AT1G09310

arabidopsis thaliana

T31J12.3 protein

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Arabidopsis thaliana
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Showing 47 experiments:
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
2.1587 × 10-128.9
AT1G09310'COBL9::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
9.0391 × 10-118.4
AT1G09310'WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
4.2745 × 10-108.4
AT1G09310'rhd6 WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
00
Log2-fold change
-8
AT1G09310'drought environment' vs 'normal watering' in 'vtc2.5 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.7425 × 10-77.5
AT1G09310'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '24 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
00
Log2-fold change
-7.4
AT1G09310'drought environment' vs 'normal watering' in 'vtc2 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.9882 × 10-296-7.4
AT1G09310'drought environment' vs 'normal watering' in 'wild type genotype'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.8105 × 10-85-6.8
AT1G09310'ANAC017 OEb' vs 'wild type genotype' at '1 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
5.28 × 10-20-6.1
AT1G09310'57 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
4.0483 × 10-7-6
AT1G09310'Pseudomonas syringae ES4326' vs 'none' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
2.5761 × 10-4-5.7
AT1G09310'Agrobacterium tumefaciens C58' vs 'none'infectTranscription profiling by array of Arabidopsis after infection with Agrobacterium tumefaciens and tumour development
Adjusted p-valueLog2-fold change
1.357 × 10-10-5.5
AT1G09310'42 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
1.1474 × 10-115.2
AT1G09310'lec1-1 mutant' vs 'wild type' in '12 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
4.0292 × 10-15-4.8
AT1G09310'ANAC017 OEb' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
5.2472 × 10-114.6
AT1G09310'lec1-1 mutant' vs 'wild type' in '8 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
2.2896 × 10-104.5
AT1G09310'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '8 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
6.741 × 10-8-4.4
AT1G09310'abscisic acid; 20 micromolar' vs 'none' in 'embryo'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
6.444 × 10-34.4
AT1G09310'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; root'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
1.6861 × 10-49-4.3
AT1G09310'ANAC017 OEa' vs 'wild type genotype' at '1 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
9.3555 × 10-104.2
AT1G09310'lec2-1 mutant' vs 'wild type' in '12 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
3.3906 × 10-108-4.1
AT1G09310'DCC1 mutant' vs 'wild type genotype'genotypeThioredoxin DCC1 regulates shoot regeneration through modulating multiple genes expression by RNA-seq analyses in Arabidopsis
Adjusted p-valueLog2-fold change
3.4681 × 10-64.1
AT1G09310'tcx2; WOX5:GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
1.1682 × 10-9-4
AT1G09310'low light; DBMIB; 24 micromolar; 2 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
9.9604 × 10-84
AT1G09310'35S::WRKY23-SRDX' vs 'wild type genotype' in 'auxin; 10 micromolar'compound, genotypeMicroarray designed to find PIN polarity regulators downstream of TIR1/AFB
Adjusted p-valueLog2-fold change
2.5123 × 10-44
AT1G09310'pad4 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
1.0699 × 10-22-3.8
AT1G09310'10 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
3.0598 × 10-8-3.7
AT1G09310'paclobutrazol; 20 micromolar' vs 'none' in 'embryo'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
1.4957 × 10-53.7
AT1G09310'seu-3 ant-1 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for seuss and/or aintegumenta
Adjusted p-valueLog2-fold change
1.4957 × 10-53.7
AT1G09310'seu-3 ant-1 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for ant1 and seu3
Adjusted p-valueLog2-fold change
3.9614 × 10-33.7
AT1G09310'tcx2; TMO5:3xGFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
1.3441 × 10-43.6
AT1G09310'abi3-6 mutant' vs 'wild type' in '16 day'age, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 2]
Adjusted p-valueLog2-fold change
2.0683 × 10-43.5
AT1G09310'fus3-3 mutant' vs 'wild type' in '12 day; Col-0'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
2.1811 × 10-73.4
AT1G09310'lec2-1 mutant' vs 'wild type' in '8 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
2.612 × 10-7-3.3
AT1G09310'35 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
2.9197 × 10-10-3.2
AT1G09310''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 10 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
1.5825 × 10-23.2
AT1G09310'tcx2; FEZ:FEZ-GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
5.7535 × 10-5-3.1
AT1G09310'AtGATA2ox transgenic' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing AtGATA2 or mutant for bri1
Adjusted p-valueLog2-fold change
1.6543 × 10-9-3
AT1G09310'wild type; Pseudomonas syringae pv. maculicola str. ES4326' vs 'wild type; mock'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance
Adjusted p-valueLog2-fold change
1.8545 × 10-3-3
