7 | | AT1G21250 | 'tcx2; TMO5:3xGFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
6.9 | | AT1G21250 | 'salicylic acid' vs 'none' in 'sdh1 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for sdh1 after treatment with salicylic acid |
6.5 | | AT1G21250 | 'dicamba; 7 millimolar' vs 'none' | compound | Transcription profiling by array of Arabidopsis after treatment with dicamba |
6.4 | | AT1G21250 | 'salicylic acid' vs 'none' in 'wild type' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for sdh1 after treatment with salicylic acid |
5.8 | | AT1G21250 | 'bleomycin and 2, 6-dichloroisonicotinic acid' vs 'none' | stimulus | Transcription profiling by array of Arabidopsis seedlings grown after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment to identify synergistically induced defence genes |
5.3 | | AT1G21250 | 'MYB96 overexpression' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing MYB96 or myb96 knock out mutants |
5.2 | | AT1G21250 | 'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
4.8 | | AT1G21250 | 'csn3-1 mutant' vs 'wild type' in 'light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
-4.8 | | AT1G21250 | 'microRNA targeting Umkirch-3 allele of At5g41750' vs 'control' | genotype | Transcription profiling of Arabidopsis Umkirch-1/Umkirch-3 hybrid plants compared to siblings carrying a microRNA targeting the Umkirch-3 allele of At5g41750 |
4.8 | | AT1G21250 | 'csn4-1 mutant' vs 'wild type' in 'light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
4.8 | | AT1G21250 | 'ceh1 mutant' vs 'wild type' | genotype | Transcriptome of Arabidopsis thaliana ceh1 mutant |
4.7 | | AT1G21250 | 'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-1 mutant' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2 |
4.7 | | AT1G21250 | '1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '3 hour' | time, treatment | Transcription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening) |
4.6 | | AT1G21250 | 'KZ-10 x Mrk-0' vs 'Mrk-0' | ecotype | Transcription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents |
4.6 | | AT1G21250 | 'mkk2 knockout; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'mkk2 knockout; none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH |
4.5 | | AT1G21250 | '2, 6-dichloroisonicotinic acid' vs 'none' | stimulus | Transcription profiling by array of Arabidopsis seedlings grown after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment to identify synergistically induced defence genes |
4.5 | | AT1G21250 | 'ozone 500 parts per billion' vs 'control' | growth condition | Arabidopsis thaliana response to ozone |
4.5 | | AT1G21250 | 'ozone 500 parts per billion' vs 'control' | growth condition | Functional Genomics of Ozone Stress in Arabidopsis. |
4.5 | | AT1G21250 | 'scrm-D;mute' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings |
4.4 | | AT1G21250 | 'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-2 mutant' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2 |
4.4 | | AT1G21250 | 'scrm-D' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings |
4.3 | | AT1G21250 | 'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
-4.2 | | AT1G21250 | 'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '24 hour' | phenotype, time | Transcription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response |
4.2 | | AT1G21250 | 'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '12 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-4 | | AT1G21250 | 'fmo1 mutant' vs 'wild type genotype' in 'pipecolic acid; 10 micromolar' | block, compound, genotype | Transcriptional response of Arabidopsis thaliana to exogenous application of pipecolic acid |
3.8 | | AT1G21250 | 'csn3-1 mutant' vs 'wild type' in 'dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
3.8 | | AT1G21250 | 'mkk1 knockout; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'mkk1 knockout; none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH |
3.8 | | AT1G21250 | 'E2Fa-DPa overexpression' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing E2Fa-Dpa |
3.7 | | AT1G21250 | 'Phytophthora parasitica' vs 'none' in 'wild type genotype' | genotype, infect | RNA-sequence of Arabidopsis thaliana lines gsnor1 and Col-0 post infection of Phytophthora parasitica against controls |
3.7 | | AT1G21250 | 'Plectosphaerella cucumerina inoculation' vs 'control' in 'agb1-1 mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina |
3.7 | | AT1G21250 | 'drought environment' vs 'normal watering' in 'vtc2.5 mutant' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
-3.6 | | AT1G21250 | 'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day' | genotype, time | Transcription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture. |
3.6 | | AT1G21250 | '35S::WRKY23-SRDX' vs 'wild type genotype' in 'auxin; 10 micromolar' | compound, genotype | Microarray designed to find PIN polarity regulators downstream of TIR1/AFB |
3.6 | | AT1G21250 | 'met1 mutant' vs 'wild type' at '4 hour' | genotype, time | Transcription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours |
3.6 | | AT1G21250 | 'cabbage leaf curl virus infected' vs 'mock infected' | infect | Transcription profiling by array of Arabidopsis infected with geminivirus Cabbage leaf curl virus |
3.6 | | AT1G21250 | '2,6-dichloroisonicotinic acid' vs 'none' in 'wild type' at '2 day' | compound, genotype, time | Transcription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid |
3.5 | | AT1G21250 | 'mechanical stimulus - water from spray bottle; 25 minute' vs 'none; 0 minute' in 'myc324' | genotype, stimulus, time | RNAseq analysis of early touch responses in myc234 mutants in Arabidopsis |
-3.5 | | AT1G21250 | 'low light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)' | environmental stress, genotype | Transcription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light |
3.5 | | AT1G21250 | 'wild_type; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'wild_type; none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH |
3.4 | | AT1G21250 | 'Mir-0 x Se-0' vs 'Mir-0' | ecotype | Transcription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents |
3.4 | | AT1G21250 | 'csn4-1 mutant' vs 'wild type' in 'dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
-3.4 | | AT1G21250 | 'low light; wild type' vs 'control; wild type' | environmental stress, genotype | Transcription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light |
3.4 | | AT1G21250 | 'Phytophthera infestans' vs 'none' at '24 hour' | infect, time | Transcription profiling by array of Arabidopsis after infection with Phytophthera infestans |
-3.4 | | AT1G21250 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; leaf' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
3.4 | | AT1G21250 | 'mkk1;mkk2 knockout; none' vs 'wild_type; none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH |
3.3 | | AT1G21250 | 'siz1-3' vs 'wild type' in 'control' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for siz1 after exposure to drought |
3.3 | | AT1G21250 | 'pvip1; pvip2 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for pvip1 and pvip2 |
-3.2 | | AT1G21250 | 'brm-1 ref6-1' vs 'wild type' | genotype | Transcription profiling by high throughput sequencing of BRAHMA (BRM) and H3K27 demethylase (REF6) mutants in Arabidopsis |
3.2 | | AT1G21250 | 'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type' | compound, genotype | Transcription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment |
3.2 | | AT1G21250 | 'KZ-10 x Mrk-0' vs 'KZ-10' | ecotype | Transcription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents |
3.2 | | AT1G21250 | 'Plectosphaerella cucumerina inoculation' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina |
-3.2 | | AT1G21250 | 'from low light to high light; wild type' vs 'control; wild type' | environmental stress, genotype | Transcription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light |
3.1 | | AT1G21250 | '24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-3.1 | | AT1G21250 | 'salt and heat stress' vs 'none' | environmental stress | Transcription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress |
3.1 | | AT1G21250 | 'ga1-3 mutant' vs 'wild type' in 'flower bud' | genotype, organism part | Transcription profiling of Arabidopsis seed and flowers of ga1-3 mutant |
3.1 | | AT1G21250 | 'Rhizoctonia solani AG8' vs 'mock' | infect | Expression data in whole Arabidopsis seedlings after treatment with Rhizoctonia solani AG8 and AG2-1 |
3 | | AT1G21250 | '35 day' vs '29 day' | age | RNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence |
3 | | AT1G21250 | '57 day' vs '29 day' | age | RNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence |
3 | | AT1G21250 | '350 ppb ozone exposure for 2hr' vs 'control' in 'coi1-16 ein2 sid2' | genotype, growth condition | RNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling |
3 | | AT1G21250 | 'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf' | developmental stage, infect, organism part, stimulus | RNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive) |
3 | | AT1G21250 | 'low phosphate' vs 'control' in 'none; wild type' | compound, genotype, growth condition | Transcription profiling by array of Arabidopsis MKK9DD (constitutively active MKK9 kinase mutant) overexpressing seedlings and Pi-starved wild type seedlings to identify the same regulated genes |
3 | | AT1G21250 | 'seu-3 ant-1 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for seuss and/or aintegumenta |
3 | | AT1G21250 | 'seu-3 ant-1 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for ant1 and seu3 |
3 | | AT1G21250 | 'transgenics over expressing LecRKVI.2 (OH1)' vs 'wild type' | genotype | Transcriptome profiling of LecRKVI.2 over-expressor plants. |
3 | | AT1G21250 | 'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
3 | | AT1G21250 | '3,5-dichloroanthranilic acid' vs 'none' in 'wild type' at '2 day' | compound, genotype, time | Transcription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid |
2.9 | | AT1G21250 | '24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-2.9 | | AT1G21250 | 'DCC1 mutant' vs 'wild type genotype' | genotype | Thioredoxin DCC1 regulates shoot regeneration through modulating multiple genes expression by RNA-seq analyses in Arabidopsis |
2.9 | | AT1G21250 | 'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wild type' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2 |
2.9 | | AT1G21250 | 'siz1-3' vs 'wild type' in 'drought' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for siz1 after exposure to drought |
-2.9 | | AT1G21250 | 'from low light to high light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)' | environmental stress, genotype | Transcription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light |
2.9 | | AT1G21250 | '12 hour (dark)' vs '0 hour (light)' | growth condition, time | Transcription profiling of diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves |
2.9 | | AT1G21250 | 'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '12 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
2.9 | | AT1G21250 | 'erf104 knockout; none' vs 'Col-0; none' | compound, genotype | Transcription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6 |
-2.8 | | WAK1 | 'dja6; dja5 double mutant' vs 'wild type genotype' | genotype | RNA-seq of WT and dja6 dja5 mutant in Arabidopsis thaliana |
2.8 | | AT1G21250 | '42 day' vs '29 day' | age | RNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence |
2.8 | | AT1G21250 | 'mechanical stimulus - water from spray bottle; 25 minute' vs 'none; 0 minute' in 'wild type genotype' | genotype, stimulus, time | RNAseq analysis of early touch responses in myc234 mutants in Arabidopsis |
2.8 | | AT1G21250 | 'sav3-2' vs 'wild type' in 'continuous white light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for sav after an hour of simulated shade. |
-2.8 | | AT1G21250 | '35S::C2' vs 'control' in 'methyl jasmonate' | compound, genotype | Transcription profiling by array of Arabidopsis expressing genimivirus C2 under the control of the 35S promoter after treatment with methyl jasmonate |
-2.8 | | AT1G21250 | 'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; shoot' | genotype, growth condition, organism part | Transcription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation |
2.7 | | AT1G21250 | 'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant' | compound, genotype | Transcription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment |
-2.7 | | AT1G21250 | 'heat stress' vs 'none' | environmental stress | Transcription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress |
2.7 | | AT1G21250 | 'cycloheximide' vs 'dimethyl sulfoxide' in '60 micromolar' | compound | Transcription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes |
2.7 | | AT1G21250 | 'Pseudomonas syringae pv tomato DC3000(avrRpt2)' vs 'none' in 'gh3.5-1D heterozygous mutant' | genotype, infect | Transcription profiling by array of Arabidopsis heterozygous mutant for gh3.5 after inoculation with Pseudomonas syringae pv tomato DC3000(avrRpt2) against wild type counterparts and uninfected controls |
2.7 | | AT1G21250 | 'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
2.7 | | AT1G21250 | 'drought environment' vs 'normal watering' in 'vtc2 mutant' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
-2.6 | | AT1G21250 | 'atphb3 ANAC017' vs 'wild type' | age, genotype | Transcription profiling by high throughput sequencing of Arabidopsis mutants that are defective in mitochondrial proteins |
2.6 | | AT1G21250 | 'letm1-2 homozygous, letm2-1 heterozygous double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis wild-type seedlings and either single or double knock-out mutants of LETM1 or LETM2 |
-2.6 | | AT1G21250 | '37 degrees celsius' vs '20 degrees celsius' | compound, temperature | Transcription profiling by array of Arabidopsis after heat shock or treatment with tunicamycin or L-azetidine-2-carboxylic acid |
-2.6 | | AT1G21250 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 mutant; leaf' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
2.5 | | AT1G21250 | '24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
2.5 | | AT1G21250 | 'Blumeria graminis f. sp. hordei K1; avirulent; 18 hour' vs 'none; wild type phenotype; 18 hour' | infect, phenotype, time | Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant. |
2.5 | | AT1G21250 | 'wild type; Pseudomonas syringae pv. maculicola str. ES4326' vs 'wild type; mock' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance |
-2.5 | | AT1G21250 | '30% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature' | growth condition | Transcription profiling by array of Arabidopsis after growth at different temperatures |
-2.5 | | AT1G21250 | 'efr-1; elf18' at '10 hour' vs 'wild type; elf18' at '10 hour' | genotype, time, treatment | Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2. |
-2.5 | | AT1G21250 | '2 hour; excess light' vs '0 hour; low light' in 'hsfa1dhsfa2hsfa3 mutant' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
2.5 | | AT1G21250 | '1 micromolar salicylic acid at ZT24' vs 'water at ZT24' at '3 hour' | time, treatment | Transcription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening) |
2.5 | | AT1G21250 | 'camta1/2/3 mutant; grown at 22 C' vs 'wild type; grown at 22 C' | genotype, growth condition | Expression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants |
2.5 | | AT1G21250 | 'tga2;tga5;tga6 mutant; none' vs 'Col-0; none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for tga2, tga5 and tga6 after treatment with phytoprostane or 12-oxo-phytodienoic acid |
2.5 | | AT1G21250 | 'tga2;tga5;tga6 mutant; 12-oxo-phytodienoic acid' vs 'Col-0; 12-oxo-phytodienoic acid' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for tga2, tga5 and tga6 after treatment with phytoprostane or 12-oxo-phytodienoic acid |
2.5 | | AT1G21250 | 'Rhizoctonia solani AG2-1' vs 'mock' | infect | Expression data in whole Arabidopsis seedlings after treatment with Rhizoctonia solani AG8 and AG2-1 |
2.5 | | AT1G21250 | 'Sclerotinia sclerotiorum' vs 'none' in 'coi1-2 mutant' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
2.5 | | AT1G21250 | '5 day; naphthaleneacetic acid' vs '2 day; naphthaleneacetic acid' in 'stem tissue' | growth condition, organism part, time | Transcription profiling by array of Arabidopsis stem tissues after treatment with naphthaleneacetic acid |
2.4 | | AT1G21250 | '12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
2.4 | | AT1G21250 | '12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
2.4 | | AT1G21250 | ''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 6 hour' vs 'none; 0 hour' in 'wild type genotype' | genotype, infect, time | Expression profiling of Col-0 and rps2 treated with Psm:AvrRpt2 |
2.4 | | AT1G21250 | 'cycloheximide (60 micromolar) and dexamethasone (60 micromolar)' vs 'dimethyl sulfoxide; 60 micromolar' | compound | Transcription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes |
2.4 | | AT1G21250 | '50 micromolar abscisic acid' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
