AT1G18710 (AtMYB47)

arabidopsis thaliana

MYB transcription factor

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Arabidopsis thaliana
Organism part
Showing 41 experiments:
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Created with Highcharts 6.2.0adult vascular leafcarpelcauline leafcotyledonflowerflower pedicelfruitfruit septumfruit valvehypocotylleafmixed shoot apical meristem, cotyledon and first leavespetalpetioleplant calluspollenrootroot tiprosette leafseedsepalsiliquestamenstem internodestem node
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Regulation
Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
5.5445 × 10-56.6
AtMYB47'WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
2.435 × 10-46.1
AtMYB47'COBL9::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
6.3485 × 10-6-5.8
AtMYB47'37 degrees celsius' vs '20 degrees celsius'compound, temperatureTranscription profiling by array of Arabidopsis after heat shock or treatment with tunicamycin or L-azetidine-2-carboxylic acid
Adjusted p-valueLog2-fold change
4.0425 × 10-45.6
AtMYB47'tcx2; TMO5:3xGFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
3.9608 × 10-105.4
AtMYB47"leaf 8 wounded" vs "unwounded"growth conditionTranscription profiling by array of Arabidopsis leaves either under electric current injection or with distal wound against untreated controls
Adjusted p-valueLog2-fold change
3.6173 × 10-35.4
AtMYB47'rhd6 WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
1.1176 × 10-8-5.2
AtMYB47'ANAC017 OEb' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
4.313 × 10-35.1
AtMYB47'tcx2; FEZ:FEZ-GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
1.5254 × 10-54.8
AtMYB47'locally damaged by leafminer' vs 'control'growth conditionTranscription profiling by array of Arabidopsis leaves with localised or systemic damage by leafminer Liriomyza huidobrensis
Adjusted p-valueLog2-fold change
5.6747 × 10-64.4
AtMYB47'Plasmodiophora brassicae' vs 'none' at '23 day'infect, timePlasmodiophora brassicae infection of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.5616 × 10-74.3
AtMYB47'low water potential stress' vs 'control' in 'hai1-2 mutant'genotype, growth conditionComparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant
Adjusted p-valueLog2-fold change
5.0748 × 10-64.3
AtMYB47'wox5-1 mutant' vs 'wild type genotype' in 'wox5 GFP positive'genotype, phenotypeFrom gene networks to network motif dynamics: how the presense of positive feed-back and -forward loops between PERIANTHIA, WUSCHEL-RELATED HOMEOBOX5 and GRF-INTERACTING FACTOR 1 modulates gene expression and function in the Arabidopsis roots.
Adjusted p-valueLog2-fold change
2.1919 × 10-5-4.2
AtMYB47'srk2dei triple mutant' vs 'wild type' in 'dehydration stress'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
1.1885 × 10-9-4
AtMYB47'siz1-3' vs 'wild type' in 'control'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for siz1 after exposure to drought
Adjusted p-valueLog2-fold change
1.7613 × 10-693.9
AtMYB47'ref8-1 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidospsis ref8-1, med5a/5b, and med5a/5b ref8-1 mutants
Adjusted p-valueLog2-fold change
1.0583 × 10-43.9
AtMYB47'low water potential stress' vs 'control' in 'wild type'genotype, growth conditionComparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant
Adjusted p-valueLog2-fold change
5.7237 × 10-4-3.9
AtMYB47'pdx1.3 knockout' vs 'wild type' in 'leaf'genotype, organism partExpression data from WT Col-0 and the pdx1.3 ko mutant of Arabidopsis
Adjusted p-valueLog2-fold change
1.36 × 10-503.8
AtMYB47'mannitol; 300 millimolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
4.498 × 10-8-3.8
AtMYB47'srk2dei triple mutant' vs 'wild type' in '50 micromolar abscisic acid'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
2.8625 × 10-143.7
AtMYB47'mannitol; 300 millimolar' vs 'none' in 'pyl duodecuple loss of function mutant'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.2275 × 10-53.5
AtMYB47'homozygous AtCesA4' vs 'heterozygous AtCesA4'genotypeTranscription profiling by array of Arabidopsis cellulose synthase mutants
Adjusted p-valueLog2-fold change
2.7296 × 10-21-3.4
AtMYB47'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.2306 × 10-103.4
AtMYB47'lec1-1 mutant' vs 'wild type' in '12 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
1.7868 × 10-7-3.4
AtMYB47'ANAC017 OEa' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
3.4831 × 10-2-3.4
AtMYB47'drought environment' vs 'normal watering' in 'vtc2.5 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.6282 × 10-93.3
AtMYB47'lec2-1 mutant' vs 'wild type' in '12 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
2.4536 × 10-93.3
AtMYB47'drought' vs 'control' in 'wild type; root'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
1.9624 × 10-8-3.3
AtMYB47'ANAC017 OEb' vs 'wild type genotype' at '1 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
2.4457 × 10-43.3
AtMYB47'nhx5-2/nhx6-2 knock outs' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis AtNHX5 and AtNHX6 single and double knock out mutants
Adjusted p-valueLog2-fold change
6.8238 × 10-563.2
AtMYB47'drought environment' vs 'none' in 'wild type genotype'environmental stress, genotypeTranscriptome analysis using RNA sequencing conducted for Arabidopsis thaliana Col-0 wild type and ahl10-1 mutant in response to low water potential (drought environment)
Adjusted p-valueLog2-fold change
3.1021 × 10-453.2
AtMYB47'drought environment' vs 'none' in 'ahl10-1'environmental stress, genotypeTranscriptome analysis using RNA sequencing conducted for Arabidopsis thaliana Col-0 wild type and ahl10-1 mutant in response to low water potential (drought environment)
Adjusted p-valueLog2-fold change
7.3688 × 10-16-3.1
AtMYB47'atprmt5 mutant' vs 'wild type genotype'genotypeAtPRMT5 regulates shoot regeneration through modulating multiple genes expression analyzed by RNA-seq