AT1G09310'5 day; naphthaleneacetic acid' vs '2 day; naphthaleneacetic acid' in 'stem tissue'growth condition, organism part, timeTranscription profiling by array of Arabidopsis stem tissues after treatment with naphthaleneacetic acid
Adjusted p-valueLog2-fold change
2.8571 × 10-62.9
AT1G09310'fus3-3 mutant' vs 'wild type' in '8 day; Col-0'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
9.7119 × 10-52.8
AT1G09310'Plasmodiophora brassicae' vs 'none' at '23 day'infect, timePlasmodiophora brassicae infection of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.8083 × 10-42.8
AT1G09310'coi1 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
2.6288 × 10-40-2.7
AT1G09310'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
6.2023 × 10-52.7
AT1G09310'rps2 mutant' vs 'wild type genotype' in 'Pseudomonas syringae pv. maculicola carrying AvrRpt2' at '10 hour'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
1.8389 × 10-2-2.7
AT1G09310'pao-1 mutant' vs 'wild type genotype' in 'continuous dark (no light) regimen' at '2 day'environmental stress, genotype, timeTranscriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway
Adjusted p-valueLog2-fold change
4.2985 × 10-43-2.6
AT1G09310'Sei-0 x Col-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
8.5647 × 10-6-2.6
AT1G09310'ANAC017 OEb' vs 'wild type genotype' at '0 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
1.2381 × 10-3-2.6
AT1G09310'paclobutrazol; 20 micromolar' vs 'none' in 'endosperm'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
1.5037 × 10-32.5
AT1G09310'nor1-1 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
2.8672 × 10-3-2.5
AT1G09310'2 hour; excess light' vs '0 hour; low light' in 'tnr4 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
3.8101 × 10-76-2.4
AT1G09310'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.1195 × 10-62-2.4
AT1G09310'ozone; 350 nanoliter' vs 'none' in 'Cvi-0'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
2.2419 × 10-60-2.4
AT1G09310'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.0526 × 10-272.4
AT1G09310'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
5.5717 × 10-92.4
AT1G09310'abi3-6 mutant' vs 'wild type' in '12 day'age, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 2]
Adjusted p-valueLog2-fold change
5.96 × 10-7-2.4
AT1G09310'excess light; none; 2 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
3.6534 × 10-4-2.4
AT1G09310'syringolin; 20 micromolar' vs 'none' in 'uninfected' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
4.3218 × 10-32.4
AT1G09310'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
6.9028 × 10-3-2.4
AT1G09310'cabbage leaf curl virus infected' vs 'mock infected'infectTranscription profiling by array of Arabidopsis infected with geminivirus Cabbage leaf curl virus
Adjusted p-valueLog2-fold change
5.8802 × 10-42.3
AT1G09310'24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei A6; virulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
2.1612 × 10-1382.2
AT1G09310'epcr1-/-; epcr2-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
9.0136 × 10-872.2
AT1G09310'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
3.8902 × 10-46-2.2
AT1G09310'CT101; 350 ppb ozone exposure for 2hr' vs 'CT101; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.368 × 10-28-2.2
AT1G09310'atprmt5 mutant' vs 'wild type genotype'genotypeAtPRMT5 regulates shoot regeneration through modulating multiple genes expression analyzed by RNA-seq
Adjusted p-valueLog2-fold change
3.6176 × 10-7-2.2
AT1G09310'cycloheximide (60 micromolar) and dexamethasone (60 micromolar)' vs 'dimethyl sulfoxide; 60 micromolar'compoundTranscription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes
Adjusted p-valueLog2-fold change
6.8997 × 10-72.2
AT1G09310'3% glucose; 0.1% epibrassinolide' vs 'none'growth conditionGenome wide analysis of glucose brassinosteroid interaction in Arabidopsis
Adjusted p-valueLog2-fold change
3.9772 × 10-6-2.2
AT1G09310'cycloheximide' vs 'dimethyl sulfoxide' in '60 micromolar'compoundTranscription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes
Adjusted p-valueLog2-fold change
4.7697 × 10-4-2.2
AT1G09310'jasmonate' at '22 hour' vs 'none' at '0 hour' in 'opr3 mutant'compound, genotype, timeTranscription profiling of Arabidopsis male-sterile opr3 mutant stamens treated with jasmonate or its precursor, 12-oxophytodienoic acid
Adjusted p-valueLog2-fold change
4.3478 × 10-32.2
AT1G09310'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
2.6638 × 10-52-2.1
AT1G09310'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.3991 × 10-49-2.1
AT1G09310'350 ppb ozone exposure for 2hr' vs 'control' in 'tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
1.1598 × 10-47-2.1
AT1G09310'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky75 mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
7.6476 × 10-40-2.1
AT1G09310'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
2.3669 × 10-11-2.1
AT1G09310'clf28 mutant' vs 'wild type' in 'silique'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
6.4347 × 10-82.1
AT1G09310'seed after 48 h of stratification (48 h S)' vs 'seed after 12 h of stratification (12 h S)'growth conditionTranscription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination
Adjusted p-valueLog2-fold change
6.6995 × 10-62.1
AT1G09310'oxt6:AtCPSF30' vs 'wild type'genotypeA polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.3261 × 10-42.1
AT1G09310'seu-3 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for ant1 and seu3
Adjusted p-valueLog2-fold change
1.3261 × 10-42.1
AT1G09310'seu-3 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for seuss and/or aintegumenta
Adjusted p-valueLog2-fold change
2.1877 × 10-3-2.1
AT1G09310'wild type; Golovinomyces orontii infection' vs 'wild type; no infection' at 7 daygenotype, infect, timeTranscription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii
Adjusted p-valueLog2-fold change
8.3421 × 10-32.1
AT1G09310'18 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei A6; virulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
3.4261 × 10-2-2.1
AT1G09310'ANAC017 OEa' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
4.134 × 10-2-2.1
AT1G09310'mkk1;mkk2 knockout; none' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
2.5218 × 10-462
AT1G09310'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'trichostatin; 1 micromolar'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
1.0939 × 10-17-2
AT1G09310'350 ppb ozone exposure for 2hr' vs 'none' in 'wild type'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
1.6605 × 10-9-2
AT1G09310'clf28 mutant' vs 'wild type' in 'root'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
2.1331 × 10-5-2
AT1G09310'csn4-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
1.3556 × 10-22
AT1G09310'ein2 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
1.895 × 10-22
AT1G09310'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 mutant; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
2.5914 × 10-264-1.9
AT1G09310'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.6802 × 10-93-1.9
AT1G09310'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky25, wrky33 double mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
8.8198 × 10-24-1.9
AT1G09310'Te; 350 ppb ozone exposure for 2hr' vs 'Te; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
8.0709 × 10-17-1.9
AT1G09310'S-nitrosocysteine; 1 millimolar' vs 'buffer'compoundTranscription profiling by high throughput sequencing of Arabidopsis leaf samples infiltrated with S-nitrosocysteine (CysNO)
Adjusted p-valueLog2-fold change
3.651 × 10-13-1.9
AT1G09310'ANAC017 OEa' vs 'wild type genotype' at '0 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
8.9763 × 10-7-1.9
AT1G09310'7 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
1.6776 × 10-6-1.9
AT1G09310'2 hour; excess light' vs '0 hour; low light' in 'wild type'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
3.3229 × 10-6-1.9
AT1G09310'bak1-3; Pep2' at '10 hour' vs 'wild type; Pep2' at '10 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
4.0204 × 10-5-1.9
AT1G09310'cycloheximide, dexamethasone' vs 'mock'treatmentTranscription profiling of Arabidopsis WUSCHEL targets
Adjusted p-valueLog2-fold change
1.0238 × 10-31.9
AT1G09310'tor mutant' vs 'wild type' in 'none; 0 micromolar'compound, genotypeTranscription profiling by array of Arabidopsis estradiol inducible RNAi-tor seedlings treated with glucose
Adjusted p-valueLog2-fold change
4.7376 × 10-31.9
AT1G09310'pad2 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
5.2683 × 10-31.9
AT1G09310'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 gpa1-4 double mutant; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
6.5501 × 10-3-1.9
AT1G09310'ethanol; 2.5 percent' vs 'control' in 'wild type; 13 days in 12 h light/12 h dark (LD)'compound, genotype, growth conditionGene expression from Inducible TOC1 expression in Arabidopsis seedlings
Adjusted p-valueLog2-fold change
7.0958 × 10-3-1.9
AT1G09310'csn4-1 mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
7.3146 × 10-3-1.9
AT1G09310'2hr continuous KNO3' vs 'control' in 'epidermis and cortex'compound, organism partTranscription profiling by array of Arabidopsis root cells after treatment with KNO3
Adjusted p-valueLog2-fold change
9.9066 × 10-9-1.8
AT1G09310''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 6 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
2.5312 × 10-81.8
AT1G09310'seed germinating in continuous light 48 h SL' vs 'seed germinating in continuous light 24 h SL'growth conditionTranscription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination
Adjusted p-valueLog2-fold change
1.0097 × 10-41.8
AT1G09310'light pulse in the middle of the day' vs 'day time control'growth conditionRNA-seq of Arabidopsis seedlings with or without light pulses treatment in the middle of day or night against untreated controls to study how the light pulses control the phase of the circadian clock
Adjusted p-valueLog2-fold change
8.3409 × 10-4-1.8
AT1G09310'Phytophthora infestans' vs 'none' in 'erp2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
1.4729 × 10-31.8
AT1G09310'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '6 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
7.4626 × 10-3-1.8
