vs 'wild type; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '1 hour'
GO terms enrichment analysis
Interpro domains enrichment analysis
Reactome pathways enrichment analysis
MA plot for the contrast across all genes
- 'pif1pif3pif4pif5 (pifq) mutant; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '3 hour' vs 'wild type; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '3 hour'
GO terms enrichment analysis
Interpro domains enrichment analysis
Reactome pathways enrichment analysis
MA plot for the contrast across all genes
- 'pif1pif3pif4pif5 (pifq) mutant; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '24 hour' vs 'wild type; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '24 hour'
GO terms enrichment analysis
Interpro domains enrichment analysis
Reactome pathways enrichment analysis
MA plot for the contrast across all genes
- 'pif1pif3pif4pif5 (pifq) mutant; 3 days in continuous light plus Red/Far-Red ratio 0.006' at '0 hour' vs 'wild type; 3 days in continuous light plus Red/Far-Red ratio 0.006' at '0 hour'
GO terms enrichment analysis
Interpro domains enrichment analysis
Reactome pathways enrichment analysis
MA plot for the contrast across all genes