Adjusted p-valueLog2-fold change
6.811 × 10-11-3.1
AtMYB47'glu1-2 mutant' vs 'wild type' in 'rosette leaf'genotype, organism partTranscription profiling by array of Arabidopsis mutant for Fd-GOGAT1/GLU1
Adjusted p-valueLog2-fold change
2.5846 × 10-9-3.1
AtMYB47'ANAC017 OEa' vs 'wild type genotype' at '1 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
1.1763 × 10-2-3.1
AtMYB47'syringolin; 20 micromolar' vs 'none' in 'uninfected' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
3.9767 × 10-9-3
AtMYB47''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 6 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
7.5672 × 10-7-3
AtMYB47'dexamethasone-induced STM overexpression' vs 'wild type' at '216 hour'phenotype, sampling time pointTranscription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
Adjusted p-valueLog2-fold change
8.4355 × 10-53
AtMYB47'light pulse in the middle of the day' vs 'day time control'growth conditionRNA-seq of Arabidopsis seedlings with or without light pulses treatment in the middle of day or night against untreated controls to study how the light pulses control the phase of the circadian clock
Adjusted p-valueLog2-fold change
6.6777 × 10-4-3
AtMYB47'Agrobacterium tumefaciens C58' vs 'none'infectTranscription profiling by array of Arabidopsis after infection with Agrobacterium tumefaciens and tumour development
Adjusted p-valueLog2-fold change
3.8095 × 10-152.9
AtMYB47'S-nitrosocysteine; 1 millimolar' vs 'buffer'compoundTranscription profiling by high throughput sequencing of Arabidopsis leaf samples infiltrated with S-nitrosocysteine (CysNO)
Adjusted p-valueLog2-fold change
9.3146 × 10-6-2.9
AtMYB47'dexamethasone-induced STM overexpression' vs 'dexamethasone-induced STM knock down by RNAi' at '216 hour'phenotype, sampling time pointTranscription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
Adjusted p-valueLog2-fold change
3.717 × 10-4-2.9
AtMYB47'1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '3 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)
Adjusted p-valueLog2-fold change
3.978 × 10-3-2.9
AtMYB47'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
4.0697 × 10-32.9
AtMYB47'phosphate deprivation' vs 'control' in 'wild type genotype; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
6.9936 × 10-3-2.8
AtMYB47'phr1 mutant' vs 'wild type genotype' in 'phosphate deprivation; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
1.4171 × 10-22.8
AtMYB47'nhx5-1/nhx6-1 knock outs' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis AtNHX5 and AtNHX6 single and double knock out mutants
Adjusted p-valueLog2-fold change
1.8988 × 10-502.7
AtMYB47'smg7-1 pad4-1 double mutant' vs 'pad4-1 mutant'genotypeTranscription profiling by high throughput sequencing of Arabidopsis smg7 pad4 double mutant
Adjusted p-valueLog2-fold change
1.0213 × 10-9-2.7
AtMYB47'Spt4 knock down' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis RNAi knock-down plants of SPT4-1 and SPT4-2
Adjusted p-valueLog2-fold change
2.8146 × 10-92.7
AtMYB47'swp73b-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis swp73b-1 mutant
Adjusted p-valueLog2-fold change
4.0338 × 10-32.7
AtMYB47'pad4 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
3.9798 × 10-46-2.6
AtMYB47'lsm4 mutant' vs 'wild type' in 'Columbia ecotype'ecotype, genotypeTranscription profiling by high throughput sequencing of Arabidopsis lsm4-1 mutants and sad1/lsm5 double mutants
Adjusted p-valueLog2-fold change
6.1265 × 10-7-2.6
AtMYB47'dms4 mutant' vs 'wild type' at '21 day'age, genotypeTranscription profiling of Arabidopsis dms4-1, drd1-1 and drd1-6 mutant seedlings against wild-type to identify targets of IWR1-like transcription factor
Adjusted p-valueLog2-fold change
5.3603 × 10-62.6
AtMYB47'3 percent glucose and 1 micromolar indole-3-acetic acid' vs 'none'compoundTranscription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions
Adjusted p-valueLog2-fold change
4.0018 × 10-32.6
AtMYB47'systemically damaged by leafminer' vs 'control'growth conditionTranscription profiling by array of Arabidopsis leaves with localised or systemic damage by leafminer Liriomyza huidobrensis
Adjusted p-valueLog2-fold change
3.8133 × 10-182.5
AtMYB47'abscisic acids; 100 micromolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
9.6949 × 10-92.5
AtMYB47'swi3d mutant' vs 'wild type genotype'genotypeTranscript profiling of Arabidopsis thaliana swi3d mutant with inactivated SWI3D subunit of SWI/SNF complex
Adjusted p-valueLog2-fold change
6.5264 × 10-8-2.5
AtMYB47'AtRsgA-i homozygous knockout' vs 'wild type genotype'genotypeRNA-seq of Arabidopsis thaliana wild-type and a putative chloroplast ribosome biogenesis mutant AtRsgA homozygous knockout
Adjusted p-valueLog2-fold change
6.6747 × 10-8-2.5
AtMYB47'srk2dei triple mutant' vs 'wild type' in 'control'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
1.6967 × 10-5-2.5
AtMYB47'1 micromolar salicylic acid at ZT24' vs 'water at ZT24' at '3 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)
Adjusted p-valueLog2-fold change
7.8368 × 10-5-2.5
AtMYB47'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.2084 × 10-3-2.4
AtMYB47'mkk1;mkk2 knockout; none' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
1.5051 × 10-10-2.3
AtMYB47'warm/hot temperature regimen' vs 'none' in '35S:HSFA1b-RFP'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
2.7377 × 10-8-2.3
AtMYB47'camta1-3 mutant' vs 'wild type' in 'drought; root'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
9.2529 × 10-82.3
AtMYB47'clf28 mutant' vs 'wild type' in 'root'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
5.6988 × 10-62.3
AtMYB47'VIP2 overexpression' vs 'wild type genotype' at '0 hour'genotype, timeTranscriptome analysis of Arabidopsis VIRE2-INTERACTING PROTEIN2 Overexpressor in Agrobacterium-mediated plant transformation and abiotic stresses
