AT1G61120 (GES)

arabidopsis thaliana

(E,E)-geranyllinalool synthase

Filter your results

Arabidopsis thaliana
Organism part
Showing 41 experiments:
image/svg+xml leaf root flower fruit
Created with Highcharts 6.2.0adult vascular leafcarpelcauline leafcotyledonflowerflower pedicelfruitfruit septumfruit valvehypocotylleafmixed shoot apical meristem, cotyledon and first leavespetalpetioleplant calluspollenrootroot tiprosette leafseedsepalsiliquestamenstem internodestem node
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
4 Liu et al
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
T
Mergner et al., 2020 - Organism part - …
P
Proteomics
T
Transcriptomics
High
Medium
Low
Below cutoff
No data available

Filter your results

Kingdom
Species
Experiment type
Experimental variables
Regulation
Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
2.2572 × 10-5810.9
AT1G61120'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
5.0955 × 10-5210.8
AT1G61120'Piereis brassicae; larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
8.3806 × 10-639.1
AT1G61120'S-nitrosocysteine; 1 millimolar' vs 'buffer'compoundTranscription profiling by high throughput sequencing of Arabidopsis leaf samples infiltrated with S-nitrosocysteine (CysNO)
Adjusted p-valueLog2-fold change
3.087 × 10-109.1
AT1G61120''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 10 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
4.7089 × 10-8-8.6
AT1G61120'coi1 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
4.1801 × 10-68.1
AT1G61120'rhd6 WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
3.5679 × 10-437.8
AT1G61120'ozone; 350 nanoliter' vs 'none' in 'Cvi-0'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
1.1392 × 10-5-7.6
AT1G61120'24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei K1; avirulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
2.3037 × 10-77.5
AT1G61120'Pseudomonas syringae ES4326' vs 'none' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
6.5378 × 10-857.2
AT1G61120'mannitol; 300 millimolar' vs 'none' in 'pyl duodecuple loss of function mutant'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
3.6567 × 10-66.9
AT1G61120'locally damaged by leafminer' vs 'control'growth conditionTranscription profiling by array of Arabidopsis leaves with localised or systemic damage by leafminer Liriomyza huidobrensis
Adjusted p-valueLog2-fold change
6.3991 × 10-266.7
AT1G61120'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'whole plant flowering stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
2.1201 × 10-56.4
AT1G61120'tcx2; TMO5:3xGFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
7.5783 × 10-5-6.4
AT1G61120'37 degrees celsius' vs '20 degrees celsius'compound, temperatureTranscription profiling by array of Arabidopsis after heat shock or treatment with tunicamycin or L-azetidine-2-carboxylic acid
Adjusted p-valueLog2-fold change
3.7293 × 10-316.2
AT1G61120'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.3757 × 10-456.1
AT1G61120'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
9.4695 × 10-456.1
AT1G61120'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.9591 × 10-3-6
GES'dja6; dja5 double mutant' vs 'wild type genotype'genotypeRNA-seq of WT and dja6 dja5 mutant in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.212 × 10-205.9
AT1G61120'Piereis brassicae; larval feeding' vs 'none; none' in 'whole plant flowering stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
1.2488 × 10-95.8
AT1G61120''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 6 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
4.1165 × 10-8-5.8
AT1G61120'35S:LSD1-GFP' vs 'dexamethasone; 30 micromolar; 35S:LSD1-GR'compound, genotypeRNA-seq to investigate dual role of lesion simulating disease 1 as a condition-dependent scaffold protein and transcription regulator in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.2859 × 10-555.6
AT1G61120'Te; 350 ppb ozone exposure for 2hr' vs 'Te; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.3093 × 10-95.6
AT1G61120"leaf 8 wounded" vs "unwounded"growth conditionTranscription profiling by array of Arabidopsis leaves either under electric current injection or with distal wound against untreated controls
Adjusted p-valueLog2-fold change
2.7397 × 10-4-5.6
AT1G61120'mbs1-1 mutant' vs 'fluorescent (flu) mutant' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response
Adjusted p-valueLog2-fold change
2.5052 × 10-305.5
AT1G61120'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
2.7331 × 10-155.5
AT1G61120'Col-0; 350 ppb ozone exposure for 2hr' vs 'Col-0; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.7331 × 10-155.5
AT1G61120'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for coi1-16 ein2 sid2'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
1.127 × 10-13-5.3
AT1G61120'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.7528 × 10-65.3
AT1G61120'Pseudomonas syringae pv. tomato' vs 'none' in 'ulp1c/ulp1d double mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
2.0569 × 10-25.3
AT1G61120'Botrytis cinerea' vs 'none' at '48 hour'infect, timeTranscription profiling by array of Arabidopsis after infection with Botrytis cinerea
Adjusted p-valueLog2-fold change
4.1827 × 10-215.2
AT1G61120'elf18; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
6.2453 × 10-4-5.2
AT1G61120'RNAi-MBS2/mbs1-1 knockdown' vs 'fluorescent (flu) mutant' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response
Adjusted p-valueLog2-fold change
2.1666 × 10-555.1
AT1G61120'mannitol; 300 millimolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
2.9864 × 10-4-5.1
AT1G61120'18 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei K1; avirulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.8977 × 10-75
AT1G61120'pao-1 mutant' vs 'wild type genotype' in 'continuous dark (no light) regimen' at '2 day'environmental stress, genotype, timeTranscriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway
Adjusted p-valueLog2-fold change
3.6135 × 10-5-5
AT1G61120'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
2.589 × 10-264.9
AT1G61120'nlp20; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
5.251 × 10-26-4.9
AT1G61120'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
4.6285 × 10-114.9
AT1G61120'Piereis brassicae; eggs only' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
4.088 × 10-4-4.9
AT1G61120'35S:MBS1 overexpression' vs 'fluorescent (flu) mutant' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response
Adjusted p-valueLog2-fold change
6.9593 × 10-54.8
AT1G61120'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
1.8225 × 10-4-4.8
AT1G61120'phr1 mutant' vs 'wild type genotype' in 'phosphate deprivation; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
1.7495 × 10-34.8
AT1G61120'ein2-1; Alternaria brassicicola' at '24 hours post infection' vs 'wild type; mock' at '24 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
8.5101 × 10-384.7
AT1G61120'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
1.4377 × 10-414.6
AT1G61120'350 ppb ozone exposure for 2hr' vs 'none' in 'wild type'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
1.9124 × 10-164.6
AT1G61120'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.9861 × 10-114.6
AT1G61120'wild type; Pseudomonas syringae pv. maculicola str. ES4326' vs 'wild type; mock'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance
Adjusted p-valueLog2-fold change
4.6261 × 10-44.5
AT1G61120'ozone 500 parts per billion' vs 'control'growth conditionFunctional Genomics of Ozone Stress in Arabidopsis.