AT1G09310'Blumeria graminis f. sp. hordei K1; avirulent; 18 hour' vs 'none; wild type phenotype; 18 hour'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.168 × 10-21.8
AT1G09310'apl mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis phloem from Altered Phloem Development (APL) mutants and wild type controls
Adjusted p-valueLog2-fold change
3.1976 × 10-21.8
AT1G09310'boric acid 5 millimolar' vs 'none'compound, doseExpression data from arabidopsis root in response to boron toxicity
Adjusted p-valueLog2-fold change
3.4326 × 10-1321.7
AT1G09310'abscisic acids; 100 micromolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
3.5492 × 10-711.7
AT1G09310'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-3'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
1.7537 × 10-25-1.7
AT1G09310'wild type; Botrytis cinerea 2100' vs 'wild type; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
1.8493 × 10-15-1.7
AT1G09310'ozone; 350 nanoliter' vs 'none' in 'Shahdara'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
9.3488 × 10-91.7
AT1G09310'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
6.0708 × 10-71.7
AT1G09310'bzr1-1D;bri1-116 double mutant' vs 'bri1-116 null mutant'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
4.3057 × 10-6-1.7
AT1G09310'Sclerotinia sclerotiorum' vs 'none' in 'coi1-2 mutant' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
8.552 × 10-4-1.7
AT1G09310'drought' vs 'control' in 'wild type; leaf'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
2.4151 × 10-3-1.7
AT1G09310'Turnip mosaic virus' vs 'mock' in 'zone 0'infect, sampling siteTranscription profiling by of Arabidopsis leaves after infection with Potyvirus turnip mosaic virus
Adjusted p-valueLog2-fold change
2.5818 × 10-31.7
AT1G09310'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '3 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
4.4949 × 10-3-1.7
AT1G09310'AFB1 overexpression; Pseudomonas syringae pv. tomato DC3000' vs 'AFB1 overexpression; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
1.5731 × 10-21.7
AT1G09310'24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei K1; avirulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
2.8967 × 10-2-1.7
AT1G09310'gai mutant' vs 'wild type' in 'flg22'genotype, time, treatmentTranscription profiling by array of Arabidopsis DELLA mutants after treatment with flg22, methyl jasmonate, Alternaria brassicicola or Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
4.01 × 10-21.7
AT1G09310'3% glucose' vs 'none'growth conditionGenome wide analysis of glucose brassinosteroid interaction in Arabidopsis
Adjusted p-valueLog2-fold change
2.0178 × 10-511.6
AT1G09310'sulki1-8 mutant' vs 'wild type genotype' in 'Ler/Kas-2 hybrid'ecotype, genotypeRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Adjusted p-valueLog2-fold change
3.3305 × 10-44-1.6
AT1G09310'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.074 × 10-271.6
AT1G09310'abscisic acid; 50 micromolar' vs 'mock' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
2.2437 × 10-14-1.6
AT1G09310'Col-0 x Sei-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.585 × 10-9-1.6
AT1G09310'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
2.4783 × 10-8-1.6
AT1G09310'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for coi1-16 ein2 sid2'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
2.4784 × 10-8-1.6
AT1G09310'Col-0; 350 ppb ozone exposure for 2hr' vs 'Col-0; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.3849 × 10-8-1.6
AT1G09310'val1 mutant' vs 'wild type' at '13 days after pollination'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
9.5626 × 10-7-1.6
AT1G09310'nlp20; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
5.0241 × 10-6-1.6
AT1G09310'KZ-10 x Mrk-0' vs 'Mrk-0'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
6.0312 × 10-6-1.6
AT1G09310'antimycin A; 50 micromolar' vs 'water' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
4.0639 × 10-5-1.6
AT1G09310'camta1/2/3 mutant; grown at 22 C' vs 'wild type; grown at 22 C'genotype, growth conditionExpression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants
Adjusted p-valueLog2-fold change
6.7969 × 10-5-1.6
AT1G09310'antimycin A; 50 micromolar; wild type' vs 'water; wild type'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
2.4663 × 10-41.6
AT1G09310'1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '0 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)
Adjusted p-valueLog2-fold change
5.1085 × 10-31.6
AT1G09310'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'none' at '0 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
1.3952 × 10-2-1.6
AT1G09310'jasmonate' at '8 hour' vs 'none' at '0 hour' in 'opr3 mutant'compound, genotype, timeTranscription profiling of Arabidopsis male-sterile opr3 mutant stamens treated with jasmonate or its precursor, 12-oxophytodienoic acid
Adjusted p-valueLog2-fold change
3.0606 × 10-2-1.6
AT1G09310'gai mutant' vs 'wild type' in 'flg22' at '1 hour'genotype, time, treatmentTranscription profiling by array of Arabidopsis DELLA mutants after treatment with flg22, methyl jasmonate, Alternaria brassicicola or Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
1.4072 × 10-33-1.5