Adjusted p-valueLog2-fold change
2.0631 × 10-52.3
AtMYB47'dehydration stress' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
2.2272 × 10-332.2
AtMYB47'35 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
1.7329 × 10-13-2.2
AtMYB47'wrky33 mutant; Botrytis cinerea 2100' vs 'wrky33 mutant; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
4.8679 × 10-5-2.2
AtMYB47'wild type; Botrytis cinerea 2100' vs 'wild type; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
3.0768 × 10-22.2
AtMYB47'nor1-1 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
3.319 × 10-24-2.1
AtMYB47'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'mannitol; 300 millimolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
2.4434 × 10-12-2.1
AtMYB47'Col-0 x Sei-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.8811 × 10-92.1
AtMYB47'light regimen for 6 hour' vs 'continuous dark (no light) regimen' in 'wild type'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
3.706 × 10-9-2.1
AtMYB47'60 minutes after cordycepin treatment' vs 'immediately after cordycepin treatment' in 'wild type genotype'genotype, sampling time pointTranscription profiling by array of a stably RNAi-silenced nuclear 5’-3’ exonuclease XRN3 mutant line in Arabidopsis thaliana after transcriptional inhibition with cordycepin
Adjusted p-valueLog2-fold change
9.419 × 10-7-2.1
AtMYB47'mbd4 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.716 × 10-6-2.1
AtMYB47'mbd6 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.0831 × 10-52.1
AtMYB47'phosphate-lacking medium' vs 'complete medium' in 'spx1,spx2 double mutant'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
7.9623 × 10-3-2.1
AtMYB47'wild type; Pseudomonas syringae pv. maculicola str. ES4326' vs 'wild type; mock'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance
Adjusted p-valueLog2-fold change
1.7443 × 10-22.1
AtMYB47'fls1-3 mutant' vs 'wild type'genotypeExpression data from Arabidopsis leaves
Adjusted p-valueLog2-fold change
2.7911 × 10-252
AtMYB47'42 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
1.3504 × 10-62
AtMYB47'1 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
6.1724 × 10-62
AtMYB47'35S::KLU' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis 35S::KLU shoots compared to wild type shoots
Adjusted p-valueLog2-fold change
5.003 × 10-52
AtMYB47'Piereis brassicae; larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
7.2689 × 10-5-2
AtMYB47'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
9.6733 × 10-52
AtMYB47'methyl jasmonate 0.1 micromolar' vs 'none' in 'jin1-9'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for myc2 after treatment with methyl jasmonate
Adjusted p-valueLog2-fold change
7.2437 × 10-32
AtMYB47'drought; wild type' at '0 hour' vs 'control; wild type' at '0 hour'environmental stress, genotype, timeTranscription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling
Adjusted p-valueLog2-fold change
1.5816 × 10-131.9
AtMYB47'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
1.5729 × 10-91.9
AtMYB47'water; des1' vs 'water; wild type'compound, genotypeExogenous Sulfide Reverses the Alteration of Transcriptional Profiling of the des1-1 Mutant (Arabidopsis thaliana)
Adjusted p-valueLog2-fold change
2.397 × 10-9-1.9
AtMYB47'Sei-0 x Col-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
4.3065 × 10-9-1.9
AtMYB47'sodium sulfide; des1' vs 'water; des1'compound, genotypeExogenous Sulfide Reverses the Alteration of Transcriptional Profiling of the des1-1 Mutant (Arabidopsis thaliana)
Adjusted p-valueLog2-fold change
6.8871 × 10-91.9
AtMYB47'dicamba; 7 millimolar' vs 'none'compoundTranscription profiling by array of Arabidopsis after treatment with dicamba
Adjusted p-valueLog2-fold change
2.9316 × 10-7-1.9
AtMYB47'siz1-3' vs 'wild type' in 'drought'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for siz1 after exposure to drought
Adjusted p-valueLog2-fold change
1.0731 × 10-51.9
AtMYB47'arr22-ox' vs 'wild type' in 'none'genotype, growth conditionTranscription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin
Adjusted p-valueLog2-fold change
1.1427 × 10-4-1.9
AtMYB47'coi1-2 mutant' vs 'wild type genotype' in 'none' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
1.6935 × 10-4-1.9
AtMYB47'dja6; dja5 double mutant' vs 'wild type genotype'genotypeRNA-seq of WT and dja6 dja5 mutant in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.0459 × 10-4-1.9
AtMYB47'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.1176 × 10-4-1.9
AtMYB47'OsRLCK253 transgenic' vs 'wild type'genotypeRice A20/AN1 zinc-finger containing stress-associated proteins (SAP1/11) and a receptor-like cytoplasmic kinase (OsRLCK253) interact via A20 zinc-finger and confer abiotic stress tolerance in transgenic Arabidopsis plants
Adjusted p-valueLog2-fold change
2.8928 × 10-31.9
AtMYB47'pp7l-1 loss of function mutant' vs 'wild type genotype'genotypeSERINE/THREONINE-PROTEIN PHOSPHATASE7-LIKE PP7L Regulates Chloroplast Development
Adjusted p-valueLog2-fold change
4.9074 × 10-3-1.9
AtMYB47'wild_type; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
1.5586 × 10-2-1.9
AtMYB47'Atwrky12-2' vs 'wild type'genotypeGene expression profiling of Arabidopsis Atwrky12 mutants stems
Adjusted p-valueLog2-fold change
2.6365 × 10-2-1.9
AtMYB47'CT101; 350 ppb ozone exposure for 2hr' vs 'CT101; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.8417 × 10-21.9
AtMYB47'drought; abi1td' at '0 hour' vs 'control; abi1td' at '0 hour'environmental stress, genotype, timeTranscription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling
Adjusted p-valueLog2-fold change
1.1238 × 10-211.8
AtMYB47'silver(1+) nitrate, 10 micromolar; N-benzyladenine, 3 micromolar' vs 'silver(1+) nitrate, 10 micromolar'stimulusEthylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway.