Adjusted p-valueLog2-fold change
4.6261 × 10-44.5
AT1G61120'ozone 500 parts per billion' vs 'control'growth conditionArabidopsis thaliana response to ozone
Adjusted p-valueLog2-fold change
5.2496 × 10-44.5
AT1G61120'fls1-3 mutant' vs 'wild type'genotypeExpression data from Arabidopsis leaves
Adjusted p-valueLog2-fold change
9.0023 × 10-54.4
AT1G61120'MgCl2' vs 'none' in 'ulp1c/ulp1d double mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
4.0038 × 10-24.4
AT1G61120'COBL9::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
8.1326 × 10-94.3
AT1G61120'CT101; 350 ppb ozone exposure for 2hr' vs 'CT101; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.1276 × 10-54.3
AT1G61120'wox5-1 mutant' vs 'wild type genotype' in 'wox5 GFP positive'genotype, phenotypeFrom gene networks to network motif dynamics: how the presense of positive feed-back and -forward loops between PERIANTHIA, WUSCHEL-RELATED HOMEOBOX5 and GRF-INTERACTING FACTOR 1 modulates gene expression and function in the Arabidopsis roots.
Adjusted p-valueLog2-fold change
3.2737 × 10-44.3
AT1G61120"40 microampere of electric current for 10 second" vs "no electric current injection"growth conditionTranscription profiling by array of Arabidopsis leaves either under electric current injection or with distal wound against untreated controls
Adjusted p-valueLog2-fold change
4.7875 × 10-44.3
AT1G61120'phosphate deprivation' vs 'control' in 'wild type genotype; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
6.9587 × 10-44.3
AT1G61120'HrpZ 10uM' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
3.8243 × 10-404.2
AT1G61120'350 ppb ozone exposure for 2hr' vs 'control' in 'tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
2.4168 × 10-11-4.2
AT1G61120'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
4.1256 × 10-13-4.1
AT1G61120'Sei-0 x Col F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
5.7557 × 10-4-4.1
AT1G61120'coi1-2 mutant' vs 'wild type genotype' in 'Sclerotinia sclerotiorum' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
6.5746 × 10-54
AT1G61120'GST-NPP1 1uM' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
8.7944 × 10-10-3.9
AT1G61120'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
1.7853 × 10-9-3.8
AT1G61120'TaRZ1 overexpressing line' vs 'wild type'genotypeGene expression profile in wheat TaRZ1-expressing Arabidopsis plant
Adjusted p-valueLog2-fold change
3.9474 × 10-123.7
AT1G61120'OGs; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.6602 × 10-43.7
AT1G61120'dehydration stress' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
8.7981 × 10-33.7
AT1G61120'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '24 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
2.7668 × 10-24-3.6
AT1G61120'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
5.8035 × 10-15-3.6
AT1G61120'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.3243 × 10-7-3.6
AT1G61120'exposed to 10 degree Celsius; gemin2 mutant; 24 hour' vs 'control; gemin2 mutant'environmental stress, genotype, timeGenome-wide analysis of wild type and gemin2 mutant plants [cold exposure]
Adjusted p-valueLog2-fold change
4.3604 × 10-53.6
AT1G61120'low water potential stress' vs 'control' in 'wild type'genotype, growth conditionComparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant
Adjusted p-valueLog2-fold change
5.3616 × 10-33.6
AT1G61120'ga1-3 gai-t6 rga-t2 rgl1-1 rgl2-1' vs 'wild type' in 'Alternaria brassicicola' at '72 hour'genotype, time, treatmentTranscription profiling by array of Arabidopsis DELLA mutants after treatment with flg22, methyl jasmonate, Alternaria brassicicola or Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
7.3009 × 10-5-3.5
AT1G61120'iron; 100 micromolar' vs 'none' in 'bhlh100/101 double mutant; shoot'compound, genotype, organism partExpression data from Arabidopsis roots and shoots grown with or without iron
Adjusted p-valueLog2-fold change
1.1149 × 10-33.5
AT1G61120'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky75 mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
7.7766 × 10-103.4
AT1G61120'nlp20; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
5.5425 × 10-73.4
AT1G61120'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
4.0095 × 10-53.4
AT1G61120'antimycin A; 50 micromolar' vs 'water' in 'rao1-2 mutant'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
7.7464 × 10-53.4
AT1G61120'Phytophthora infestans' vs 'none' in 'erp2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
1.3003 × 10-23.4
AT1G61120'systemically damaged by leafminer' vs 'control'growth conditionTranscription profiling by array of Arabidopsis leaves with localised or systemic damage by leafminer Liriomyza huidobrensis
Adjusted p-valueLog2-fold change
3.1299 × 10-2-3.4
AT1G61120'coi1-2 mutant' vs 'wild type genotype' in 'Sclerotinia sclerotiorum' at '24 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
2.8777 × 10-83.3
AT1G61120'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
2.4131 × 10-73.3
AT1G61120'cycloheximide (60 micromolar) and dexamethasone (60 micromolar)' vs 'dimethyl sulfoxide; 60 micromolar'compoundTranscription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes
Adjusted p-valueLog2-fold change
5.5953 × 10-7-3.3
AT1G61120'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '24 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
3.1726 × 10-43.3
AT1G61120'lsd1-1' vs 'wild type genotype' in 'none'compound, genotypeRNA-seq to investigate dual role of lesion simulating disease 1 as a condition-dependent scaffold protein and transcription regulator in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.9894 × 10-153.2
AT1G61120'sulki1-8 mutant' vs 'wild type genotype' in 'Ler/Kas-2 hybrid'ecotype, genotypeRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Adjusted p-valueLog2-fold change
3.4494 × 10-12-3.2
AT1G61120'Trichoplusia ni feeding' vs 'control' in 'none'environmental stress, infectTranscription profiling of Arabidopsis thaliana leaves as reaction to caterpillar (Trichoplusia ni) feeding and fungi (Laccaria bicolor) infection of the roots
Adjusted p-valueLog2-fold change
2.372 × 10-63.2
AT1G61120'lsm4 mutant' vs 'wild type' in 'Columbia ecotype'ecotype, genotypeTranscription profiling by high throughput sequencing of Arabidopsis lsm4-1 mutants and sad1/lsm5 double mutants
Adjusted p-valueLog2-fold change
2.6591 × 10-43.2
AT1G61120'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
3.5762 × 10-43.2
AT1G61120'Flg-22 1uM' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
1.098 × 10-33.2
AT1G61120'TaFLS overexpression line 2 (OE2)' vs 'wild type'genotypeExpression data from Arabidopsis leaves
Adjusted p-valueLog2-fold change
1.7858 × 10-33.2
AT1G61120'methyl jasmonate' vs 'mock' in 'jaz7-1D'compound, genotypeExpression profiling of wild-type Arabidopsis and an activation-tagged jaz7-1D line.
Adjusted p-valueLog2-fold change
1.6001 × 10-11-3.1
AT1G61120'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.1041 × 10-93.1
AT1G61120'bzip17 -/- ; bzip28 -/-' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
7.6194 × 10-73.1
AT1G61120'wild type; Botrytis cinerea 2100' vs 'wild type; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
2.0181 × 10-33.1
AT1G61120'bhlh100/101 double mutant' vs 'wild type' in 'none; shoot'compound, genotype, organism partExpression data from Arabidopsis roots and shoots grown with or without iron
Adjusted p-valueLog2-fold change
2.0558 × 10-33.1
AT1G61120'osmotic stress (3h with 0.3 molar mannitol)' vs 'control' in 'leaf'growth condition, organism partTranscriptome Profiling of Roots and leaves Under High Osmotic Stress in Arabidopsis
Adjusted p-valueLog2-fold change
1.2292 × 10-2-3.1
AT1G61120'2 hour; excess light' vs '0 hour; low light' in 'hsfa1dhsfa2hsfa3 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
6.8633 × 10-113
AT1G61120'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.0904 × 10-83
AT1G61120'swi3d mutant' vs 'wild type genotype'genotypeTranscript profiling of Arabidopsis thaliana swi3d mutant with inactivated SWI3D subunit of SWI/SNF complex
Adjusted p-valueLog2-fold change
1.4119 × 10-5-3
AT1G61120'Ler/Kas-2 hybrid' vs 'Kas-2' in 'wild type genotype'ecotype, genotypeRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Adjusted p-valueLog2-fold change
5.4452 × 10-53
AT1G61120'antimycin A; 50 micromolar' vs 'water' in 'rao1-1 mutant'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
2.0488 × 10-43
AT1G61120'cycloheximide' vs 'dimethyl sulfoxide' in '60 micromolar'compoundTranscription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes
Adjusted p-valueLog2-fold change
2.1284 × 10-43
AT1G61120'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky25, wrky33 double mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
1.2937 × 10-33
AT1G61120'wild type; Pseudomonas syringae pv. tomato DC3000' vs 'wild type; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
1.6437 × 10-33
AT1G61120'powdery mildew infected' vs 'uninfected' in 'syringolin; 20 micromolar' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
1.5914 × 10-132.9
AT1G61120'hyl1; atxr5; atxr6 triple loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
3.1565 × 10-12-2.9
AT1G61120'atprmt5 mutant' vs 'wild type genotype'genotypeAtPRMT5 regulates shoot regeneration through modulating multiple genes expression analyzed by RNA-seq
Adjusted p-valueLog2-fold change
1.1352 × 10-8-2.9
AT1G61120'pepr1-1 Pepr2-3; Pep2' at '2 hour' vs 'wild type; Pep2' at '2 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
5.2384 × 10-82.9
AT1G61120'arid2-/-; arid3-/-; arid4-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
9.9966 × 10-42.9
AT1G61120'AFB1 overexpression; Pseudomonas syringae pv. tomato DC3000' vs 'AFB1 overexpression; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
3.5436 × 10-22.9
AT1G61120'erf104 knockout; flg22' vs 'erf104 knockout; none'compound, genotypeTranscription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6
Adjusted p-valueLog2-fold change
6.7887 × 10-82.8
AT1G61120'50 micromolar abscisic acid' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
4.8426 × 10-7-2.8
AT1G61120'srk2dei triple mutant' vs 'wild type' in '50 micromolar abscisic acid'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
1.7191 × 10-5-2.8