-2.4 | | AT1G21250 | 'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'spx1,spx2 double mutant' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
2.4 | | AT1G21250 | 'sav3-2' vs 'wild type' in 'simulated shade for 1 hour' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for sav after an hour of simulated shade. |
2.4 | | AT1G21250 | 'actin2-5' vs 'wild type' | genotype | Actin Cytoskeleton Integrates Auxin and Brassinosteroid Signaling in Plants. |
2.4 | | AT1G21250 | "rps10 RNAi; late onset of silencing (P3)" vs "none; wild type" | RNA interference, phenotype | Microarray data sets of Arabidopsis rps10 mutants with RNAi-silenced expression of mitoribosomal S10 protein |
2.4 | | AT1G21250 | 'sodium chloride; 120 millimolar' vs 'control; 0 millimolar' in 'wild type' at '24 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis rsa1-1 mutants under salt stress |
-2.4 | | AT1G21250 | 'water deprivation' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation |
2.3 | | AT1G21250 | '10 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
-2.3 | | AT1G21250 | 'excess light; none; 2 hour' vs 'low light; none; 0 hour' | compound, growth condition, time | Transcription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB |
2.3 | | AT1G21250 | 'Bla-1 x Hh-0' vs 'Bla-1' | ecotype | Transcription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents |
-2.3 | | AT1G21250 | 'psad1-1 stn7-1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for psae1, psad1 or stn7, or double mutant for psae1 and stn7 or psad1 and stn7 |
2.3 | | AT1G21250 | 'camta2/3 mutant; grown at 22 C' vs 'wild type; grown at 22 C' | genotype, growth condition | Expression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants |
-2.3 | | AT1G21250 | '0.1 mM nitrate' vs '10 mM nitrate' in 'wild type genotype' | genotype, growth condition | Transcriptional profiling of Arabidopsis constitutively expressing Medicago truncatula NRT1 PTR FAMILY 1.7 |
-2.3 | | AT1G21250 | 'low water potential stress' vs 'control' in 'hai1-2 mutant' | genotype, growth condition | Comparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant |
2.3 | | AT1G21250 | 'MtNPF1.7 expression' vs 'wild type genotype' in '0.1 mM nitrate' | genotype, growth condition | Transcriptional profiling of Arabidopsis constitutively expressing Medicago truncatula NRT1 PTR FAMILY 1.7 |
-2.3 | | AT1G21250 | 'Agrobacterium tumefaciens C58' vs 'none' | infect | Transcription profiling by array of Arabidopsis after infection with Agrobacterium tumefaciens and tumour development |
-2.3 | | AT1G21250 | 'dexamethasone; 10 micromolar' vs 'none' | compound | Genome-wide analysis of genes regulated by ARR22 overexpression. |
2.3 | | AT1G21250 | '35S::ERF104; none' vs 'Col-0; none' | compound, genotype | Transcription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6 |
2.3 | | AT1G21250 | '3,5-dichloroanthranilic acid' vs 'none' in 'npr1-3' at '2 day' | compound, genotype, time | Transcription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid |
2.2 | | AT1G21250 | '18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
2.2 | | AT1G21250 | 'Laccaria bicolor' vs 'none' | infect | Transcription profiling of Arabidopsis thaliana leaves as reaction to fungi (Laccaria bicolor) infection of the roots |
2.2 | | AT1G21250 | 'wrky33 mutant; Botrytis cinerea 2100' vs 'wrky33 mutant; mock' | genotype, infect | WRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation |
2.2 | | AT1G21250 | 'Mir-0 x Se-0' vs 'Se-0' | ecotype | Transcription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents |
2.2 | | AT1G21250 | '18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
2.2 | | AT1G21250 | 'sid2-1 mutant; Pseudomonas syringae pv. maculicola str. ES4326' vs 'sid2-1 mutant; mock' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance |
2.2 | | AT1G21250 | 'Blumeria graminis f. sp. hordei A6; virulent; 18 hour' vs 'none; wild type phenotype; 18 hour' | infect, phenotype, time | Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant. |
2.2 | | AT1G21250 | 'met1 mutant' vs 'wild type' at '0 hour' | genotype, time | Transcription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours |
-2.2 | | AT1G21250 | 'lsm4 mutant' vs 'wild type' in 'Columbia ecotype' | ecotype, genotype | Transcription profiling by high throughput sequencing of Arabidopsis lsm4-1 mutants and sad1/lsm5 double mutants |
2.2 | | AT1G21250 | 'met1 mutant' vs 'wild type' at '6 hour' | genotype, time | Transcription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours |
-2.2 | | AT1G21250 | 'ald1 mutant; mock' vs 'wild type; mock' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance |
2.2 | | AT1G21250 | '3% glucose' at '4 hour' vs 'control' at '0 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid |
2.2 | | AT1G21250 | 'OsRLCK253 transgenic' vs 'wild type' | genotype | Rice A20/AN1 zinc-finger containing stress-associated proteins (SAP1/11) and a receptor-like cytoplasmic kinase (OsRLCK253) interact via A20 zinc-finger and confer abiotic stress tolerance in transgenic Arabidopsis plants |
-2.2 | | AT1G21250 | 'root; phosphate starvation 10 days' vs 'root; mock' | organism part, treatment | The response and recovery of Arabidopsis thaliana transcriptome to phosphate starvation [ATH1-121501] |
2.1 | | AT1G21250 | 'fbl17-1 (GK_170-E02)' vs 'wild type genotype' | genotype | RNAseq analysis of Arabidopsis Col-0 wild-type and fbl17 mutant seedlings |
2.1 | | AT1G21250 | 'rlk1 mutant' vs 'wild type' in 'water' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for rlk1 after treatment with chitooctaose |
2.1 | | AT1G21250 | 'camta1/2/3 mutant; grown at 22 C and treated at 4 C for 24 hours' vs 'wild type; grown at 22 C and treated at 4 C for 24 hours' | genotype, growth condition | Expression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants |
2.1 | | AT1G21250 | 'dexamethasone-induced STM overexpression' vs 'wild type' at '72 hour' | phenotype, sampling time point | Transcription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls |
-2.1 | | AT1G21250 | 'eds16 mutant; Golovinomyces orontii infection' vs 'wild type; Golovinomyces orontii infection' at 5 day | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii |
2.1 | | AT1G21250 | 'SAB' vs 'wild type genotype' | genotype | Transcription profiling by array of three Arabidopsis knockouts against wild type controls to study the influence of ubiquitin-like proteases in plant transcriptional modulation |
2.1 | | AT1G21250 | 'primisulfuron' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after treatment with primisulfuron herbicide |
2.1 | | AT1G21250 | 'Phytophthera infestans' vs 'none' at '6 hour' | infect, time | Transcription profiling by array of Arabidopsis after infection with Phytophthera infestans |
2.1 | | AT1G21250 | 'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
2.1 | | AT1G21250 | 'powdery mildew infected' vs 'uninfected' in 'syringolin; 20 micromolar' at '8 to 12 hour' | compound, growth condition, time | Transcription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A |
2.1 | | AT1G21250 | 'camta1/3 mutant; grown at 22 C' vs 'wild type; grown at 22 C' | genotype, growth condition | Expression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants |
2 | | AT1G21250 | 'mannitol; 300 millimolar' vs 'none' in 'pyl duodecuple loss of function mutant' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
2 | | AT1G21250 | '350 ppb ozone exposure for 2hr' vs 'none' in 'wrky25, wrky33 double mutant' | environmental stress, genotype | Transcription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment |
2 | | AT1G21250 | '12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
2 | | AT1G21250 | 'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
2 | | AT1G21250 | 'letm1-1 homozygous, letm2-1 heterozygous double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis wild-type seedlings and either single or double knock-out mutants of LETM1 or LETM2 |
-2 | | AT1G21250 | 'double mutant at3g03940/at518190 knockdown' vs 'wild type' | genotype | Osmotic stress induces phosphorylation of histone H3 at threonine 3 in pericentromeric regions of Arabidopsis thaliana [expression] |
2 | | AT1G21250 | 'pH 4.5' vs 'pH 6' at 8 hour | growth condition, time | Transcription profiling by array of Arabidopsis grown at low pH |
-2 | | AT1G21250 | 'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '8 hour' | phenotype, time | Transcription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response |
-2 | | AT1G21250 | '20% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature' | growth condition | Transcription profiling by array of Arabidopsis after growth at different temperatures |