Adjusted p-valueLog2-fold change
9.1232 × 10-171.8
AtMYB47'sfr6-2' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
Adjusted p-valueLog2-fold change
4.3279 × 10-151.8
AtMYB47'trichostatin; 1 micromolar' vs 'none' in 'pUBI10::mCherry-GR-linker-WUS'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
1.143 × 10-6-1.8
AtMYB47'35S::LFY-GR' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis expressing LEAFY under the control of the 35S promoter
Adjusted p-valueLog2-fold change
7.9882 × 10-6-1.8
AtMYB47'cs26 mutant' vs 'wild type' in 'long day photoperiod'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods
Adjusted p-valueLog2-fold change
1.1202 × 10-51.8
AtMYB47'abi3-6 mutant' vs 'wild type' in '16 day'age, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 2]
Adjusted p-valueLog2-fold change
6.9261 × 10-5-1.8
AtMYB47'4.5 micromolar Naphtalenacetic acid and 50 micromolar antimycin A' vs 'none'treatmentExpression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue
Adjusted p-valueLog2-fold change
1.206 × 10-41.8
AtMYB47'3 percent glucose' vs 'none'compoundTranscription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions
Adjusted p-valueLog2-fold change
3.105 × 10-3-1.8
AtMYB47'mkk1 knockout; none' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
6.1112 × 10-31.8
AtMYB47'18 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei K1; avirulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.6064 × 10-21.8
AtMYB47'ceh1 mutant' vs 'wild type'genotypeTranscriptome of Arabidopsis thaliana ceh1 mutant
Adjusted p-valueLog2-fold change
3.5598 × 10-2-1.8
AtMYB47'ga1-3 gai-t6 rga-t2 rgl1-1 rgl2-1' vs 'wild type' in 'Pseudomonas syringae pv. tomato DC3000' at '12 hour'genotype, time, treatmentTranscription profiling by array of Arabidopsis DELLA mutants after treatment with flg22, methyl jasmonate, Alternaria brassicicola or Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
7.1702 × 10-19-1.7
AtMYB47'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.3175 × 10-11-1.7
AtMYB47'hos1-3 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis hos1-3 seedlings
Adjusted p-valueLog2-fold change
3.0559 × 10-8-1.7
AtMYB47'Mir-0 x Se-0' vs 'Se-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
2.6085 × 10-6-1.7
AtMYB47'60 minutes after cordycepin treatment' vs 'immediately after cordycepin treatment' in 'xrn3-8 mutant'genotype, sampling time pointTranscription profiling by array of a stably RNAi-silenced nuclear 5’-3’ exonuclease XRN3 mutant line in Arabidopsis thaliana after transcriptional inhibition with cordycepin
Adjusted p-valueLog2-fold change
1.2742 × 10-31.7
AtMYB47'ein2-1; Alternaria brassicicola' at '24 hours post infection' vs 'wild type; mock' at '24 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
5.5172 × 10-31.7
AtMYB47'methyl jasmonate 0.1 micromolar' vs 'none' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for myc2 after treatment with methyl jasmonate
Adjusted p-valueLog2-fold change
9.0332 × 10-3-1.7
AtMYB47'scrm-D;mute' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings
Adjusted p-valueLog2-fold change
1.4673 × 10-21.7
AtMYB47'beta-estradiol 5 micromolar' vs 'water' at 12hcompound, timeTranscription profiling by array of Arabidopsis with RNAi-mediated knockdown of RBR after treatment with beta estradiol
Adjusted p-valueLog2-fold change
1.9543 × 10-2-1.7
AtMYB47'PAP, 100 micromolar; lithium chloride, 100 millimolar; ATP, 1 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
3.2439 × 10-2-1.7
AtMYB47'mkk2 knockout; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'mkk2 knockout; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
4.2092 × 10-18-1.6
AtMYB47'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.9225 × 10-141.6
AtMYB47'light pulse at ZT18' vs 'control'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis exposed to a pulse of white light at ZT18 to study the effect of light on alternative splicing
Adjusted p-valueLog2-fold change
3.9978 × 10-8-1.6
AtMYB47'ozone; 350 nanoliter' vs 'none' in 'Cvi-0'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
2.756 × 10-71.6
AtMYB47'Sei-0 x Col F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.7132 × 10-6-1.6
AtMYB47'dexamethasone' vs 'none' in 'MKK9DD mutant; control'compound, genotype, growth conditionTranscription profiling by array of Arabidopsis MKK9DD (constitutively active MKK9 kinase mutant) overexpressing seedlings and Pi-starved wild type seedlings to identify the same regulated genes
Adjusted p-valueLog2-fold change
4.8604 × 10-6-1.6
AtMYB47'KZ-10 x Mrk-0' vs 'KZ-10'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
5.7873 × 10-41.6
AtMYB47'light pulse in the middle of the night' vs 'night time control'growth conditionRNA-seq of Arabidopsis seedlings with or without light pulses treatment in the middle of day or night against untreated controls to study how the light pulses control the phase of the circadian clock
Adjusted p-valueLog2-fold change
8.2549 × 10-41.6
AtMYB47'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
1.0208 × 10-3-1.6
AtMYB47'ahk2ahk3' vs 'wild type' in '1 degree celsius'genotype, temperatureTranscription profiling by array of genes regulated by ahk2 ahk3 in response to cold in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.1554 × 10-31.6
AtMYB47'osmotic stress (3h with 0.3 molar mannitol)' vs 'control' in 'leaf'growth condition, organism partTranscriptome Profiling of Roots and leaves Under High Osmotic Stress in Arabidopsis
Adjusted p-valueLog2-fold change
3.5009 × 10-3-1.6
AtMYB47'Pseudomonas syringae DC3000 COR- strain' vs 'mock' in 'wild type'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
9.5745 × 10-31.6
AtMYB47'24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei K1; avirulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.2488 × 10-2-1.6
AtMYB47'salicylic acid' vs 'Silwet' at time: '4 hours' in ecotype: 'Col-0'growth condition, time, ecotypeTranscription profiling by array of seven ecotypes of Arabidopsis thaliana after time course treatment with salicylic acid.