AT1G09310'wrky33 mutant; Botrytis cinerea 2100' vs 'wrky33 mutant; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
3.3085 × 10-231.5
AT1G09310'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-4'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
2.6405 × 10-15-1.5
AT1G09310'Sei-0 x Col-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.2762 × 10-71.5
AT1G09310't-zeatin; Col-0' vs 'DMSO; Col-0'compound, ecotypeTranscription profiling by array of Arabidopsis mutant for arr10 and arr12 after treatment with t-zeatin
Adjusted p-valueLog2-fold change
2.2762 × 10-71.5
AT1G09310'trans-zeatin; 20 micromolar' vs 'control' in 'wild type'compound, genotypeTranscription profiling of aerial parts of Arabidopsis wild type and arr10 arr12 double mutant seedlings treated with the cytokinin trans-zeatin
Adjusted p-valueLog2-fold change
4.437 × 10-61.5
AT1G09310'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.8122 × 10-5-1.5
AT1G09310'12 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
2.7668 × 10-5-1.5
AT1G09310'hmr-5 null mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis hemera null (hmr-5) and weak-allele (hmr-22) photomorphogenetic mutants against wild-type controls grown under red light
Adjusted p-valueLog2-fold change
3.455 × 10-5-1.5
AT1G09310'antimycin A; 50 micromolar; anac017-1' vs 'water; anac017-1'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
3.5221 × 10-5-1.5
AT1G09310'cs26 mutant' vs 'wild type' in 'long day photoperiod'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods
Adjusted p-valueLog2-fold change
5.2502 × 10-5-1.5
AT1G09310'cycloheximide' vs 'mock'treatmentTranscription profiling of Arabidopsis WUSCHEL targets
Adjusted p-valueLog2-fold change
5.5246 × 10-5-1.5
AT1G09310'100 micromolar; 4-chloro-6-methyl-2-phenylpyrimidine' vs 'control' at '24 hour'compound, timeTranscription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine
Adjusted p-valueLog2-fold change
5.567 × 10-5-1.5
AT1G09310'camta1/2/3 mutant; grown at 22 C and treated at 4 C for 24 hours' vs 'wild type; grown at 22 C and treated at 4 C for 24 hours'genotype, growth conditionExpression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants
Adjusted p-valueLog2-fold change
1.6666 × 10-4-1.5
AT1G09310'350 ppb ozone exposure for 2hr' vs 'control' in 'coi1-16 ein2 sid2'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
2.1777 × 10-4-1.5
AT1G09310'Blumeria graminis f.sp. hordei' vs 'none' in 'ataf1-1'genotype, infectTranscription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei
Adjusted p-valueLog2-fold change
2.7114 × 10-3-1.5
AT1G09310'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
1.018 × 10-7-1.4
AT1G09310'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
1.7407 × 10-71.4
AT1G09310'3 percent glucose' vs 'none'compoundTranscription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions
Adjusted p-valueLog2-fold change
2.8347 × 10-71.4
AT1G09310'3 percent glucose and 1 micromolar indole-3-acetic acid' vs 'none'compoundTranscription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions
Adjusted p-valueLog2-fold change
2.2282 × 10-51.4
AT1G09310'3% glucose' at '4 hour' vs 'control' at '0 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid
Adjusted p-valueLog2-fold change
3.0823 × 10-5-1.4
AT1G09310'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
1.9589 × 10-4-1.4
AT1G09310'3 day' vs '0 day'sampling time pointTranscriptomes and differential gene expression at the Arabidopsis shoot meristem during flowering
Adjusted p-valueLog2-fold change
2.0129 × 10-41.4
AT1G09310'early floral stage 9 to 11; ant-4' vs 'early floral stage 9 to 11; wild type'developmental stage, genotypeTranscription profiling of pistils from Arabidopsis wild type, ant-4 mutant and ino-1mutant plants at different developmental stages
Adjusted p-valueLog2-fold change
9.1646 × 10-41.4
AT1G09310'abscisic acid and dimethylthiourea' vs 'ethanol'compoundTranscription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea
Adjusted p-valueLog2-fold change
6.4513 × 10-3-1.4
AT1G09310'2hr transitory KNO3' vs 'control' in 'epidermis and cortex'compound, organism partTranscription profiling by array of Arabidopsis root cells after treatment with KNO3
Adjusted p-valueLog2-fold change
8.5145 × 10-3-1.4
AT1G09310'100 micromolar; fenclorim' vs 'control' at '24 hour'compound, timeTranscription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine
Adjusted p-valueLog2-fold change
1.4469 × 10-2-1.4
AT1G09310'ein2-1; Alternaria brassicicola' at '24 hours post infection' vs 'wild type; mock' at '24 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
1.4625 × 10-2-1.4
AT1G09310'wild type; Pseudomonas syringae pv. tomato DC3000' vs 'wild type; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
1.2444 × 10-1431.3
AT1G09310'light pulse at ZT18' vs 'control'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis exposed to a pulse of white light at ZT18 to study the effect of light on alternative splicing
Adjusted p-valueLog2-fold change
2.8582 × 10-361.3
AT1G09310'trichostatin; 1 micromolar' vs 'none' in 'pUBI10::mCherry-GR-linker-WUS'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