2 | | AT1G21250 | '8 hour (light)' vs '0 hour (light)' | growth condition, time | Transcription profiling of diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves |
2 | | AT1G21250 | 'coi1-2 mutant' vs 'wild type genotype' in 'Sclerotinia sclerotiorum' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
2 | | AT1G21250 | 'axr3-1 mutant' vs 'wild type' in 'no compound' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid |
2 | | AT1G21250 | 'tga2;tga5;tga6 mutant; phytoprostane' vs 'Col-0; phytoprostane' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for tga2, tga5 and tga6 after treatment with phytoprostane or 12-oxo-phytodienoic acid |
2 | | AT1G21250 | 'salicylic acid' vs 'control' in 'npr1 sni1 mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for npr1, sni1, ssn2 and/or brca2a after treatment with salicylic acid |
-2 | | AT1G21250 | 'oxt6 mutant' vs 'wild type' | genotype | A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana |
2 | | AT1G21250 | 'triazolopyrimidine' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after treatment with triazolopyrimidine |
2 | | AT1G21250 | 'pft1-1; 16 degree celsius' vs 'pft1-1; 23 degree celsius' | genotype, temperature | PFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis |
2 | | AT1G21250 | 'Turnip mosaic virus' vs 'mock' in 'zone 0' | infect, sampling site | Transcription profiling by of Arabidopsis leaves after infection with Potyvirus turnip mosaic virus |
1.9 | | AT1G21250 | 'mannitol; 300 millimolar' vs 'none' in 'wild type genotype' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
1.9 | | AT1G21250 | 'salicylic acid; 0.5 millimolar' vs 'none' in 'wild type genotype' | compound, genotype | Salicylic acid-induced gene expression in wild-type Col-0 and mutant upl3-4 Arabidopsis thaliana plants. |
1.9 | | AT1G21250 | 'Te; 350 ppb ozone exposure for 2hr' vs 'Te; control' | genotype, treatment | Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana |
-1.9 | | AT1G21250 | 'atprmt5 mutant' vs 'wild type genotype' | genotype | AtPRMT5 regulates shoot regeneration through modulating multiple genes expression analyzed by RNA-seq |
-1.9 | | AT1G21250 | 'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.9 | | AT1G21250 | '3% glucose' at '2 hour' vs 'control' at '0 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid |
1.9 | | AT1G21250 | 'drought stress' vs 'none' in 'ABF3 overexpression' at '24 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress |
1.9 | | AT1G21250 | 'Piereis brassicae; eggs only' vs 'none; none' in 'mid rosette growth stage; leaf' | developmental stage, infect, organism part, stimulus | RNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive) |
1.9 | | AT1G21250 | 'det1-1 mutant' vs 'wild type' in 'continuous dark (no light) regimen' | genotype, growth condition | Transcription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours |
1.9 | | AT1G21250 | 'dexamethasone' vs 'none' in 'MKK9DD mutant; control' | compound, genotype, growth condition | Transcription profiling by array of Arabidopsis MKK9DD (constitutively active MKK9 kinase mutant) overexpressing seedlings and Pi-starved wild type seedlings to identify the same regulated genes |
1.9 | | AT1G21250 | 'light pulse in the middle of the day' vs 'day time control' | growth condition | RNA-seq of Arabidopsis seedlings with or without light pulses treatment in the middle of day or night against untreated controls to study how the light pulses control the phase of the circadian clock |
1.9 | | AT1G21250 | 'sodium chloride; 120 millimolar' vs 'control; 0 millimolar' in 'rsa1-1 mutant' at '24 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis rsa1-1 mutants under salt stress |
1.9 | | AT1G21250 | 'atsf1-2 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis wild type and atsf1-2 mutant seedlings |
1.9 | | AT1G21250 | '5-aza-2-deoxycytidine 20 milligram per liter' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ddm1 |
-1.9 | | AT1G21250 | 'water deprivation' vs 'control' in 'pKYL71-35S::InsP5-ptase (line “T8”)' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation |
-1.8 | | AT1G21250 | 'NSRa/NSRb' vs 'wild type' | genotype | Alternative RNA processing events in a double NSR mutant Arabidopsis |
1.8 | | AT1G21250 | 'Sphingomonas melonis Fr1 colonization; Pseudomonas syringae DC3000' vs 'axenic plant' at '2 day' | growth condition, infect, sampling time point | Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000 |
1.8 | | AT1G21250 | 'ANAC017 OEb' vs 'wild type genotype' at '1 day' | genotype, time | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
1.8 | | AT1G21250 | 'Blumeria graminis f.sp. hordei' vs 'none' in 'ataf1-1' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei |
1.8 | | AT1G21250 | 'tt4' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
1.8 | | AT1G21250 | 'pipecolic acid; 10 micromolar' vs 'none' in 'wild type genotype' | block, compound, genotype | Transcriptional response of Arabidopsis thaliana to exogenous application of pipecolic acid |
1.8 | | AT1G21250 | 'SIZ1' vs 'wild type genotype' | genotype | Transcription profiling by array of three Arabidopsis knockouts against wild type controls to study the influence of ubiquitin-like proteases in plant transcriptional modulation |
-1.8 | | AT1G21250 | 'GVGdvl4' vs 'control' in 'dexamethasone' | compound, genotype | Transcription profiling by array of Arabidopsis overexpressing dvl4 after treatment with dexamethasone |
1.8 | | AT1G21250 | 'srk2dei triple mutant' vs 'wild type' in 'dehydration stress' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
1.8 | | AT1G21250 | 'msh1 albino mutant' vs 'wild type' | genotype | Transcript profiling of Arabidopsis albino msh1 mutants |
1.8 | | AT1G21250 | 'OsSAP11 transgenic' vs 'wild type' | genotype | Rice A20/AN1 zinc-finger containing stress-associated proteins (SAP1/11) and a receptor-like cytoplasmic kinase (OsRLCK253) interact via A20 zinc-finger and confer abiotic stress tolerance in transgenic Arabidopsis plants |
1.8 | | AT1G21250 | 'Phytophthora infestans' vs 'none' in 'wild type' at '12 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-1.8 | | AT1G21250 | 'beta-estradiol 5 micromolar' vs 'water' at 24h | compound, time | Transcription profiling by array of Arabidopsis with RNAi-mediated knockdown of RBR after treatment with beta estradiol |
-1.8 | | AT1G21250 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; leaf' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
1.8 | | AT1G21250 | '100 micromolar; 4-chloro-6-methyl-2-phenylpyrimidine' vs 'control' at '4 hour' | compound, time | Transcription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine |
1.7 | | AT1G21250 | '12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
1.7 | | AT1G21250 | '18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-1.7 | | AT1G21250 | 'lyk4/5' vs 'wild type genotype' in 'CO8; 1 millimolar' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.7 | | AT1G21250 | 'snrk2.1/2.4/2.5/2.9/2.10 quintuple mutant' vs 'wild type genotype' in 'none' | compound, genotype | RNA-seq of Arabidopsis Col-0, snrk2.4, double snrk2.4/2.10 and quintuple snrk2.1/2.4/2.5/2.9/2.10 mutants from control (0mM) and salt stress (150mM NaCl for 1hour) treatment. |
1.7 | | AT1G21250 | 'CO8; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
-1.7 | | AT1G21250 | 'chr11-1, chr17-1 double mutant' vs 'wild type' at '8 day' | genotype, time | Transcription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture. |
-1.7 | | AT1G21250 | 'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.7 | | AT1G21250 | 'powdery mildew' vs 'none' in 'wild type genotype' | genotype, infect | Transcription profiling of Arabidopsis callose synthase deficient (pmr4-1) mutant and wild type plants infected with powdery mildew |
1.7 | | AT1G21250 | 'Sphingomonas melonis Fr1 colonization; Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day' | growth condition, infect, sampling time point | Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000 |
1.7 | | AT1G21250 | 'mbd6 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana |
1.7 | | AT1G21250 | 'auxin and brassinazole' vs 'auxin' | compound | Transcription profiling by array of Arabidopsis after treatment with auxin and brassinazole or auxin only |
1.7 | | AT1G21250 | 'trasngenic REVOLUTA fused to GR domain' vs 'wild type genotype' in 'Collection day one' at '0 minute' | block, genotype, time | Expression data from Arabidopsis GR-REVOLUTA and KANADI1-GR transgenic seedlings |