Adjusted p-valueLog2-fold change
2.3531 × 10-2-1.6
AtMYB47'wild type; Golovinomyces orontii infection' vs 'wild type; no infection' at 7 daygenotype, infect, timeTranscription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii
Adjusted p-valueLog2-fold change
2.8601 × 10-2-1.6
AtMYB47'pvip1; pvip2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for pvip1 and pvip2
Adjusted p-valueLog2-fold change
3.2147 × 10-21.6
AtMYB47'rts1-1' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for rts1
Adjusted p-valueLog2-fold change
4.8518 × 10-21.6
AtMYB47'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
3.9417 × 10-16-1.5
AtMYB47'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.7309 × 10-13-1.5
AtMYB47'wrky33 mutant; mock' vs 'wild type; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
4.0152 × 10-61.5
AtMYB47'50 micromolar abscisic acid' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
4.9129 × 10-6-1.5
AtMYB47'Bla-1 x Hh-0' vs 'Bla-1'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
3.6572 × 10-5-1.5
AtMYB47'high light; wild type' vs 'control; wild type'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
3.1515 × 10-4-1.5
AtMYB47'salicylic acid; 0.5 millimolar' vs 'none' in 'wild type genotype'compound, genotypeSalicylic acid-induced gene expression in wild-type Col-0 and mutant upl3-4 Arabidopsis thaliana plants.
Adjusted p-valueLog2-fold change
6.3537 × 10-4-1.5
AtMYB47'Pseudomonas syringae pv. Maculicola with effector AvrRpt2' at '6 hour' vs 'none'time, treatmentExpression profiling of Col-0 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
1.4986 × 10-3-1.5
AtMYB47'catalase2 mutant' vs 'wild type; transferred to air for 2 days in short day length regime'genotype, growth conditionTranscription profiling by array of Arabidopsis catalase 2 mutant in response to CO2 level and photoperiod
Adjusted p-valueLog2-fold change
2.2506 × 10-3-1.5
AtMYB47'coi1-2 mutant' vs 'wild type genotype' in 'Sclerotinia sclerotiorum' at '24 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
2.3417 × 10-3-1.5
AtMYB47'lithium chloride, 100 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
4.1225 × 10-31.5
AtMYB47"40 microampere of electric current for 10 second" vs "no electric current injection"growth conditionTranscription profiling by array of Arabidopsis leaves either under electric current injection or with distal wound against untreated controls
Adjusted p-valueLog2-fold change
1.0072 × 10-21.5
AtMYB47'wounding' at '1 hour' vs 'none' at '0 hour'injury, timeTranscriptional response to wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
2.0179 × 10-21.5
AtMYB47'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.8083 × 10-2-1.5
AtMYB47'iron; 100 micromolar' vs 'none' in 'bhlh100/101 double mutant; shoot'compound, genotype, organism partExpression data from Arabidopsis roots and shoots grown with or without iron
Adjusted p-valueLog2-fold change
8.5123 × 10-151.4
AtMYB47'fip37-4 LEC1:FIP37' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis fip37-4 LEC1:FIP37 seedlings
Adjusted p-valueLog2-fold change
6.2463 × 10-101.4
AtMYB47'abscisic acid; 50 micromolar' vs 'mock' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
5.4186 × 10-81.4
AtMYB47'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-3'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
4.0208 × 10-7-1.4
AtMYB47'Mir-0 x Se-0' vs 'Mir-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
1.8712 × 10-51.4
AtMYB47'low light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
4.7916 × 10-5-1.4
AtMYB47'20% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature'growth conditionTranscription profiling by array of Arabidopsis after growth at different temperatures
Adjusted p-valueLog2-fold change
1.4245 × 10-4-1.4
AtMYB47'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
1.575 × 10-31.4
AtMYB47'water deprivation' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after water deprivation
Adjusted p-valueLog2-fold change
1.6228 × 10-3-1.4
AtMYB47'vtc2' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for abi4 and/or vtc2
Adjusted p-valueLog2-fold change
7.7115 × 10-3-1.4
AtMYB47'dde2-2; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
1.1916 × 10-2-1.4
AtMYB47'gpt2 T-DNA mutant' vs 'wild type genotype' in 'low light intensity' at '1 day'genotype, growth condition, timeAcclimation of photosynthesis to changes in the environment results decreases oxidative stress in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.7533 × 10-21.4
AtMYB47'antimycin A; 50 micromolar; anac017-2' vs 'water; anac017-2'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
2.0234 × 10-21.4
AtMYB47'rao1-1 mutant' vs 'wild type' in 'antimycin A; 50 micromolar'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
2.455 × 10-2-1.4
AtMYB47'spch' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings
Adjusted p-valueLog2-fold change
2.4721 × 10-2-1.4
AtMYB47'eds16 mutant; Golovinomyces orontii infection' vs 'eds16 mutant; no infection' at 7 daygenotype, infect, timeTranscription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii
Adjusted p-valueLog2-fold change
3.2677 × 10-2-1.4
AtMYB47"rps10 RNAi; late onset of silencing (P3)" vs "none; wild type"RNA interference, phenotypeMicroarray data sets of Arabidopsis rps10 mutants with RNAi-silenced expression of mitoribosomal S10 protein