AT1G61120'pBeaconRFP_GR::bZIP1; Treated with cycloheximide, 10 uM dexamethasone in ethanol, 20 mM KCl' vs 'empty vector; Treated with cycloheximide, ethanol, 20 mM KCl'genotype, treatmentHit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis
Adjusted p-valueLog2-fold change
1.2541 × 10-32.8
AT1G61120'antimycin A; 50 micromolar' vs 'water' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
2.6734 × 10-32.8
AT1G61120'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.329 × 10-112.7
AT1G61120'Pseudomonas syringae DC3000 COR-avrPphB strain' vs 'mock' in 'upf1-5 mutant'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
6.9177 × 10-92.7
AT1G61120'swp73b-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis swp73b-1 mutant
Adjusted p-valueLog2-fold change
1.6876 × 10-52.7
AT1G61120'low phosphate' vs 'control' in 'none; wild type'compound, genotype, growth conditionTranscription profiling by array of Arabidopsis MKK9DD (constitutively active MKK9 kinase mutant) overexpressing seedlings and Pi-starved wild type seedlings to identify the same regulated genes
Adjusted p-valueLog2-fold change
1.559 × 10-4-2.7
AT1G61120'pBeaconRFP_GR::bZIP1; Treated with cycloheximide, ethanol, 20 mM KCl' vs 'empty vector; Treated with cycloheximide, ethanol, 20 mM KCl'genotype, treatmentHit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis
Adjusted p-valueLog2-fold change
2.5293 × 10-22.7
AT1G61120'Pseudomonas syringae DC3000' vs 'control' in '12 hour'age, growth conditionTranscription profiling by array of Arabidopsis after inoculation with Pseudomonas syringae
Adjusted p-valueLog2-fold change
3.0812 × 10-15-2.6
AT1G61120'ref4-3; cdk8-1' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1
Adjusted p-valueLog2-fold change
9.7957 × 10-10-2.6
AT1G61120'excess light; none; 2 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
1.9477 × 10-72.6
AT1G61120'C24; 350 ppb ozone exposure for 2hr' vs 'C24; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.124 × 10-7-2.6
AT1G61120'rlt1-1 rlt2-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis rlt1-1 rlt2-1 mutants
Adjusted p-valueLog2-fold change
2.2873 × 10-52.6
AT1G61120'cycloheximide' vs 'control'treatmentTranscription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts
Adjusted p-valueLog2-fold change
1.0246 × 10-62.5
AT1G61120'Pseudomonas syringae DC3000 COR-avrPphB strain' vs 'mock' in 'wild type'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
1.5689 × 10-42.5
AT1G61120'methyl jasmonate' vs 'mock' in 'wild type'compound, genotypeExpression profiling of wild-type Arabidopsis and an activation-tagged jaz7-1D line.
Adjusted p-valueLog2-fold change
1.4614 × 10-62.4
AT1G61120'ozone; 350 nanoliter' vs 'none' in 'Shahdara'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
1.0674 × 10-42.4
AT1G61120'Blumeria graminis f.sp. hordei' vs 'none' in 'wild type'genotype, infectTranscription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei
Adjusted p-valueLog2-fold change
7.2251 × 10-4-2.4
AT1G61120'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
4.1702 × 10-22.4
AT1G61120'GO overexpression' vs 'wild type' in 'transferred to ambient CO2 concentration' at '8 hour'genotype, growth condition, timeTranscription profiling by array of Arabidopsis catalase mutant and plants expressing glycolate oxidase in chloroplasts transferred to ambient CO2 concentration
Adjusted p-valueLog2-fold change
9.0121 × 10-132.3
AT1G61120'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.1095 × 10-5-2.3
AT1G61120'pBeaconRFP_GR::bZIP1; Treated with cycloheximide, 10 uM dexamethasone in ethanol, 20 mM KNO3 and 20 mM NH4NO3 solution' vs 'empty vector; Treated with cycloheximide, ethanol, 20 mM KNO3 and 20 mM NH4NO3 solution'genotype, treatmentHit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis
Adjusted p-valueLog2-fold change
1.0267 × 10-3-2.3
AT1G61120'ASL9 overexpressor' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing ASL9
Adjusted p-valueLog2-fold change
1.1357 × 10-32.3
AT1G61120'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
3.6669 × 10-39-2.2
AT1G61120'Sei-0 x Col-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '2 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
3.6169 × 10-102.2
AT1G61120'bli-1 -/-; ire1b -/-' vs 'wild type genotype'genotypeBLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.8602 × 10-82.2
AT1G61120'bli-1 -/-' vs 'wild type genotype'genotypeBLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.7274 × 10-42.2
AT1G61120'dexamethasone and cycloheximide' vs 'control'treatmentTranscription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts
Adjusted p-valueLog2-fold change
3.0586 × 10-42.2
AT1G61120'powdery mildew infected' vs 'uninfected' in 'none' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
4.0973 × 10-42.2
AT1G61120'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
1.3607 × 10-32.2
AT1G61120'sulfometuron methyl' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after treatment with sulfometuron methyl herbicide
Adjusted p-valueLog2-fold change
2.9833 × 10-32.2
AT1G61120"rps10 RNAi; late onset of silencing (P3)" vs "none; wild type"RNA interference, phenotypeMicroarray data sets of Arabidopsis rps10 mutants with RNAi-silenced expression of mitoribosomal S10 protein