2.1058 × 10-32-1.3
AT1G09310'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.2925 × 10-29-1.3
AT1G09310'hda6 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants
Adjusted p-valueLog2-fold change
5.5433 × 10-26-1.3
AT1G09310'heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
8.1507 × 10-221.3
AT1G09310'light regimen for 6 hour' vs 'continuous dark (no light) regimen' in 'wild type'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
5.2165 × 10-201.3
AT1G09310'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'none'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
3.344 × 10-91.3
AT1G09310'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.7854 × 10-8-1.3
AT1G09310'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.1292 × 10-61.3
AT1G09310'trans-zeatin; 20 micromolar' vs 'control' in 'arr10 arr12 double mutant'compound, genotypeTranscription profiling of aerial parts of Arabidopsis wild type and arr10 arr12 double mutant seedlings treated with the cytokinin trans-zeatin
Adjusted p-valueLog2-fold change
1.1292 × 10-61.3
AT1G09310't-zeatin; SALK_098604, SALK_054752' vs 'DMSO; SALK_098604, SALK_054752'compound, ecotypeTranscription profiling by array of Arabidopsis mutant for arr10 and arr12 after treatment with t-zeatin
Adjusted p-valueLog2-fold change
7.5509 × 10-61.3
AT1G09310'MYB96 overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing MYB96 or myb96 knock out mutants
Adjusted p-valueLog2-fold change
7.5661 × 10-61.3
AT1G09310'met1 mutant' vs 'wild type' at '6 hour'genotype, timeTranscription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours
Adjusted p-valueLog2-fold change
1.8175 × 10-5-1.3
AT1G09310'KZ-10 x Mrk-0' vs 'KZ-10'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
2.1011 × 10-51.3
AT1G09310'bzip17 -/- ; bzip60 -/-' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
4.0518 × 10-5-1.3
AT1G09310'scrm-D;mute' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings
Adjusted p-valueLog2-fold change
7.5495 × 10-5-1.3
AT1G09310'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
1.25 × 10-4-1.3
AT1G09310'antimycin A; 50 micromolar' vs 'water' in 'rao1-2 mutant'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
1.565 × 10-4-1.3
AT1G09310'Pseudomonas syringae DC3000 COR-avrPphB strain' vs 'mock' in 'wild type'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
2.1409 × 10-4-1.3
AT1G09310'Pseudomonas syringae pv tomato DC3000(avrRpt2)' vs 'none' in 'gh3.5-1D heterozygous mutant'genotype, infectTranscription profiling by array of Arabidopsis heterozygous mutant for gh3.5 after inoculation with Pseudomonas syringae pv tomato DC3000(avrRpt2) against wild type counterparts and uninfected controls
Adjusted p-valueLog2-fold change
2.8268 × 10-4-1.3
AT1G09310'RBRcs mutant' vs 'wild type' in 'none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
3.6435 × 10-4-1.3
AT1G09310'eds16 mutant; Golovinomyces orontii infection' vs 'eds16 mutant; no infection' at 7 daygenotype, infect, timeTranscription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii
Adjusted p-valueLog2-fold change
3.9939 × 10-4-1.3
AT1G09310'antimycin A; 50 micromolar; rao2_EMS_mutant' vs 'water; rao2_EMS_mutant'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
4.1728 × 10-41.3
AT1G09310'osmotic stress (3h with 0.3 molar mannitol)' vs 'control' in 'root'growth condition, organism partTranscriptome Profiling of Roots and leaves Under High Osmotic Stress in Arabidopsis
Adjusted p-valueLog2-fold change
4.6249 × 10-4-1.3
AT1G09310'SCO3-1 point mutation' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for sco3
Adjusted p-valueLog2-fold change
5.4339 × 10-4-1.3
AT1G09310'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
9.6486 × 10-4-1.3
AT1G09310'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
5.9167 × 10-31.3
AT1G09310'ant-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for ant1 and seu3
Adjusted p-valueLog2-fold change
5.9167 × 10-31.3
AT1G09310'ant-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for seuss and/or aintegumenta
Adjusted p-valueLog2-fold change
1.1268 × 10-21.3
AT1G09310'strigolactone GR24; 2.5 micromolar' vs 'DMSO'compoundTranscription profiling by array of Arabidosis seeds after treatment with EL6 and GR24 to investigate the effect on germination
Adjusted p-valueLog2-fold change
1.1947 × 10-2-1.3
AT1G09310'2 hour; excess light' vs '0 hour; low light' in 'hsfa1dhsfa2hsfa3 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
1.2278 × 10-21.3
AT1G09310'scarecrow mutant' vs 'wild type'genotypeTranscription profiling of Scarecrow mutant Arabidopsis root-tips of 5-day-old plants to those of wildtype reveals an evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants
Adjusted p-valueLog2-fold change
2.3621 × 10-2-1.3
AT1G09310'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
4.3639 × 10-2-1.3
AT1G09310'Phytophthora infestans' vs 'none' in 'erp2 mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
8.3394 × 10-15-1.2
AT1G09310'salicylic acid; 0.5 millimolar' vs 'none' in 'wild type genotype'compound, genotypeSalicylic acid-induced gene expression in wild-type Col-0 and mutant upl3-4 Arabidopsis thaliana plants.