Adjusted p-valueLog2-fold change
3.3811 × 10-21.4
AtMYB47'nudt7-1 sid2-1' vs 'wild type'genotypeTranscription profiling of EDS1- and SA-dependent genes in Arabidopsis nudt7-1
Adjusted p-valueLog2-fold change
2.4459 × 10-111.3
AtMYB47'med5a/5b ref8-1 triple mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidospsis ref8-1, med5a/5b, and med5a/5b ref8-1 mutants
Adjusted p-valueLog2-fold change
3.945 × 10-7-1.3
AtMYB47'gul2-1 bri1-5 double mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids
Adjusted p-valueLog2-fold change
1.1503 × 10-61.3
AtMYB47'estradiol; 2 micromolar' vs 'DMSO' at '24 hour'compound, timeTranscription profiling by array of Arabidopsis expressing DUO1 as a result of induction with estradiol
Adjusted p-valueLog2-fold change
3.942 × 10-6-1.3
AtMYB47'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.3259 × 10-4-1.3
AtMYB47'GVGdvl4' vs 'control' in 'dexamethasone'compound, genotypeTranscription profiling by array of Arabidopsis overexpressing dvl4 after treatment with dexamethasone
Adjusted p-valueLog2-fold change
4.818 × 10-4-1.3
AtMYB47'clf28 mutant' vs 'wild type' in 'silique'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
5.1776 × 10-41.3
AtMYB47'sodium chloride; 50 millimolar; wild type genotype' vs 'none; ; wild type genotype'compound, genotypeTranscription profiling by array of Arabidopsis wild type and polyamine oxidase 5 loss-of-function mutant exposed to sodium chloride
Adjusted p-valueLog2-fold change
1.6909 × 10-3-1.3
AtMYB47'RNAi-MBS2/mbs1-1 knockdown' vs 'fluorescent (flu) mutant' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response
Adjusted p-valueLog2-fold change
1.6968 × 10-31.3
AtMYB47'none; atpao5-3 mutant' vs 'none; wild type genotype'compound, genotypeTranscription profiling by array of Arabidopsis wild type and polyamine oxidase 5 loss-of-function mutant exposed to sodium chloride
Adjusted p-valueLog2-fold change
2.5454 × 10-3-1.3
AtMYB47'Erysiphe orontii' vs 'none' at '96 hour'infect, timeTranscription profiling by array of Arabidopsis after inoculation with Erysiphe orontii
Adjusted p-valueLog2-fold change
3.0542 × 10-31.3
AtMYB47'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 gpa1-4 double mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
3.1332 × 10-3-1.3
AtMYB47'50 micromolar antimycin A' vs 'none'treatmentExpression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue
Adjusted p-valueLog2-fold change
4.174 × 10-31.3
AtMYB47'arid2-/-; arid3-/-; arid4-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
4.5017 × 10-3-1.3
AtMYB47'Pseudomonas syringae DC3000 COR-deltahrpS strain' vs 'mock' in 'wild type'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
4.5422 × 10-3-1.3
AtMYB47'wrky33 mutant; Botrytis cinerea 2100' vs 'wild type; Botrytis cinerea 2100'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
9.5854 × 10-31.3
AtMYB47'rao1-2 mutant' vs 'wild type' in 'antimycin A; 50 micromolar'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
1.242 × 10-2-1.3
AtMYB47'Pseudomonas syringae DC3000 COR-avrPphB strain' vs 'mock' in 'upf1-5 mutant'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
1.3352 × 10-21.3
AtMYB47'12 hour (dark)' vs '0 hour (light)'growth condition, timeTranscription profiling of diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
Adjusted p-valueLog2-fold change
1.6094 × 10-21.3
AtMYB47'sub-zero acclimation' vs 'cold acclimation' in 'Te-0' at '8 hour'ecotype, environmental stress, timeTranscription profiling by array of three Arabidopsis accessions under acclimation to sub-zero temperature at -3 degree Celsius after cold acclimation
Adjusted p-valueLog2-fold change
2.3925 × 10-2-1.3
AtMYB47'coi1-2 mutant' vs 'wild type genotype' in 'none' at '24 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
2.9789 × 10-2-1.3
AtMYB47'T-DNA knock out line 1' vs 'wild type' in 'Col-0'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for At2g19270
Adjusted p-valueLog2-fold change
3.1643 × 10-21.3
AtMYB47'TaFLS overexpression line 2 (OE2)' vs 'wild type'genotypeExpression data from Arabidopsis leaves
Adjusted p-valueLog2-fold change
3.4547 × 10-2-1.3
AtMYB47'scrm-D' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings
Adjusted p-valueLog2-fold change
4.0154 × 10-21.3
AtMYB47'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.1555 × 10-71.2
AtMYB47'drought' vs 'control' in 'camta1-3 mutant; root'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
2.551 × 10-7-1.2
AtMYB47'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
6.8762 × 10-71.2
AtMYB47'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
3.0504 × 10-6-1.2
AtMYB47'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.3769 × 10-51.2
AtMYB47'auxin resistant pIAA26::IAA26-P108H-GFP transgenic' vs 'control'genotypeTranscription profiling by high throughput sequencing of Arabidopsis pIAA26::IAA26-P108H-GFP transgenic plants
Adjusted p-valueLog2-fold change
7.517 × 10-51.2
AtMYB47'low light; wild type' vs 'control; wild type'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
1.6955 × 10-4-1.2
AtMYB47'Agrobacterium tumefaciens C58' vs 'none'infectTranscription profiling by array of injured Arabidopsis after infection with different strains of Agrobacterium tumefaciens
Adjusted p-valueLog2-fold change
3.2052 × 10-41.2
AtMYB47'fus3-3 mutant' vs 'wild type' in '12 day; Col-0'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