Adjusted p-valueLog2-fold change
4.5872 × 10-22.2
AT1G61120'21 hour' vs '12 hour' in 'Pseudomonas syringae pv. tomato DC3000'infect, timeTranscription profiling by array of Arabidopsis after infection with different strains of Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
3.6213 × 10-52.1
AT1G61120'dehydration stress' vs 'control' in 'srk2dei triple mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
5.6191 × 10-5-2.1
AT1G61120'Trichoplusia ni feeding' vs 'control' in 'Laccaria bicolor'environmental stress, infectTranscription profiling of Arabidopsis thaliana leaves as reaction to caterpillar (Trichoplusia ni) feeding and fungi (Laccaria bicolor) infection of the roots
Adjusted p-valueLog2-fold change
4.1742 × 10-4-2.1
AT1G61120'pBeaconRFP_GR::bZIP1; Treated with cycloheximide, ethanol, 20 mM KNO3 and 20 mM NH4NO3 solution' vs 'empty vector; Treated with cycloheximide, ethanol, 20 mM KNO3 and 20 mM NH4NO3 solution'genotype, treatmentHit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis
Adjusted p-valueLog2-fold change
1.3515 × 10-3-2.1
AT1G61120'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'none'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
1.6314 × 10-32.1
AT1G61120'Pseudomonas syringae pv tomato DC3000(avrRpt2)' vs 'none' in 'gh3.5-1D heterozygous mutant'genotype, infectTranscription profiling by array of Arabidopsis heterozygous mutant for gh3.5 after inoculation with Pseudomonas syringae pv tomato DC3000(avrRpt2) against wild type counterparts and uninfected controls
Adjusted p-valueLog2-fold change
3.3373 × 10-32.1
AT1G61120'antimycin A; 50 micromolar; wild type' vs 'water; wild type'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
4.501 × 10-32.1
AT1G61120'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 gpa1-4 double mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
1.4067 × 10-22.1
AT1G61120'mechanical stimulus - water from spray bottle; 25 minute' vs 'none; 0 minute' in 'wild type genotype'genotype, stimulus, timeRNAseq analysis of early touch responses in myc234 mutants in Arabidopsis
Adjusted p-valueLog2-fold change
3.5793 × 10-22.1
AT1G61120'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
8.8702 × 10-52
AT1G61120'mechanical stimulation' at '25 minute' vs 'none'stimulus, timeRNAseq on touch-treated Arabidopsis thaliana plants
Adjusted p-valueLog2-fold change
1.652 × 10-42
AT1G61120'warm/hot temperature regimen' vs 'none' in 'wild type genotype'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
6.847 × 10-42
AT1G61120'drought stress' vs 'none' in 'ABF3 overexpression' at '24 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress
Adjusted p-valueLog2-fold change
1.3688 × 10-3-2
AT1G61120'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.4984 × 10-32
AT1G61120'dexamethasone; 15 micromolar' vs 'none'compoundRNA-seq to investigate Auxin responsive genes in the Arabidopsis stem
Adjusted p-valueLog2-fold change
4.9736 × 10-3-2
AT1G61120'salt and heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
2.171 × 10-22
AT1G61120'Blumeria graminis f.sp. hordei' vs 'none' in 'ataf1-1'genotype, infectTranscription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei
Adjusted p-valueLog2-fold change
5.7191 × 10-61.9
AT1G61120'mechanical stimulation' at '40 minute' vs 'none'stimulus, timeRNAseq on touch-treated Arabidopsis thaliana plants
Adjusted p-valueLog2-fold change
5.6926 × 10-51.9
AT1G61120'drought stress' vs 'none' in 'ABF3 overexpression' at '2 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress
Adjusted p-valueLog2-fold change
8.8542 × 10-41.9
AT1G61120'epcr1-/-; epcr2-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
9.1113 × 10-41.9
AT1G61120'clf28 mutant' vs 'wild type' in 'silique'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
1.2217 × 10-31.9
AT1G61120'homozygous AtCesA4' vs 'heterozygous AtCesA4'genotypeTranscription profiling by array of Arabidopsis cellulose synthase mutants
Adjusted p-valueLog2-fold change
2.359 × 10-31.9
AT1G61120'edr1 mutant' vs 'wild type' in 'Golovinomyces cichoracearum' at '36 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for edr1 after infection with Golovinomyces cichoracearum
Adjusted p-valueLog2-fold change
4.5788 × 10-21.9
AT1G61120'drought stress' vs 'none' in 'control' at '24 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress
Adjusted p-valueLog2-fold change
1.4898 × 10-71.8
AT1G61120'Bla-1 x Hh-0' vs 'Bla-1'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
2.5525 × 10-5-1.8
AT1G61120'ein2-1; Pep2' at '2 hour' vs 'wild type; Pep2' at '2 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
1.7177 × 10-31.8
AT1G61120'pnp1-1' vs 'wild type' in 'full nutrient medium' at '168 hour'genotype, growth condition, timeTranscription profiling by array of Arabidopsis mutant for pnp after phosphate deprivation
Adjusted p-valueLog2-fold change
4.2999 × 10-21.8
AT1G61120'ANAC017 OEb' vs 'wild type genotype' at '0 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
4.8052 × 10-21.8
AT1G61120'Columbia-0; alx8' vs 'Columbia-0; wild type'ecotype, genotypeTranscription profiling of Arabidopsis wild type and SAL1 mutant plants grown under normal conditions
Adjusted p-valueLog2-fold change
2.0649 × 10-81.7
AT1G61120'Mir-0 x Se-0' vs 'Mir-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
7.6227 × 10-51.7
AT1G61120'cycloheximide' vs 'mock'treatmentTranscription profiling of Arabidopsis WUSCHEL targets
Adjusted p-valueLog2-fold change
2.3924 × 10-41.7
AT1G61120'clf28 mutant' vs 'wild type' in 'shoot'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
3.827 × 10-4-1.7
AT1G61120'dexamethasone' vs 'mock'treatmentTranscription profiling of Arabidopsis WUSCHEL targets
Adjusted p-valueLog2-fold change
7.4647 × 10-41.7
AT1G61120'Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day'growth condition, infect, sampling time pointLeaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
Adjusted p-valueLog2-fold change
2.2535 × 10-3-1.7
AT1G61120'Sei-0 x Col-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
1.6506 × 10-21.7
AT1G61120'elf18; 1 millimolar' vs 'none' in 'wild type genotype' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.8102 × 10-21.7
AT1G61120'flg22' vs 'none' in 'wild type'genotype, treatmentTranscription profiling by array of Arabidopsis expressing miR393 or AFB1 under the control of the 35S promoter after treatment with auxin and/or flg22
Adjusted p-valueLog2-fold change
2.0118 × 10-21.7
AT1G61120'oas-a1.1' vs 'wild type' in 'CdCl2-treated shoot' at '24 hour'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis mutant for oas-a1 after treatment with cadmium chloride
Adjusted p-valueLog2-fold change
2.1225 × 10-2-1.7
AT1G61120'AtPep1' vs 'none'stimulusRNA-seq of Arabidopsis thaliana seedlings treated with Flg22 or Pep1
Adjusted p-valueLog2-fold change
4.6105 × 10-21.7
AT1G61120'wrky18, wrky40 double mutant' vs 'wild type' in 'none; 0 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis thaliana WRKY18/40 double knock out infected with Golovinomyces orontii
Adjusted p-valueLog2-fold change
1.0447 × 10-71.6
AT1G61120'Mir-0 x Se-0' vs 'Se-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
2.0057 × 10-41.6
AT1G61120'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.2025 × 10-41.6
AT1G61120'tga2;tga5;tga6 mutant; 12-oxo-phytodienoic acid' vs 'Col-0; 12-oxo-phytodienoic acid'compound, genotypeTranscription profiling by array of Arabidopsis mutant for tga2, tga5 and tga6 after treatment with phytoprostane or 12-oxo-phytodienoic acid
Adjusted p-valueLog2-fold change
3.0016 × 10-4-1.6
AT1G61120'safener' vs 'none' in 'sid2-2 mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2 or tga2, tga3, tga5 and tga6 after treatment with mefenpyr and isoxadifen
Adjusted p-valueLog2-fold change
9.619 × 10-4-1.6
AT1G61120'chitin' vs 'none' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin
Adjusted p-valueLog2-fold change
1.9281 × 10-31.6
AT1G61120'scrm-D' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings
Adjusted p-valueLog2-fold change
2.3258 × 10-31.6
AT1G61120'Golovinomyces orontii; 8 hour' vs 'none; 0 hour' in 'wild type'genotype, infect, timeTranscription profiling by array of Arabidopsis thaliana WRKY18/40 double knock out infected with Golovinomyces orontii
Adjusted p-valueLog2-fold change
2.3811 × 10-3-1.6
AT1G61120'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '2 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.812 × 10-31.6
AT1G61120'elf18; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
8.2277 × 10-31.6
AT1G61120'jasmonic acid; high red/far-red ratio' vs 'mock; high red/far-red ratio'compound, treatmentExpression data from low Red:Far-Red ratio and Jasmonic Acid crosstalk in Arabidopsis
Adjusted p-valueLog2-fold change
1.0566 × 10-2-1.6
AT1G61120'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.7553 × 10-21.6
AT1G61120'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-3'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
3.325 × 10-2-1.6
AT1G61120'srk2dei triple mutant' vs 'wild type' in 'dehydration stress'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
4.9158 × 10-21.6
AT1G61120'wrky33 mutant; Botrytis cinerea 2100' vs 'wrky33 mutant; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
3.3049 × 10-111.5
AT1G61120'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.596 × 10-41.5
AT1G61120'hypoxia' vs 'control' in 'transgenic LeB4::AtHb1'genotype, growth conditionExpression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions
Adjusted p-valueLog2-fold change
4.448 × 10-4-1.5
AT1G61120'2 hour; excess light' vs '0 hour; low light' in 'wild type'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
4.875 × 10-21.5
AT1G61120'mpk6 knockout; flg22' vs 'mpk6 knockout; none'compound, genotypeTranscription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6
Adjusted p-valueLog2-fold change
1.5497 × 10-341.4
AT1G61120'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'mannitol; 300 millimolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
7.3371 × 10-61.4
AT1G61120'Bla-1 x Hh-0' vs 'Hh-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
2.75 × 10-41.4
AT1G61120'Plectosphaerella cucumerina inoculation' vs 'control' in 'agb1-1 mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina
Adjusted p-valueLog2-fold change
5.858 × 10-4-1.4
AT1G61120'oxt6:AtCPSF30' vs 'wild type'genotypeA polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.4503 × 10-21.4
AT1G61120'dexamethasone-induced STM overexpression' vs 'dexamethasone-induced STM knock down by RNAi' at '216 hour'phenotype, sampling time pointTranscription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
Adjusted p-valueLog2-fold change
1.5251 × 10-21.4
AT1G61120'5-aza-2-deoxycytidine 20 milligram per liter' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ddm1
Adjusted p-valueLog2-fold change
1.6848 × 10-21.4
AT1G61120'1-naphthylacetic acid and flg22' vs 'none' in 'wild type'genotype, treatmentTranscription profiling by array of Arabidopsis expressing miR393 or AFB1 under the control of the 35S promoter after treatment with auxin and/or flg22
Adjusted p-valueLog2-fold change
2.1996 × 10-21.4
AT1G61120'wounding' at '1 hour' vs 'none' at '0 hour'injury, timeTranscriptional response to wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
3.1196 × 10-21.4
AT1G61120'Myzus persicae saliva' vs 'control'treatmentArabidopsis thaliana gene expression changes upon treatment with green peach aphid saliva
Adjusted p-valueLog2-fold change
4.3698 × 10-2-1.4
AT1G61120'ein2 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
1.2244 × 10-61.3
AT1G61120'vtc1' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for vtc1 or abi4
Adjusted p-valueLog2-fold change
2.7833 × 10-41.3
AT1G61120'transgenic LeB4::AtHb1' vs 'wild type' in 'hypoxia'genotype, growth conditionExpression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions
Adjusted p-valueLog2-fold change
5.2545 × 10-41.3
AT1G61120'Pseudomonas syringae pv. tomato expressing HopZ1a:C216A' vs 'MgCl2' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
1.0563 × 10-3-1.3
AT1G61120'lithium chloride, 100 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
1.2671 × 10-31.3
AT1G61120'35S:HSFA1b-RFP' vs 'wild type genotype' in 'none'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
2.7709 × 10-3-1.3
AT1G61120'arf6-2, arf8-3 double mutant' vs 'wild type' at 'petal differentiation and expansion stage'developmental stage, genotypeTranscription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant
Adjusted p-valueLog2-fold change
1.7112 × 10-21.3
AT1G61120'flg22' vs 'none' in '35S::miR393'genotype, treatmentTranscription profiling by array of Arabidopsis expressing miR393 or AFB1 under the control of the 35S promoter after treatment with auxin and/or flg22
Adjusted p-valueLog2-fold change
1.7264 × 10-2-1.3
AT1G61120'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.5152 × 10-21.3
AT1G61120'ESTAIG1' vs 'wild type genotype' at '0 minute'genotype, timeIdentification of mRNAs Regulated in Response to Transcriptional Activation of the Arabidopsis Abscisic Acid Insensitive Growth 1 (AIG1) Transcription Factor cDNA
Adjusted p-valueLog2-fold change
3.8226 × 10-2-1.3
AT1G61120'pBeaconRFP_GR::bZIP1; Treated with cycloheximide, 10 uM dexamethasone in ethanol, 20 mM KNO3 and 20 mM NH4NO3 solution' vs 'empty vector; Treated with cycloheximide, 10 uM dexamethasone in ethanol, 20 mM KNO3 and 20 mM NH4NO3 solution'genotype, treatmentHit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis
Adjusted p-valueLog2-fold change
3.9277 × 10-21.3
AT1G61120'flg22' vs 'none' in '35S::AFB1'genotype, treatmentTranscription profiling by array of Arabidopsis expressing miR393 or AFB1 under the control of the 35S promoter after treatment with auxin and/or flg22
Adjusted p-valueLog2-fold change
4.9414 × 10-21.3
AT1G61120'C3H15 overexpressor' vs 'wild type'genotypeExpression data from Arabidopsis C3H14/15 overexpressors, c3h14c3h15 double mutant vs wild type
Adjusted p-valueLog2-fold change
1.9267 × 10-6-1.2
AT1G61120'cdk8-1' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1
Adjusted p-valueLog2-fold change
3.426 × 10-41.2
AT1G61120'csn4-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
7.6474 × 10-4-1.2
AT1G61120'tunicamycin; 5 microgram per milliliter' vs 'none' in 'ire1b mutant'compound, genotypeExploring the link between ER stress and autophagy in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.5967 × 10-3-1.2
AT1G61120'safener' vs 'none' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2 or tga2, tga3, tga5 and tga6 after treatment with mefenpyr and isoxadifen
Adjusted p-valueLog2-fold change
3.8551 × 10-3-1.2
AT1G61120'PAP, 100 micromolar; lithium chloride, 100 millimolar; ATP, 1 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
4.4467 × 10-31.2
AT1G61120'agb1-1 mutant' vs 'wild type' in 'Plectosphaerella cucumerina inoculation'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina
Adjusted p-valueLog2-fold change
4.936 × 10-3-1.2
AT1G61120'xrn3-8 mutant' vs 'wild type genotype' in 'total RNA depleted for ribosomal RNA'fraction, genotype, protocolDirect RNA Sequencing of polyadenylated RNA & high-depth Illumina strand-specific, short read RNA-seq of a stably RNAi-silenced nuclear 5'-3' exonuclease XRN3 mutant line in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.9607 × 10-3-1.2