-1.7 | | AT1G21250 | 'pepr1-1 Pepr2-3; Pep2' at '10 hour' vs 'wild type; Pep2' at '10 hour' | genotype, time, treatment | Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2. |
1.7 | | AT1G21250 | 'salicylic acid' vs 'control' in 'npr1 sni1 brca2a mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for npr1, sni1, ssn2 and/or brca2a after treatment with salicylic acid |
-1.7 | | AT1G21250 | 'pepr1-1 Pepr2-3; Pep2' at '2 hour' vs 'wild type; Pep2' at '2 hour' | genotype, time, treatment | Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2. |
1.7 | | AT1G21250 | '12h' vs '4h' | organism part, time | Transcription profiling by array of Arabidopsis grown in elevated carbon dioxide levels in ambient light |
1.7 | | AT1G21250 | 'pvip1;pvip2' vs 'none' | rnai, RNA interference | Transcription profiling by array of Arabidopsis after RNAi-mediated knock-down of pvip1 and pvip2 |
1.7 | | AT1G21250 | 'clf28 mutant' vs 'wild type' in 'silique' | genotype, organism part | Transcription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants |
1.7 | | AT1G21250 | 'powdery mildew infected' vs 'uninfected' in 'none' at '8 to 12 hour' | compound, growth condition, time | Transcription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A |
-1.7 | | AT1G21250 | '2 hour; excess light' vs '0 hour; low light' in 'tnr4 mutant' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
-1.7 | | AT1G21250 | '15 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
1.7 | | AT1G21250 | 'pab2 pab8; total RNA' vs 'wild type; total RNA' | RNA, genotype | PAB/WT polysome loading and transcript levels (Arabidopsis thaliana) |
1.7 | | AT1G21250 | "rps10 RNAi; early onset of silencing (P2)" vs "none; wild type" | RNA interference, phenotype | Microarray data sets of Arabidopsis rps10 mutants with RNAi-silenced expression of mitoribosomal S10 protein |
1.7 | | AT1G21250 | 'ASL9 overexpressor' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing ASL9 |
1.7 | | AT1G21250 | 'camta1/2 mutant; grown at 22 C' vs 'wild type; grown at 22 C' | genotype, growth condition | Expression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants |
1.7 | | AT1G21250 | 'pho1 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis phosphate deficient mutant pho1 |
1.7 | | AT1G21250 | 'drought stress' vs 'none' in 'control' at '24 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress |
1.6 | | AT1G21250 | 'clf28 mutant' vs 'wild type' in 'shoot' | genotype, organism part | Transcription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants |
1.6 | | AT1G21250 | 'mechanical stimulation' at '40 minute' vs 'none' | stimulus, time | RNAseq on touch-treated Arabidopsis thaliana plants |
1.6 | | AT1G21250 | '3% mannitol' at '2 hour' vs 'control' at '0 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid |
1.6 | | AT1G21250 | '50 micromolar antimycin A' vs 'none' | treatment | Expression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue |
1.6 | | AT1G21250 | 'ga1-3 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis ga1-3 mutants, brm-1 mutants and ga1-3, brm-1 double mutants |
1.6 | | AT1G21250 | 'wild type; Pseudomonas syringae pv. tomato DC3000' vs 'wild type; none' | genotype, infect | Transcription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000 |
-1.6 | | AT1G21250 | 'cct-1' vs 'wild type' | genotype | The Arabidopsis Mediator CDK8 module genes CCT and GCT are global regulators of developmental phase transitions. |
1.6 | | AT1G21250 | 'wild type; Golovinomyces orontii infection' vs 'wild type; no infection' at 7 day | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii |
-1.6 | | AT1G21250 | 'arf2-6 mutant' vs 'wild type' in 'indole-3-acetic acid' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid |
-1.6 | | AT1G21250 | 'arf2-6 mutant' vs 'wild type' in 'indole-3-acetic acid' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for arf2 after treatment with indole-3-acetic acid |
-1.6 | | AT1G21250 | 'nudt7-1 sid2-1 eds1-2' vs 'wild type' | genotype | Transcription profiling of EDS1- and SA-dependent genes in Arabidopsis nudt7-1 |
1.5 | | AT1G21250 | 'Ler x C24 F1 hybrid' vs 'Landsberg erecta ecotype' | genotype | Transcription profiling by high throughput sequencing of Arabidopsis Ler and C24 ecotypes and their reciprocal hybrids |
1.5 | | AT1G21250 | 'ref4-3' vs 'wild type genotype' | genotype | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
-1.5 | | AT1G21250 | 'sd1-29' vs 'wild type genotype' in '3-OH-FA; 1 millimolar' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
-1.5 | | AT1G21250 | 'cdk8-1' vs 'wild type genotype' | genotype | Gene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1 |
1.5 | | AT1G21250 | 'Spt4 knock down' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis RNAi knock-down plants of SPT4-1 and SPT4-2 |
1.5 | | AT1G21250 | 'imidazolinone' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after treatment with imidazolinone |
-1.5 | | AT1G21250 | 'sodium chloride; 50 millimolar; atpao5-3 mutant' vs 'none; ; atpao5-3 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis wild type and polyamine oxidase 5 loss-of-function mutant exposed to sodium chloride |
1.5 | | AT1G21250 | '350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for coi1-16 ein2 sid2' | genotype, growth condition | RNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling |
1.5 | | AT1G21250 | 'Col-0; 350 ppb ozone exposure for 2hr' vs 'Col-0; control' | genotype, treatment | Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana |
1.5 | | AT1G21250 | '350 ppb ozone exposure for 2hr' vs 'none' in 'wrky75 mutant' | environmental stress, genotype | Transcription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment |
1.5 | | AT1G21250 | '12h' vs '4h' | organism part, time | Transcription profiling by array of Arabidopsis grown in ambient carbon dioxide and ambient light |
-1.5 | | AT1G21250 | 'eds16 mutant; Golovinomyces orontii infection' vs 'wild type; Golovinomyces orontii infection' at 7 day | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii |
1.5 | | AT1G21250 | 'bleomycin' vs 'none' | stimulus | Transcription profiling by array of Arabidopsis seedlings grown after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment to identify synergistically induced defence genes |
-1.5 | | AT1G21250 | 'ire1a/ire1b' vs 'wild type' in 'control' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ire1 after treatment with tunicamycin |
1.5 | | AT1G21250 | 'ddm1 mutant' vs 'wild type genotype' | genotype | Gene expression in Arabidopsis ddm1 mutants with high levels of Transposable Element activity |
1.5 | | AT1G21250 | '16 hour (dark)' vs '0 hour (light)' | growth condition, time | Transcription profiling of diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves |
-1.5 | | AT1G21250 | 'dexamethasone; 10 micromolar' vs 'dimethyl sulfoxide; 0.01 percent' in 'mCherry-RAX1-GR' | compound, genotype | RNA-seq of Arabidopsis 14 day-old seedlings expressing either mCherry-RAX1-GR or mCherry-GR with 4h mock vs. dexamethasone treatment |
1.5 | | AT1G21250 | 'ADEK1 calpian null' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing DEK1 calpain |
1.5 | | AT1G21250 | 'indole-3-acetic acid; 1 hour' vs 'indole-3-acetic acid; 0.5 hour' in 'C24' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
1.5 | | AT1G21250 | '2-hexenal' vs 'mock' at '1 hour' | compound, time | Transcription profiling by array of Arabidopsis rosette leaves in response to aerial E-2-hexenal, one of the green leaf volatiles |
-1.5 | | AT1G21250 | 'sodium nitroprusside' vs 'none' | compound | Expression data from Arabidopsis thaliana treated with NO donor SNP, compared to NO depletion by cPTIO |
1.5 | | AT1G21250 | 'Phytophthora infestans' vs 'none' in 'erp140 mutant' at '12 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
1.5 | | AT1G21250 | 'tor mutant' vs 'wild type' in 'none; 0 micromolar' | compound, genotype | Transcription profiling by array of Arabidopsis estradiol inducible RNAi-tor seedlings treated with glucose |
1.5 | | AT1G21250 | '4 degree celsius' vs '20 degree celsius' in 'Columbia-0' | ecotype, temperature | Transcription profiling by array of nine ecotypes of Arabidopsis before and after cold acclimation |
1.5 | | AT1G21250 | 'Phytophthora infestans' vs 'none' in 'erp2D mutant' at '12 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-1.4 | | AT1G21250 | 'ref4-3; cdk8-1' vs 'wild type genotype' | genotype | Gene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1 |
1.4 | | AT1G21250 | 'Ler/Kas-2 hybrid' vs 'Kas-2' in 'wild type genotype' | ecotype, genotype | RNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL) |