5.3893 × 10-4-1.2
AtMYB47'ahk2ahk3' vs 'wild type' in '23 degree celsius'genotype, temperatureTranscription profiling by array of genes regulated by ahk2 ahk3 in response to cold in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
8.0198 × 10-4-1.2
AtMYB47'Agrobacterium tumefaciens GV3101' vs 'none'infectTranscription profiling by array of injured Arabidopsis after infection with different strains of Agrobacterium tumefaciens
Adjusted p-valueLog2-fold change
9.3282 × 10-4-1.2
AtMYB47'high light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
1.2357 × 10-3-1.2
AtMYB47'35S:MBS1 overexpression' vs 'fluorescent (flu) mutant' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response
Adjusted p-valueLog2-fold change
1.8981 × 10-31.2
AtMYB47'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
2.2963 × 10-3-1.2
AtMYB47'hyl1; atxr5; atxr6 triple loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
4.9852 × 10-3-1.2
AtMYB47'mbs1-1 mutant' vs 'fluorescent (flu) mutant' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response
Adjusted p-valueLog2-fold change
6.4436 × 10-31.2
AtMYB47'clf28 mutant' vs 'wild type' in 'shoot'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
8.9557 × 10-31.2
AtMYB47'sub-zero acclimation' vs 'cold acclimation' in 'Col-0' at '24 hour'ecotype, environmental stress, timeTranscription profiling by array of three Arabidopsis accessions under acclimation to sub-zero temperature at -3 degree Celsius after cold acclimation
Adjusted p-valueLog2-fold change
9.6006 × 10-3-1.2
AtMYB47'phyA-1 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis phyA-1 mutants
Adjusted p-valueLog2-fold change
1.0169 × 10-21.2
AtMYB47'oxt6:AtCPSF30' vs 'wild type'genotypeA polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.4068 × 10-21.2
AtMYB47'sid2-1 mutant; mock' vs 'wild type; mock'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance
Adjusted p-valueLog2-fold change
2.9596 × 10-2-1.2
AtMYB47'KO line' vs 'wild type' in 'Col-0'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for At2g19270
Adjusted p-valueLog2-fold change
3.1529 × 10-71.1
AtMYB47'letm1-1 homozygous, letm2-1 heterozygous double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis wild-type seedlings and either single or double knock-out mutants of LETM1 or LETM2
Adjusted p-valueLog2-fold change
2.2966 × 10-61.1
AtMYB47'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-4'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
3.9382 × 10-51.1
AtMYB47'phosphate-lacking medium' vs 'complete medium' in 'wild type'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
4.0129 × 10-5-1.1
AtMYB47'KZ-10 x Mrk-0' vs 'Mrk-0'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
5.613 × 10-51.1
AtMYB47'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'wild type'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
4.5833 × 10-4-1.1
AtMYB47'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'none'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
6.5172 × 10-41.1
AtMYB47'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
1.141 × 10-31.1
AtMYB47'drought stress' vs 'none' in 'ABF3 overexpression' at '2 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress
Adjusted p-valueLog2-fold change
2.934 × 10-31.1
AtMYB47'sid2-2; Alternaria brassicicola' at '24 hours post infection' vs 'wild type; mock' at '24 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
3.2768 × 10-3-1.1
AtMYB47'salicylic acid' vs 'control' in 'npr1 sni1 brca2a mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for npr1, sni1, ssn2 and/or brca2a after treatment with salicylic acid
Adjusted p-valueLog2-fold change
4.1285 × 10-3-1.1
AtMYB47'beta-estradiol; CHLM overexpression' vs 'beta-estradiol; control'compound, phenotypeExpression data from Arabidopsis thaliana seedlings with altered enzymes activity of the tetrapyrrole biosynthesis pathway
Adjusted p-valueLog2-fold change
5.1522 × 10-3-1.1
AtMYB47'antimycin A; 50 micromolar; anac017-1' vs 'water; anac017-1'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
1.0578 × 10-21.1
AtMYB47'det1-1 mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
1.4907 × 10-2-1.1
AtMYB47'se-2 loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
1.5855 × 10-2-1.1
AtMYB47'se-2; atxr5; atxr6 triple loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
1.6792 × 10-2-1.1
AtMYB47'ANAC017 OEa' vs 'wild type genotype' at '0 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
1.9119 × 10-21.1
AtMYB47'sid2 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
2.067 × 10-21.1
AtMYB47'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
2.1993 × 10-21.1
AtMYB47'Golovinomyces orontii; 8 hour' vs 'none; 0 hour' in 'wrky18, wrky40 double mutant'genotype, infect, timeTranscription profiling by array of Arabidopsis thaliana WRKY18/40 double knock out infected with Golovinomyces orontii
Adjusted p-valueLog2-fold change
2.2746 × 10-2-1.1
AtMYB47'gpt2 T-DNA mutant' vs 'wild type genotype' in 'high light intensity' at '1 day'genotype, growth condition, timeAcclimation of photosynthesis to changes in the environment results decreases oxidative stress in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.8066 × 10-2-1.1
AtMYB47'wild type; 16 degree celsius' vs 'wild type; 23 degree celsius'genotype, temperaturePFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis
Adjusted p-valueLog2-fold change
3.7708 × 10-21.1
AtMYB47'oas-a1.1' vs 'wild type' in 'CdCl2-treated shoot' at '24 hour'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis mutant for oas-a1 after treatment with cadmium chloride
Adjusted p-valueLog2-fold change
4.2134 × 10-2-1.1
AtMYB47'4 days salt treatment' vs 'control'growth conditionTranscription profiling by array of Arabidopsis leaves under the condition of salt-induced senescence
Adjusted p-valueLog2-fold change
4.406 × 10-2-1.1
AtMYB47'Cax1/Cax3 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis cax1/cax3 double mutants
Adjusted p-valueLog2-fold change
5.8301 × 10-8-1
AtMYB47'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.4296 × 10-6-1
AtMYB47'abi4-102' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for vtc1 or abi4
Adjusted p-valueLog2-fold change
1.8711 × 10-5-1
AtMYB47'chr11-1 chr17-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis chr11-1 chr17-1 mutants
Adjusted p-valueLog2-fold change
9.8064 × 10-5-1
AtMYB47'low phosphate' vs 'control' in 'none; wild type'compound, genotype, growth conditionTranscription profiling by array of Arabidopsis MKK9DD (constitutively active MKK9 kinase mutant) overexpressing seedlings and Pi-starved wild type seedlings to identify the same regulated genes
Adjusted p-valueLog2-fold change
1.5878 × 10-4-1
AtMYB47'safener' vs 'none' in 'sid2-2 mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2 or tga2, tga3, tga5 and tga6 after treatment with mefenpyr and isoxadifen
Adjusted p-valueLog2-fold change
1.6608 × 10-4-1
AtMYB47'Ler x C24 F1 hybrid' vs 'C24 ecotype'genotypeTranscription profiling by high throughput sequencing of Arabidopsis Ler and C24 ecotypes and their reciprocal hybrids
Adjusted p-valueLog2-fold change
2.0578 × 10-4-1
AtMYB47'30% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature'growth conditionTranscription profiling by array of Arabidopsis after growth at different temperatures
Adjusted p-valueLog2-fold change
2.9586 × 10-41
AtMYB47'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'spx1,spx2 double mutant'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
3.5044 × 10-41
AtMYB47'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '8 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
3.5528 × 10-4-1
AtMYB47''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 10 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
5.6091 × 10-4-1
AtMYB47'Bla-1 x Hh-0' vs 'Hh-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
6.2644 × 10-4-1
AtMYB47'C24 x Ler F1 hybrid' vs 'C24 ecotype'genotypeTranscription profiling by high throughput sequencing of Arabidopsis Ler and C24 ecotypes and their reciprocal hybrids
Adjusted p-valueLog2-fold change
4.2274 × 10-3-1
AtMYB47'Te; 350 ppb ozone exposure for 2hr' vs 'Te; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.4156 × 10-3-1
AtMYB47'serrate-1 mutant' vs 'wild type'genotypeTranscription profiling by array of serrate-1 mutant Arabidopsis seedlings
Adjusted p-valueLog2-fold change
8.3979 × 10-3-1
AtMYB47'Pseudomonas syringae pv tomato DC3000(avrRpt2)' vs 'none' in 'gh3.5-1D heterozygous mutant'genotype, infectTranscription profiling by array of Arabidopsis heterozygous mutant for gh3.5 after inoculation with Pseudomonas syringae pv tomato DC3000(avrRpt2) against wild type counterparts and uninfected controls
Adjusted p-valueLog2-fold change
1.1184 × 10-21
AtMYB47'spx1,spx2 double mutant' vs 'wild type' in 'phosphate-lacking medium'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
1.1669 × 10-21
AtMYB47'Plasmodiophora brassicae' vs 'none' at '10 day'infect, timePlasmodiophora brassicae infection of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.2417 × 10-2-1
AtMYB47'SIZ1' vs 'wild type genotype'genotypeTranscription profiling by array of three Arabidopsis knockouts against wild type controls to study the influence of ubiquitin-like proteases in plant transcriptional modulation
Adjusted p-valueLog2-fold change
1.3419 × 10-2-1
AtMYB47'pnp1-1' vs 'wild type' in 'nutrient medium minus phosphate' at '3 hour'genotype, growth condition, timeTranscription profiling by array of Arabidopsis mutant for pnp after phosphate deprivation
Adjusted p-valueLog2-fold change
2.1505 × 10-2-1
AtMYB47'bli-1 -/-; ire1b -/-' vs 'wild type genotype'genotypeBLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.7627 × 10-2-1
AtMYB47'Fusarium oxysporum' vs 'none' in 'pft1 mutant'genotype, infectTranscription profiling by array of Arabidopsis mutant for pft1 after infection with Fusarium oxysporum
Adjusted p-valueLog2-fold change
2.838 × 10-2-1
AtMYB47'C24; 350 ppb ozone exposure for 2hr' vs 'C24; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.2646 × 10-21
AtMYB47'antimycin A; 50 micromolar' vs 'water' in 'rao1-1 mutant'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
3.4076 × 10-2-1
AtMYB47'Pseudomonas syringae DC3000 COR- strain' vs 'mock' in 'upf1-5 mutant'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
3.591 × 10-21
AtMYB47'methyl jasmonate' vs 'mock' in 'wild type'compound, genotypeExpression profiling of wild-type Arabidopsis and an activation-tagged jaz7-1D line.
Adjusted p-valueLog2-fold change
4.5018 × 10-2-1
AtMYB47'1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '0 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)