AT1G61120'camta1/2/3 mutant; grown at 22 C' vs 'wild type; grown at 22 C'genotype, growth conditionExpression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants
Adjusted p-valueLog2-fold change
6.7933 × 10-3-1.2
AT1G61120'camta2/3 mutant; grown at 22 C' vs 'wild type; grown at 22 C'genotype, growth conditionExpression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants
Adjusted p-valueLog2-fold change
8.3906 × 10-31.2
AT1G61120'drought stress' vs 'none' in 'control' at '2 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress
Adjusted p-valueLog2-fold change
1.0604 × 10-2-1.2
AT1G61120'sd1-29' vs 'wild type genotype' in '3-OH-FA; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.5714 × 10-21.2
AT1G61120'Pseudomonas syringae DC3000 COR-deltahrpS strain' vs 'mock' in 'upf1-5 mutant'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
2.5557 × 10-21.2
AT1G61120'clf28 mutant' vs 'wild type' in 'root'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
2.6768 × 10-2-1.2
AT1G61120'camta1/2/3 mutant; grown at 22 C and treated at 4 C for 24 hours' vs 'wild type; grown at 22 C and treated at 4 C for 24 hours'genotype, growth conditionExpression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants
Adjusted p-valueLog2-fold change
3.7578 × 10-21.2
AT1G61120'mbd11 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.334 × 10-41.1
AT1G61120'lug-3 mutant' vs 'wild type' in 'flower'genotype, organism partTranscription profiling by array of Arabidopsis lug-3 mutant plants
Adjusted p-valueLog2-fold change
5.3564 × 10-4-1.1
AT1G61120'cs26 mutant' vs 'wild type' in 'short day photoperiod'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods
Adjusted p-valueLog2-fold change
7.0259 × 10-41.1
AT1G61120'spx1,spx2 double mutant' vs 'wild type' in 'complete medium'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
1.3188 × 10-3-1.1
AT1G61120'arf6-2, arf8-3 double mutant' vs 'wild type' at 'flowering stage'developmental stage, genotypeTranscription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant
Adjusted p-valueLog2-fold change
2.9818 × 10-31.1
AT1G61120'Pseudomonas syringae pv. tomato expressing HopZ1a' vs 'MgCl2' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
4.6532 × 10-31.1
AT1G61120'ref4-3' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
Adjusted p-valueLog2-fold change
9.3708 × 10-31.1
AT1G61120'Pseudomonas syringae pv. tomato' vs 'MgCl2' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
1.111 × 10-2-1.1
AT1G61120'0.5 hour; excess light' vs '0 hour; low light' in 'wild type'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
1.3122 × 10-2-1.1
AT1G61120'arp6-1' vs 'wild type genotype'genotypeArabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition. [RNA-Seq]
Adjusted p-valueLog2-fold change
1.5549 × 10-21.1
AT1G61120'bzip17 -/- ; bzip28 -/-' vs 'wild type genotype' in 'none'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
3.3833 × 10-21.1
AT1G61120'dexamethasone-induced STM overexpression' vs 'wild type' at '216 hour'phenotype, sampling time pointTranscription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
Adjusted p-valueLog2-fold change
3.53 × 10-21.1
AT1G61120'Phytophthera infestans' vs 'none' at '12 hour'infect, timeTranscription profiling by array of Arabidopsis after infection with Phytophthera infestans
Adjusted p-valueLog2-fold change
4.4247 × 10-21.1
AT1G61120'edr1 mutant' vs 'wild type' in 'Golovinomyces cichoracearum' at '18 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for edr1 after infection with Golovinomyces cichoracearum
Adjusted p-valueLog2-fold change
1.6713 × 10-34-1
AT1G61120'frg1/2 mutant' vs 'wild type genotype'genotypeRNA-seq of coding RNA in frg1-2 mutant and wild-type strains of Arabidopsis
Adjusted p-valueLog2-fold change
3.7897 × 10-51
AT1G61120'hst-15 mutant' vs 'wild type' in 'Col-0'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for dcl1, dcl2, hen1, hst, hyl1, rdr1, rdr2, or rdr6
Adjusted p-valueLog2-fold change
3.8098 × 10-51
AT1G61120'oligomycin' vs 'control' at '4 hour'growth condition, timeEffect of oligomycin on transcript levels in Arabidopsis seedling cultures
Adjusted p-valueLog2-fold change
1.0509 × 10-31
AT1G61120'KZ-10 x Mrk-0' vs 'Mrk-0'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
4.3045 × 10-3-1
AT1G61120'pad4 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
1.264 × 10-2-1
AT1G61120'beta-estradiol; CHLM overexpression' vs 'beta-estradiol; control'compound, phenotypeExpression data from Arabidopsis thaliana seedlings with altered enzymes activity of the tetrapyrrole biosynthesis pathway
Adjusted p-valueLog2-fold change
1.825 × 10-21
AT1G61120'polysomal RNA; turnip mosaic virus inoculated' vs 'polysomal RNA; mock'RNA, infectThe effect of TuMV on translation initiation in Arabidopsis
Adjusted p-valueLog2-fold change
1.8307 × 10-21
AT1G61120'Rhizoctonia solani AG2-1' vs 'mock'infectExpression data in whole Arabidopsis seedlings after treatment with Rhizoctonia solani AG8 and AG2-1
Adjusted p-valueLog2-fold change
3.7855 × 10-2-1
AT1G61120'Col-0 x Sei-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000