1.4 | | AT1G21250 | 'wild type; Botrytis cinerea 2100' vs 'wild type; mock' | genotype, infect | WRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation |
-1.4 | | AT1G21250 | 'clf28 mutant' vs 'wild type' in 'inflorescence' | genotype, organism part | Transcription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants |
1.4 | | AT1G21250 | 'Sphingomonas melonis Fr1 colonization' vs 'axenic plant' at '2 day' | growth condition, infect, sampling time point | Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000 |
-1.4 | | AT1G21250 | 'drought' vs 'control' in 'camta1-3 mutant; root' | genotype, growth condition, organism part | Role of CAMTA1 gene under drought stress |
1.4 | | AT1G21250 | '3-OH-FA; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.4 | | AT1G21250 | 'hypoxia' vs 'control' in 'wild type' | genotype, growth condition | Expression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions |
-1.4 | | AT1G21250 | 'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '180 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.4 | | AT1G21250 | '12 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
1.4 | | AT1G21250 | 'ANAC017 OEa' vs 'wild type genotype' at '1 day' | genotype, time | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
-1.4 | | AT1G21250 | '2 hour; excess light' vs '0 hour; low light' in 'wild type' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
1.4 | | AT1G21250 | 'trasngenic REVOLUTA fused to GR domain' vs 'wild type genotype' in 'Collection day one' at '120 minute' | block, genotype, time | Expression data from Arabidopsis GR-REVOLUTA and KANADI1-GR transgenic seedlings |
-1.4 | | AT1G21250 | 'S-nitrosocysteine; 1 millimolar' vs 'buffer' | compound | Transcription profiling by high throughput sequencing of Arabidopsis leaf samples infiltrated with S-nitrosocysteine (CysNO) |
-1.4 | | AT1G21250 | '5 micromolar gibberellin' vs 'water' at 180 minute | growth condition, time | Transcription profiling by array of Arabidopsis expressing PcGA2ox1 after treatment with gibberellin |
1.4 | | AT1G21250 | 'hst-15 mutant' vs 'wild type' in 'Col-0' | ecotype, genotype | Transcription profiling by array of Arabidopsis mutant for dcl1, dcl2, hen1, hst, hyl1, rdr1, rdr2, or rdr6 |
1.4 | | AT1G21250 | 'trasngenic REVOLUTA fused to GR domain' vs 'wild type genotype' in 'Collection day one' at '60 minute' | block, genotype, time | Expression data from Arabidopsis GR-REVOLUTA and KANADI1-GR transgenic seedlings |
1.4 | | AT1G21250 | 'anac090 loss of function mutant' vs 'wild type genotype' | genotype | Regulatory inversion in NAC networks steers the timing of age-dependent cell death in plants [RNA-Seq] |
1.4 | | AT1G21250 | 'Phytophthora infestans' vs 'none' in 'wild type' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-1.4 | | AT1G21250 | 'AtRsgA-i homozygous knockout' vs 'wild type genotype' | genotype | RNA-seq of Arabidopsis thaliana wild-type and a putative chloroplast ribosome biogenesis mutant AtRsgA homozygous knockout |
-1.4 | | AT1G21250 | 'dexamethasone; 10 micromolar' vs 'none' in 'LBD18 over-expression' | compound, genotype | Transcription profiling by array of Arabidopsis overexpressing LBD16 and LBD18 to investigate downstream genes |
-1.4 | | AT1G21250 | 'homozygous AtCesA4' vs 'heterozygous AtCesA4' | genotype | Transcription profiling by array of Arabidopsis cellulose synthase mutants |
1.4 | | AT1G21250 | 'gir1 mutant; none' vs 'wild type; none' in 'flower' | compound, genotype, organism part | Gene expression profile in root and flower of gir1 mutant |
1.4 | | AT1G21250 | 'tor mutant' vs 'wild type' in 'glucose; 15 micromolar' | compound, genotype | Transcription profiling by array of Arabidopsis estradiol inducible RNAi-tor seedlings treated with glucose |
1.4 | | AT1G21250 | 'polysomal RNA; turnip mosaic virus inoculated' vs 'polysomal RNA; mock' | RNA, infect | The effect of TuMV on translation initiation in Arabidopsis |
1.4 | | AT1G21250 | 'eds16 mutant; Golovinomyces orontii infection' vs 'eds16 mutant; no infection' at 7 day | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii |
1.4 | | AT1G21250 | 'MYB96-deficient mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing MYB96 or myb96 knock out mutants |
1.4 | | AT1G21250 | 'pif quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen' | genotype, growth condition | Transcription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours |
1.4 | | AT1G21250 | 'arf6-2, arf8-3 double mutant' vs 'wild type' at 'petal differentiation and expansion stage' | developmental stage, genotype | Transcription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant |
-1.4 | | AT1G21250 | 'low water potential stress' vs 'control' in 'wild type' | genotype, growth condition | Comparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant |
1.4 | | AT1G21250 | '35S::KLU' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis 35S::KLU shoots compared to wild type shoots |
-1.4 | | AT1G21250 | 'eds16 mutant; no infection' vs 'wild type; no infection' at 0 hour | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii |
1.4 | | AT1G21250 | 'dde2-2; Alternaria brassicicola' at '24 hours post infection' vs 'wild type; mock' at '24 hours post infection' | genotype, infect, sampling time point | Responses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection |
-1.4 | | AT1G21250 | '35S::C2' vs 'control' in 'no compound' | compound, genotype | Transcription profiling by array of Arabidopsis expressing genimivirus C2 under the control of the 35S promoter after treatment with methyl jasmonate |
1.4 | | AT1G21250 | '4 degree celsius' vs '20 degree celsius' in 'Coimbra' | ecotype, temperature | Transcription profiling by array of nine ecotypes of Arabidopsis before and after cold acclimation |
-1.3 | | AT1G21250 | 'ref8-1 mutant' vs 'wild type' | genotype | Transcription profiling by high throughput sequencing of Arabidospsis ref8-1, med5a/5b, and med5a/5b ref8-1 mutants |
1.3 | | AT1G21250 | 'bli-1 -/-; ire1b -/-' vs 'wild type genotype' | genotype | BLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana |
1.3 | | AT1G21250 | 'arr22-ox' vs 'wild type' in 't-zeatin' | genotype, growth condition | Transcription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin |
1.3 | | AT1G21250 | 'lsd1-1' vs 'wild type genotype' in 'none' | compound, genotype | RNA-seq to investigate dual role of lesion simulating disease 1 as a condition-dependent scaffold protein and transcription regulator in Arabidopsis thaliana |
1.3 | | AT1G21250 | 'srk2dei triple mutant' vs 'wild type' in 'control' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
1.3 | | AT1G21250 | 'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '180 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.3 | | AT1G21250 | '18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
1.3 | | AT1G21250 | '9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'total mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
1.3 | | AT1G21250 | 'dexamethasone-induced STM overexpression' vs 'dexamethasone-induced STM knock down by RNAi' at '72 hour' | phenotype, sampling time point | Transcription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls |
1.3 | | AT1G21250 | 'atx1-1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for atx1 |
1.3 | | AT1G21250 | 'abi4 vtc2' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for abi4 and/or vtc2 |
1.3 | | AT1G21250 | 'MYB12OX/tt4' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
1.3 | | AT1G21250 | 'vtc2' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for abi4 and/or vtc2 |
1.3 | | AT1G21250 | 'dehydration; 46T' vs 'none; 46T' | environmental stress, genotype | Transcription factor WRKY46 regulates osmotic stress responses and stomatal movement tissue specifically and independently in Arabidopsis |
-1.3 | | AT1G21250 | 'npr1-3' vs 'wild type' in '3,5-dichloroanthranilic acid' at '2 day' | compound, genotype, time | Transcription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid |
-1.3 | | AT1G21250 | 'SWP73A overexpression' vs 'wild type genotype' | genotype | Microarray analysis of gene expression level in wild type and SWP73A overexpression Arabidopsis |
1.3 | | AT1G21250 | 'sulfometuron methyl' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after treatment with sulfometuron methyl herbicide |
-1.3 | | AT1G21250 | '5 micromolar gibberellin' vs 'water' at 60 minute | growth condition, time | Transcription profiling by array of Arabidopsis expressing PcGA2ox1 after treatment with gibberellin |
-1.3 | | AT1G21250 | '24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei A6; virulent' | infect, phenotype, time | Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant. |
1.3 | | AT1G21250 | 'edr1 mutant' vs 'wild type' in 'Golovinomyces cichoracearum' at '18 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for edr1 after infection with Golovinomyces cichoracearum |
1.3 | | AT1G21250 | 'pap1-D/tt4' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
-1.3 | | AT1G21250 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'C24' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
1.3 | | AT1G21250 | 'Phytophthora infestans' vs 'none' in 'erp2D mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
1.3 | | AT1G21250 | 'arf6-2, arf8-3 double mutant' vs 'wild type' at 'flowering stage' | developmental stage, genotype | Transcription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant |
1.3 | | AT1G21250 | 'gpt2 T-DNA mutant' vs 'wild type genotype' in 'high light intensity' at '1 day' | genotype, growth condition, time | Acclimation of photosynthesis to changes in the environment results decreases oxidative stress in Arabidopsis thaliana |
-1.3 | | AT1G21250 | '0.5 hour; excess light' vs '0 hour; low light' in 'hsfa1dhsfa2hsfa3 mutant' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
1.3 | | AT1G21250 | 'ozone; 350 nanoliter' vs 'none' in 'Shahdara' | compound, ecotype | Transcriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity. |
1.3 | | AT1G21250 | 'total RNA; turnip mosaic virus inoculated' vs 'total RNA; mock' | RNA, infect | The effect of TuMV on translation initiation in Arabidopsis |
1.3 | | AT1G21250 | 'menadione sodium bisulphite; 0.2 millimolar' vs 'water' at '3 hour' | compound, time | Transcription profiling by array of Arabidopsis plants treated either with mock or menadione sodium bisulphite and sampled after 3, 6 and 24 hours |
-1.3 | | AT1G21250 | 'water deprivation' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after water deprivation |
1.3 | | AT1G21250 | '1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '0 hour' | time, treatment | Transcription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening) |
1.3 | | AT1G21250 | 'hda5 mutant' vs 'wild type' | genotype | Transcription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants |
1.3 | | AT1G21250 | 'srk2cf double knockout' vs 'wild type' in 'drought' at '4 hour' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis srk2cf mutants in a drought stress time course. |
1.3 | | AT1G21250 | 'dehydration; wild type' vs 'none; wild type' | environmental stress, genotype | Transcription factor WRKY46 regulates osmotic stress responses and stomatal movement tissue specifically and independently in Arabidopsis |
-1.2 | | AT1G21250 | 'sd1-29' vs 'wild type genotype' in '3-OH-FA; 1 millimolar' at '180 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.2 | | AT1G21250 | 'trasngenic REVOLUTA fused to GR domain' vs 'wild type genotype' in 'Collection day one' at '30 minute' | block, genotype, time | Expression data from Arabidopsis GR-REVOLUTA and KANADI1-GR transgenic seedlings |
1.2 | | AT1G21250 | 'powdery mildew' vs 'none' in 'pmr4-1' | genotype, infect | Transcription profiling of Arabidopsis callose synthase deficient (pmr4-1) mutant and wild type plants infected with powdery mildew |
1.2 | | AT1G21250 | 'Pseudomonas syringae ES4326' vs 'none' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326 |
-1.2 | | AT1G21250 | '60 minutes after cordycepin treatment' vs 'immediately after cordycepin treatment' in 'xrn3-8 mutant' | genotype, sampling time point | Transcription profiling by array of a stably RNAi-silenced nuclear 5’-3’ exonuclease XRN3 mutant line in Arabidopsis thaliana after transcriptional inhibition with cordycepin |
-1.2 | | AT1G21250 | 'arr22-ox' vs 'wild type' in 'none' | genotype, growth condition | Transcription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin |
-1.2 | | AT1G21250 | 'phosphate-lacking medium' vs 'complete medium' in 'spx1,spx2 double mutant' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
-1.2 | | AT1G21250 | 'dexamethasone; 5 micromolar' vs 'none' in 'inducible 35S:LOB-GR line' | compound, genotype | Transcriptome analysis of genes regulated by overexpression of LATERAL ORGAN BOUNDARIES (LOB) in Arabidopsis thaliana |
1.2 | | AT1G21250 | 'ambient carbon dioxide 12h' vs 'ambient carbon dioxide 4h' | growth condition, organism part, time | Transcription profiling by array of Arabidopsis grown in ambient or elevated carbon dioxide at low light levels |
1.2 | | AT1G21250 | 'CT101; 350 ppb ozone exposure for 2hr' vs 'CT101; control' | genotype, treatment | Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana |
1.2 | | AT1G21250 | 'vte2 mutant' vs 'wild type' in '3 day' | age, genotype | Transcription profiling by array of Arabidopsis mutant for vte1 or vte2 |
-1.2 | | AT1G21250 | 'sub-zero acclimation' vs 'cold acclimation' in 'Te-0' at '72 hour' | ecotype, environmental stress, time | Transcription profiling by array of three Arabidopsis accessions under acclimation to sub-zero temperature at -3 degree Celsius after cold acclimation |
1.2 | | AT1G21250 | 'mechanical stimulation' at '25 minute' vs 'none' | stimulus, time | RNAseq on touch-treated Arabidopsis thaliana plants |
1.2 | | AT1G21250 | 'Phytophthora infestans' vs 'none' in 'erp140 mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-1.2 | | AT1G21250 | '1 micromolar salicylic acid at ZT24' vs 'water at ZT24' at '0 hour' | time, treatment | Transcription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening) |
-1.2 | | AT1G21250 | 'mCherry-RAX1-GR' vs 'mCherry-GR' in 'dexamethasone; 10 micromolar' | compound, genotype | RNA-seq of Arabidopsis 14 day-old seedlings expressing either mCherry-RAX1-GR or mCherry-GR with 4h mock vs. dexamethasone treatment |
1.2 | | AT1G21250 | 'oligogalacturonide' vs 'water' at '3 hour' | compound, time | Transcription profiling by array of Arabidopsis after treatment with oligogalacturonides |
1.2 | | AT1G21250 | 'Phytophthora parasitica' vs 'none' in 'gsnor1' | genotype, infect | RNA-sequence of Arabidopsis thaliana lines gsnor1 and Col-0 post infection of Phytophthora parasitica against controls |
1.1 | | AT1G21250 | 'sfr6-2' vs 'wild type genotype' | genotype | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
-1.1 | | AT1G21250 | 'camta1-3 mutant' vs 'wild type' in 'drought; root' | genotype, growth condition, organism part | Role of CAMTA1 gene under drought stress |
1.1 | | AT1G21250 | 'anac017 T-DNA mutant' vs 'wild type genotype' at '1 day' | genotype, time | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
-1.1 | | AT1G21250 | 'sid2-1 mutant; mock' vs 'wild type; mock' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance |
1.1 | | AT1G21250 | 'dehydration stress' vs 'control' in 'srk2dei triple mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
1.1 | | AT1G21250 | 'iron deprivation' vs. 'control' at '24 hours' in 'shoot' of 'Tsu-1' ecotype | ecotype, organism part, growth condition, time | Transcription profiling by array of Arabidopsis Kas-1 and Tsu-1 grown in iron-deficient medium |
1.1 | | AT1G21250 | 'ahk2/ahk3/ahk4 triple mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis ahk mutants |
1.1 | | AT1G21250 | '3 percent glucose and 1 micromolar indole-3-acetic acid' vs 'none' | compound | Transcription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions |
1.1 | | AT1G21250 | 'tink/ibr5-6' vs 'wild type' | genotype | Transcription profiling by array of the tinkerbell (tink) mutation of Arabidopsis. |
1.1 | | AT1G21250 | 'transgenic LeB4::AtHb1' vs 'wild type' in 'control' | genotype, growth condition | Expression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions |
1.1 | | AT1G21250 | 'transgenic KANADI1 fused to GR domain' vs 'wild type genotype' in 'Collection day two' at '60 minute' | block, genotype, time | Expression data from Arabidopsis GR-REVOLUTA and KANADI1-GR transgenic seedlings |
1.1 | | AT1G21250 | 'Pseudomonas syringae pv. Maculicola with effector AvrRpt2' at '6 hour' vs 'none' | time, treatment | Expression profiling of Col-0 treated with Psm:AvrRpt2 |
1.1 | | AT1G21250 | 'C3H15 overexpressor' vs 'wild type' | genotype | Expression data from Arabidopsis C3H14/15 overexpressors, c3h14c3h15 double mutant vs wild type |
-1.1 | | AT1G21250 | 'sid2 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326 |
1.1 | | AT1G21250 | 'mechanical stimulation' at '60 minute' vs 'none' | stimulus, time | RNAseq on touch-treated Arabidopsis thaliana plants |
1.1 | | AT1G21250 | '100 micromolar; 4-chloro-6-methyl-2-phenylpyrimidine' vs 'control' at '24 hour' | compound, time | Transcription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine |
1.1 | | AT1G21250 | 'nph4-1 arf19-1 mutant' vs 'wild type' in 'no compound' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid |
-1.1 | | AT1G21250 | 'stn7-1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for psae1, psad1 or stn7, or double mutant for psae1 and stn7 or psad1 and stn7 |
1.1 | | AT1G21250 | 'AFB1 overexpression; Pseudomonas syringae pv. tomato DC3000' vs 'AFB1 overexpression; none' | genotype, infect | Transcription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000 |
1.1 | | AT1G21250 | 'Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day' | growth condition, infect, sampling time point | Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000 |
-1.1 | | AT1G21250 | '0.5 hour; excess light' vs '0 hour; low light' in 'wild type' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
1.1 | | AT1G21250 | 'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.1 | | AT1G21250 | '4 hour (light)' vs '0 hour (light)' | growth condition, time | Transcription profiling of diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves |
1.1 | | AT1G21250 | 'sodium chloride; 150 millimolar' vs 'none' in 'snrk2.4/2.10 double mutant' | compound, genotype | RNA-seq of Arabidopsis Col-0, snrk2.4, double snrk2.4/2.10 and quintuple snrk2.1/2.4/2.5/2.9/2.10 mutants from control (0mM) and salt stress (150mM NaCl for 1hour) treatment. |
-1.1 | | AT1G21250 | 'LBD38 overexpression' vs 'wild type' in 'nitrogen depletion' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for or overexpressing LBD37 and LBD38 after nitrogen deprivation |
-1.1 | | AT1G21250 | 'pad4 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326 |
1.1 | | AT1G21250 | 'NOG1 knockdown by siRNA' vs 'none' in 'wild type genotype' | RNA interference, genotype | Transcriptome profiling of knock mutant and RNAi lines for small GTPase, nucleolar GTP-binding protein 1 (NOG1) in Arabidopsis |
1.1 | | AT1G21250 | 'coi1-2 mutant' vs 'wild type genotype' in 'Sclerotinia sclerotiorum' at '24 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
-1.1 | | AT1G21250 | 'hy5' vs 'wild type' in 'control' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for cry1 or hy5 after growth in high light or blue light |
1.1 | | AT1G21250 | 'bzip17 -/- ; bzip28 -/-' vs 'wild type genotype' in 'none' | compound, genotype | mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers |
1.1 | | AT1G21250 | 'oxt6:AtCPSF30' vs 'wild type' | genotype | A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana |
1.1 | | AT1G21250 | 'dehydration; 46T' vs 'dehydration; wild type' | environmental stress, genotype | Transcription factor WRKY46 regulates osmotic stress responses and stomatal movement tissue specifically and independently in Arabidopsis |
1.1 | | AT1G21250 | 'Erysiphe orontii' vs 'none' at '120 hour' | infect, time | Transcription profiling by array of Arabidopsis after inoculation with Erysiphe orontii |
-1.1 | | AT1G21250 | 'silver(1+) nitrate, 10 micromolar; N-benzyladenine, 3 micromolar' vs 'silver(1+) nitrate, 10 micromolar' | stimulus | Ethylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway. |
-1.1 | | AT1G21250 | 'sub-zero acclimation' vs 'cold acclimation' in 'Rschew' at '24 hour' | ecotype, environmental stress, time | Transcription profiling by array of three Arabidopsis accessions under acclimation to sub-zero temperature at -3 degree Celsius after cold acclimation |
1.1 | | AT1G21250 | 'iaa17-6 mutant' vs 'wild type' in 'no compound' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid |
1.1 | | AT1G21250 | 'nhx5-2/nhx6-2 knock outs' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis AtNHX5 and AtNHX6 single and double knock out mutants |
-1.1 | | AT1G21250 | 'gct-2' vs 'wild type' | genotype | The Arabidopsis Mediator CDK8 module genes CCT and GCT are global regulators of developmental phase transitions. |
1 | | AT1G21250 | 'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'mannitol; 300 millimolar' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
1 | | AT1G21250 | '24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-1 | | AT1G21250 | 'warm/hot temperature regimen' vs 'none' in '35S:HSFA1b-RFP' | environmental stress, genotype | Genome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq] |
1 | | AT1G21250 | 'water; des1' vs 'water; wild type' | compound, genotype | Exogenous Sulfide Reverses the Alteration of Transcriptional Profiling of the des1-1 Mutant (Arabidopsis thaliana) |
1 | | AT1G21250 | 'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1 | | AT1G21250 | 'Blumeria graminis f.sp. hordei' vs 'none' in 'wild type' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei |
1 | | AT1G21250 | '350 ppb ozone exposure for 2hr' vs 'none' in 'wild type' | environmental stress, genotype | Transcription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment |
-1 | | AT1G21250 | 'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '2 hour' | phenotype, time | Transcription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response |
1 | | AT1G21250 | 'estrogen induction' vs 'none' at '48 hour post induction' at 'age 7 day' | age, time, treatment | Transcription profiling by array of Arabidopsis seedlings after estrogen-mediated induction of FAMA |
1 | | AT1G21250 | '350 ppb ozone exposure for 2hr' vs 'control' in 'tga2 tga5 tga6' | genotype, growth condition | RNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling |
1 | | AT1G21250 | 'estradiol; 2 micromolar' vs 'DMSO' at '24 hour' | compound, time | Transcription profiling by array of Arabidopsis expressing DUO1 as a result of induction with estradiol |
1 | | AT1G21250 | '3% mannitol' at '4 hour' vs 'control' at '0 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid |
1 | | AT1G21250 | 'KO line' vs 'wild type' in 'Col-0' | ecotype, genotype | Transcription profiling by array of Arabidopsis mutant for At2g19270 |
-1 | | AT1G21250 | '35S::amiPPD' vs 'wild type genotype' | genotype | Transcription profiling by array of first leaft pair of amiPPD mutant and wild type Arabidopsis plants |
-1 | | AT1G21250 | 'pif4pif5 double mutant; high red/far-red light ratio' vs 'wild type; high red/far-red light ratio' | genotype, treatment | Phytochrome Interacting Factor 4 and 5 regulate different set of genes in high and low red/far-red light |
1 | | AT1G21250 | '350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for tga2 tga5 tga6' | genotype, growth condition | RNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling |
1 | | AT1G21250 | 'dexamethasone; CHLD reduction' vs 'dexamethasone; control' | compound, phenotype | Expression data from Arabidopsis thaliana seedlings with altered enzymes activity of the tetrapyrrole biosynthesis pathway |
-1 | | AT1G21250 | 'Pseudomonas syringae DC3000 COR-deltahrpS strain' vs 'mock' in 'wild type' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains |
1 | | AT1G21250 | 'letm1-1 heterozygous, letm2-1 homozygous double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis wild-type seedlings and either single or double knock-out mutants of LETM1 or LETM2 |
1 | | AT1G21250 | 'hog1-7 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis polyploidy-associated transcriptional gene silencing (paTGS) mutants ddm1-12 and hog1-7 against wild type controls |
1 | | AT1G21250 | 'WOX1-2' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
-1 | | AT1G21250 | 'Pseudomonas syringae DC3000::avrRpm1' vs 'control' in '4 hour' | age, growth condition | Transcription profiling by array of Arabidopsis after inoculation with Pseudomonas syringae |
1 | | AT1G21250 | 'hyl1; atxr5; atxr6 triple loss of function mutant' vs 'wild type genotype' | genotype | Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq] |
-1 | | AT1G21250 | 'arf2-6 mutant' vs 'wild type' in 'no compound' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid |
-1 | | AT1G21250 | 'tunicamycin; 5 microgram per milliliter' vs 'none' in 'bzip17 -/- ; bzip28 -/-' | compound, genotype | mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers |
-1 | | AT1G21250 | 'brm-1 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis ga1-3 mutants, brm-1 mutants and ga1-3, brm-1 double mutants |
1 | | AT1G21250 | 'camta1-3 mutant' vs 'wild type' in 'control; leaf' | genotype, growth condition, organism part | Role of CAMTA1 gene under drought stress |
1 | | AT1G21250 | 'seu-3 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for seuss and/or aintegumenta |
1 | | AT1G21250 | 'seu-3 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for ant1 and seu3 |