Adjusted p-valueLog2-fold change
1.8161 × 10-12-1.2
AT1G09310'pif quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
1.465 × 10-5-1.2
AT1G09310'Pseudomonas syringae pv. tomato expressing HopZ1a' vs 'MgCl2' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
2.0359 × 10-4-1.2
AT1G09310'hmr-22 weak allele mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis hemera null (hmr-5) and weak-allele (hmr-22) photomorphogenetic mutants against wild-type controls grown under red light
Adjusted p-valueLog2-fold change
2.9468 × 10-4-1.2
AT1G09310'pmr5 pmr6 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for pmr5 and/or pmr6
Adjusted p-valueLog2-fold change
5.1548 × 10-4-1.2
AT1G09310'sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
7.2155 × 10-4-1.2
AT1G09310'0.1 mM nitrate' vs '10 mM nitrate' in 'MtNPF1.7 expression'genotype, growth conditionTranscriptional profiling of Arabidopsis constitutively expressing Medicago truncatula NRT1 PTR FAMILY 1.7
Adjusted p-valueLog2-fold change
3.0346 × 10-31.2
AT1G09310'CL37' vs 'fae1 mutant' in '11 to 12 DPA'developmental stage, genotypeRNASeq of Developing Arabidopsis Seeds Producing Hydroxy-Fatty Acids
Adjusted p-valueLog2-fold change
1.0119 × 10-2-1.2
AT1G09310'15 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
1.3226 × 10-2-1.2
AT1G09310'rrd2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis temperature-dependent later root fasciation mutants
Adjusted p-valueLog2-fold change
1.5479 × 10-2-1.2
AT1G09310'37 degrees celsius' vs '20 degrees celsius'compound, temperatureTranscription profiling by array of Arabidopsis after heat shock or treatment with tunicamycin or L-azetidine-2-carboxylic acid
Adjusted p-valueLog2-fold change
5.3456 × 10-52-1.1
AT1G09310'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.078 × 10-47-1.1
AT1G09310'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
8.8191 × 10-271.1
AT1G09310'arid2-/-; arid3-/-; arid4-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
2.0801 × 10-171.1
AT1G09310'lsm4 mutant' vs 'wild type' in 'Columbia ecotype'ecotype, genotypeTranscription profiling by high throughput sequencing of Arabidopsis lsm4-1 mutants and sad1/lsm5 double mutants
Adjusted p-valueLog2-fold change
5.0723 × 10-14-1.1
AT1G09310'hda9 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants
Adjusted p-valueLog2-fold change
3.3321 × 10-6-1.1
AT1G09310'oligomycin' vs 'control' at '4 hour'growth condition, timeEffect of oligomycin on transcript levels in Arabidopsis seedling cultures
Adjusted p-valueLog2-fold change
8.7533 × 10-6-1.1
AT1G09310'chr11-1 chr17-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis chr11-1 chr17-1 mutants
Adjusted p-valueLog2-fold change
3.2826 × 10-5-1.1
AT1G09310'Blumeria graminis f.sp. hordei' vs 'none' in 'wild type'genotype, infectTranscription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei
Adjusted p-valueLog2-fold change
6.1062 × 10-5-1.1
AT1G09310'auxin' vs 'none' in '35 day'age, growth conditionTranscription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin
Adjusted p-valueLog2-fold change
1.2762 × 10-41.1
AT1G09310'3% glucose' at '2 hour' vs 'control' at '0 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid
Adjusted p-valueLog2-fold change
3.4049 × 10-4-1.1
AT1G09310'GID1b over expression in sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
7.1703 × 10-4-1.1
AT1G09310'nudt7-1 sid2-1' vs 'wild type'genotypeTranscription profiling of EDS1- and SA-dependent genes in Arabidopsis nudt7-1
Adjusted p-valueLog2-fold change
8.7273 × 10-41.1
AT1G09310'pvip1; pvip2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for pvip1 and pvip2
Adjusted p-valueLog2-fold change
5.3504 × 10-3-1.1
AT1G09310'35S::MIF1; dark' vs 'empty pRR2222 vector; dark'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
6.5579 × 10-3-1.1
AT1G09310'1 day' vs '0 day'sampling time pointTranscriptomes and differential gene expression at the Arabidopsis shoot meristem during flowering
Adjusted p-valueLog2-fold change
1.2852 × 10-21.1
AT1G09310'trichostatin A 2.5 milligram per liter' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ddm1
Adjusted p-valueLog2-fold change
2.0004 × 10-21.1
AT1G09310'fdh-3940 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis mutant for bodyguard (bdg), lacerata (lcr) and fiddlehead (fdh) against wild-type controls
Adjusted p-valueLog2-fold change
3.6235 × 10-21.1
AT1G09310'iron; 100 micromolar' vs 'none' in 'bhlh100/101 double mutant; root'compound, genotype, organism partExpression data from Arabidopsis roots and shoots grown with or without iron
Adjusted p-valueLog2-fold change
3.805 × 10-21.1
AT1G09310'100 micromolar ATP' vs 'control' in 'wild type'genotype, growth conditionATP effect on Arabidopsis roots
Adjusted p-valueLog2-fold change
4.287 × 10-2-1.1
AT1G09310'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
5.5043 × 10-14-1
AT1G09310'hda5 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants
Adjusted p-valueLog2-fold change
6.3711 × 10-71
AT1G09310'bzip17 -/- ; bzip60 -/-' vs 'wild type genotype' in 'none'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
8.2177 × 10-71
AT1G09310'xrn3-8 mutant' vs 'wild type genotype' at 'immediately after cordycepin treatment'genotype, sampling time pointTranscription profiling by array of a stably RNAi-silenced nuclear 5’-3’ exonuclease XRN3 mutant line in Arabidopsis thaliana after transcriptional inhibition with cordycepin
Adjusted p-valueLog2-fold change
3.4058 × 10-61
AT1G09310'xrn3-8 mutant' vs 'wild type genotype' at '60 minutes after cordycepin treatment'genotype, sampling time pointTranscription profiling by array of a stably RNAi-silenced nuclear 5’-3’ exonuclease XRN3 mutant line in Arabidopsis thaliana after transcriptional inhibition with cordycepin
Adjusted p-valueLog2-fold change
1.1043 × 10-51
AT1G09310'drought' vs 'control' in 'wild type; root'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
2.0223 × 10-5-1
AT1G09310'Plectosphaerella cucumerina inoculation' vs 'control' in 'agb1-1 mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina
Adjusted p-valueLog2-fold change
2.4043 × 10-51
AT1G09310'bzr1-1D;bri1-116 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
2.8891 × 10-51
AT1G09310'met1 mutant' vs 'wild type' at '0 hour'genotype, timeTranscription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours
Adjusted p-valueLog2-fold change
4.5974 × 10-5-1
AT1G09310'antimycin A; 50 micromolar' vs 'water' in 'rao1-1 mutant'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
1.116 × 10-41
AT1G09310'sucrose; 1 percent' vs 'none' in 'RBRcs mutant'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
4.0056 × 10-4-1
AT1G09310'pBeaconRFP_GR::bZIP1; Treated with cycloheximide, 10 uM dexamethasone in ethanol, 20 mM KCl' vs 'empty vector; Treated with cycloheximide, ethanol, 20 mM KCl'genotype, treatmentHit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis
Adjusted p-valueLog2-fold change
1.0232 × 10-31
AT1G09310'gia3 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for gia3
Adjusted p-valueLog2-fold change
1.5999 × 10-3-1
AT1G09310'pBeaconRFP_GR::bZIP1; Treated with cycloheximide, ethanol, 20 mM KCl' vs 'empty vector; Treated with cycloheximide, ethanol, 20 mM KCl'genotype, treatmentHit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis
Adjusted p-valueLog2-fold change
1.7119 × 10-31
AT1G09310's1p -/-; s2p -/-' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
2.4238 × 10-3-1
AT1G09310'syringolin; 20 micromolar' vs 'none' in 'powdery mildew infected' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
2.5719 × 10-3-1
AT1G09310'ozone 500 parts per billion' vs 'control'growth conditionArabidopsis thaliana response to ozone
Adjusted p-valueLog2-fold change
2.5719 × 10-3-1
AT1G09310'ozone 500 parts per billion' vs 'control'growth conditionFunctional Genomics of Ozone Stress in Arabidopsis.
Adjusted p-valueLog2-fold change
4.8166 × 10-3-1
AT1G09310'Pseudomonas syringae pv. Maculicola with effector AvrRpt2' at '6 hour' vs 'none'time, treatmentExpression profiling of Col-0 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
5.3307 × 10-3-1
AT1G09310'5 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
6.4549 × 10-31
AT1G09310'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
7.6731 × 10-3-1
AT1G09310'dimethylthiourea' vs 'ethanol'compoundTranscription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea
Adjusted p-valueLog2-fold change
1.017 × 10-2-1
AT1G09310'csn3-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
1.7886 × 10-2-1
AT1G09310'dde2-2; Alternaria brassicicola' at '24 hours post infection' vs 'wild type; mock' at '24 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection