AT1G62760 (PMEI10)

arabidopsis thaliana

Pectinesterase inhibitor 10

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Arabidopsis thaliana
Organism part
Showing 41 experiments:
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Created with Highcharts 6.2.0adult vascular leafcarpelcauline leafcotyledonflowerflower pedicelfruitfruit septumfruit valvehypocotylleafmixed shoot apical meristem, cotyledon and first leavespetalpetioleplant calluspollenrootroot tiprosette leafseedsepalsiliquestamenstem internodestem node
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Regulation
Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
2.5842 × 10-66.1
PMEI10'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
4.4873 × 10-135.7
PMEI10'57 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
6.2111 × 10-35.6
PMEI10'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
8.5819 × 10-35.4
PMEI10'Botrytis cinerea' vs 'none' at '48 hour'infect, timeTranscription profiling by array of Arabidopsis after infection with Botrytis cinerea
Adjusted p-valueLog2-fold change
7.2249 × 10-284.8
PMEI10'42 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
3.4772 × 10-194.6
PMEI10'pao-1 mutant' vs 'wild type genotype' in 'continuous dark (no light) regimen' at '2 day'environmental stress, genotype, timeTranscriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway
Adjusted p-valueLog2-fold change
6.4031 × 10-74.5
PMEI10'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '24 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
3.925 × 10-114.3
PMEI10'ANAC017 OEb' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
5.9622 × 10-5-4.2
PMEI10'coi1-2 mutant' vs 'wild type genotype' in 'Sclerotinia sclerotiorum' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
4.7697 × 10-73.9
PMEI10'Bla-1 x Hh-0' vs 'Hh-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
4.8393 × 10-33.9
PMEI10'ga1-3 gai-t6 rga-t2 rgl1-1 rgl2-1' vs 'wild type' in 'Alternaria brassicicola' at '72 hour'genotype, time, treatmentTranscription profiling by array of Arabidopsis DELLA mutants after treatment with flg22, methyl jasmonate, Alternaria brassicicola or Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
1.7425 × 10-83.8
PMEI10'ANAC017 OEa' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
7.7409 × 10-53.8
PMEI10'Pseudomonas syringae ES4326' vs 'none' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
9.1671 × 10-5-3.8
PMEI10'coi1-2 mutant' vs 'wild type genotype' in 'Sclerotinia sclerotiorum' at '24 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
1.091 × 10-38-3.7
PMEI10'Sei-0 x Col F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
7.3544 × 10-33.7
PMEI10'tcx2; WOX5:GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
4.8052 × 10-4-3.6
PMEI10'coi1 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
2.194 × 10-59-3.5
PMEI10'Sei-0 x Col-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
6.0545 × 10-93.5
PMEI10'auxin' vs 'none' in '35 day'age, growth conditionTranscription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin
Adjusted p-valueLog2-fold change
2.1633 × 10-83.5
PMEI10'Bla-1 x Hh-0' vs 'Bla-1'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
1.007 × 10-93.4
PMEI10''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 10 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
4.7241 × 10-73.3
PMEI10'0.5 hour; excess light' vs '0 hour; low light' in 'wild type'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
7.2717 × 10-3-3.3
PMEI10'ein2 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
2.8727 × 10-153.2
PMEI10'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
2.8424 × 10-5-3.2
PMEI10'ASL9 overexpressor' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing ASL9
Adjusted p-valueLog2-fold change
8.4713 × 10-5-3.2
PMEI10'rps2 mutant' vs 'wild type genotype' in 'Pseudomonas syringae pv. maculicola carrying AvrRpt2' at '10 hour'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
4.4904 × 10-93.1
PMEI10'Mir-0 x Se-0' vs 'Mir-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
4.3158 × 10-63
PMEI10'2 hour; excess light' vs '0 hour; low light' in 'wild type'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
8.8162 × 10-5-3
PMEI10'Agrobacterium tumefaciens C58' vs 'none'infectTranscription profiling by array of Arabidopsis after infection with Agrobacterium tumefaciens and tumour development
Adjusted p-valueLog2-fold change
4.6435 × 10-7-2.9
PMEI10'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
4.3112 × 10-6-2.9
PMEI10'csn3-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
2.2717 × 10-8-2.8
PMEI10'3% glucose; 0.1% epibrassinolide' vs 'none'growth conditionGenome wide analysis of glucose brassinosteroid interaction in Arabidopsis
Adjusted p-valueLog2-fold change
5.005 × 10-62.8
PMEI10'warm/hot temperature regimen' vs 'none' in 'wild type genotype'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
6.9249 × 10-5-2.8
PMEI10'2 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
1.2018 × 10-42.8
PMEI10'Pseudomonas syringae pv tomato DC3000(avrRpt2)' vs 'none' in 'gh3.5-1D heterozygous mutant'genotype, infectTranscription profiling by array of Arabidopsis heterozygous mutant for gh3.5 after inoculation with Pseudomonas syringae pv tomato DC3000(avrRpt2) against wild type counterparts and uninfected controls
Adjusted p-valueLog2-fold change
2.2785 × 10-82.7
PMEI10'Mir-0 x Se-0' vs 'Se-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
2.7477 × 10-8-2.6
PMEI10'3 percent glucose and 1 micromolar indole-3-acetic acid' vs 'none'compoundTranscription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions
Adjusted p-valueLog2-fold change
3.2191 × 10-62.6
PMEI10'KZ-10 x Mrk-0' vs 'Mrk-0'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
8.2337 × 10-6-2.6
PMEI10'csn4-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
3.5571 × 10-3-2.6
PMEI10'AGL15 overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for agl15 and agl18 or overexpressing AGL15 during somatic embryogenesis
Adjusted p-valueLog2-fold change
9.1523 × 10-62.5
PMEI10'wild type; Botrytis cinerea 2100' vs 'wild type; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
1.6607 × 10-4-2.5
PMEI10'L17 phyA' line' vs 'wild type'genotypeExpression data from 10-days old dark grown Arabidopsis seedlings of wild type (Col-0), sps1 line and L17 line.
Adjusted p-valueLog2-fold change
6.3205 × 10-62.4
PMEI10'KZ-10 x Mrk-0' vs 'KZ-10'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
7.4229 × 10-4-2.4
PMEI10'Sei-0 x Col-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.9322 × 10-33-2.3
PMEI10'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'none'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
5.2497 × 10-72.3
PMEI10'ahk2/ahk3/ahk4 triple mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis ahk mutants
Adjusted p-valueLog2-fold change
1.652 × 10-62.3
PMEI10'4.5 micromolar Naphtalenacetic acid' vs 'none'treatmentExpression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue
Adjusted p-valueLog2-fold change
2.8691 × 10-5-2.3
PMEI10'light pulse in the middle of the day' vs 'day time control'growth conditionRNA-seq of Arabidopsis seedlings with or without light pulses treatment in the middle of day or night against untreated controls to study how the light pulses control the phase of the circadian clock
Adjusted p-valueLog2-fold change
7.2993 × 10-5-2.3
PMEI10'steady-state RNA; 4 hour; white light' vs'steady-state RNA; dark'RNA, time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with white light
Adjusted p-valueLog2-fold change
6.0428 × 10-42.3
PMEI10'mkk1;mkk2 knockout; none' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
5.3382 × 10-34-2.2
PMEI10'trichostatin; 1 micromolar' vs 'none' in 'wild type genotype'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
5.5665 × 10-82.2
PMEI10'wounding' at '1 hour' vs 'none' at '0 hour'injury, timeTranscriptional response to wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
9.5507 × 10-82.2
PMEI10'mannitol; 300 millimolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.2317 × 10-7-2.2
PMEI10'3 percent glucose' vs 'none'compoundTranscription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions
Adjusted p-valueLog2-fold change
5.9097 × 10-62.2
PMEI10'2 hour; excess light' vs '0 hour; low light' in 'hsfa1dhsfa2hsfa3 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
8.0763 × 10-62.2
PMEI10'Sclerotinia sclerotiorum' vs 'none' in 'coi1-2 mutant' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
1.1428 × 10-4-2.2
PMEI10'polysome-bound RNA; 4 hour; white light' vs'polysome-bound RNA; dark'RNA, time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with white light
Adjusted p-valueLog2-fold change
1.1606 × 10-2-2.2
PMEI10'pad4 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
1.0089 × 10-52.1
PMEI10'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
4.3461 × 10-52.1
PMEI10'gtl1-1 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis trichome from 5th and 6th rosette leaves of gtl1-1 mutant and wild type controls
Adjusted p-valueLog2-fold change
1.919 × 10-32.1
PMEI10'0.5 hour; excess light' vs '0 hour; low light' in 'tnr4 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
1.4762 × 10-2-2.1
PMEI10'10 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
2.2862 × 10-22.1
PMEI10'37 degrees celsius' vs '20 degrees celsius'compound, temperatureTranscription profiling by array of Arabidopsis after heat shock or treatment with tunicamycin or L-azetidine-2-carboxylic acid
Adjusted p-valueLog2-fold change
2.1816 × 10-52
PMEI10'mbd6 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.038 × 10-42
PMEI10'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
4.4869 × 10-32
PMEI10'empty pRR2222 vector; dark' vs 'empty pRR2222 vector; light'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
4.1133 × 10-29-1.9
PMEI10'det1-1 mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
3.2482 × 10-23-1.9
PMEI10'pif quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
7.6314 × 10-91.9
PMEI10'excess light; none; 2 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
5.2413 × 10-8-1.9
PMEI10'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'trichostatin; 1 micromolar'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
9.8471 × 10-8-1.9
PMEI10'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
1.4576 × 10-7-1.9
PMEI10'trichostatin; 1 micromolar' vs 'none' in 'pUBI10::mCherry-GR-linker-WUS'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
3.0063 × 10-31.9
PMEI10'Col-0 x Sei-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
3.7699 × 10-31.9
PMEI10'locally damaged by leafminer' vs 'control'growth conditionTranscription profiling by array of Arabidopsis leaves with localised or systemic damage by leafminer Liriomyza huidobrensis
Adjusted p-valueLog2-fold change
3.8817 × 10-31.9
PMEI10'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
4.5963 × 10-31.9
PMEI10'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 gpa1-4 double mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
1.5937 × 10-21.9
PMEI10'sid2 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
2.4546 × 10-9-1.8
PMEI10'chr11-1, chr17-1 double mutant' vs 'wild type' at '8 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
8.0513 × 10-61.8
PMEI10'auxin' vs 'none' in '7 day'age, growth conditionTranscription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin
Adjusted p-valueLog2-fold change
7.9724 × 10-51.8
PMEI10'clf28 mutant' vs 'wild type' in 'silique'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
1.6198 × 10-41.8
PMEI10'0.5 hour; excess light' vs '0 hour; low light' in 'hsfa1dhsfa2hsfa3 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
3.1209 × 10-31.8
PMEI10'heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
5.7711 × 10-31.8
PMEI10'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
2.3044 × 10-31.7
PMEI10'wounding; 3 hour' vs 'none; 0 hour' in 'DMSO'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
3.06 × 10-3-1.7
PMEI10'chitin' vs 'none' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin
Adjusted p-valueLog2-fold change
6.7455 × 10-3-1.7
PMEI10'1 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
8.1461 × 10-3-1.7
PMEI10'35S::MIF1; dark' vs 'empty pRR2222 vector; dark'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
1.3229 × 10-21.7
PMEI10'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-3'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
1.3956 × 10-2-1.7
PMEI10'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.8428 × 10-91.6
PMEI10'arr21c overexpressing line' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing arr21c
Adjusted p-valueLog2-fold change
1.8138 × 10-5-1.6
PMEI10'clf28 mutant' vs 'wild type' in 'inflorescence'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
1.0914 × 10-4-1.6
PMEI10'tink/ibr5-6' vs 'wild type'genotypeTranscription profiling by array of the tinkerbell (tink) mutation of Arabidopsis.
Adjusted p-valueLog2-fold change
1.9211 × 10-4-1.6
PMEI10'arp6-1' vs 'wild type genotype'genotypeArabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition. [RNA-Seq]
Adjusted p-valueLog2-fold change
3.8963 × 10-4-1.6
PMEI10'lug-3 mutant' vs 'wild type' in 'flower'genotype, organism partTranscription profiling by array of Arabidopsis lug-3 mutant plants
Adjusted p-valueLog2-fold change
1.0207 × 10-31.6
PMEI10'mannitol; 300 millimolar' vs 'none' in 'pyl duodecuple loss of function mutant'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
2.8549 × 10-31.6
PMEI10'C3H15 overexpressor' vs 'wild type'genotypeExpression data from Arabidopsis C3H14/15 overexpressors, c3h14c3h15 double mutant vs wild type
Adjusted p-valueLog2-fold change
7.0466 × 10-3-1.6
PMEI10'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
8.9504 × 10-31.6
PMEI10'2 hour; excess light' vs '0 hour; low light' in 'tnr4 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
3.593 × 10-21.6
PMEI10'35 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
1.8047 × 10-91.5
PMEI10'arr22-ox' vs 'wild type' in 't-zeatin'genotype, growth conditionTranscription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin
Adjusted p-valueLog2-fold change
2.3315 × 10-81.5
PMEI10'excess light; none; 0.5 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
2.3713 × 10-6-1.5
PMEI10'bzr1-1D;bri1-116 double mutant' vs 'bri1-116 null mutant'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
1.3038 × 10-41.5
PMEI10'100 micromolar; 4-chloro-6-methyl-2-phenylpyrimidine' vs 'control' at '24 hour'compound, timeTranscription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine
Adjusted p-valueLog2-fold change
1.4536 × 10-41.5
PMEI10'ozone; 350 nanoliter' vs 'none' in 'Cvi-0'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
1.5349 × 10-41.5
PMEI10'35S:HSFA1b-RFP' vs 'wild type genotype' in 'none'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
1.6603 × 10-31.5
PMEI10'wounding; 1 hour' vs 'none; 0 hour' in 'DMSO'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
2.2339 × 10-31.5
PMEI10'wounding; 6 hour' vs 'none; 0 hour' in 'DMSO'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
2.9951 × 10-31.5
PMEI10'Phytophthora infestans' vs 'none' in 'erp2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
3.4944 × 10-31.5
PMEI10'wounding' at '3 hour' vs 'none' at '0 hour'injury, timeTranscriptional response to wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
2.1433 × 10-21.5
PMEI10'vtc2' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for abi4 and/or vtc2
Adjusted p-valueLog2-fold change
4.9047 × 10-21.5
PMEI10'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.0138 × 10-31.4
PMEI10'Col-0 x Sei-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '2 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.8042 × 10-21.4
PMEI10'sulfometuron methyl' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after treatment with sulfometuron methyl herbicide
Adjusted p-valueLog2-fold change
4.8482 × 10-2-1.4
PMEI10'hda9-1 mutant' vs 'wild type'genotypeComparison of histone deacetylase 9-1 mutant (SALK_001723) dry seed transcriptome with Col wild-type
Adjusted p-valueLog2-fold change
5.9131 × 10-43-1.3
PMEI10'hae-3 hsl2-3 mutant' vs 'wild type'genotypeTranscriptional profiling of the Arabidopsis abscission mutant hae hsl2 by RNA-Seq
Adjusted p-valueLog2-fold change
3.0336 × 10-51.3
PMEI10'lec1-1 mutant' vs 'wild type' in '8 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
1.6208 × 10-4-1.3
PMEI10'anac017 T-DNA mutant' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
2.6996 × 10-41.3
PMEI10'hmr-5 null mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis hemera null (hmr-5) and weak-allele (hmr-22) photomorphogenetic mutants against wild-type controls grown under red light
Adjusted p-valueLog2-fold change
8.3497 × 10-31.3
PMEI10'abscisic acids; 100 micromolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.5256 × 10-21.3
PMEI10'Pseudomonas syringae DC3000' vs 'control' in '12 hour'age, growth conditionTranscription profiling by array of Arabidopsis after inoculation with Pseudomonas syringae
Adjusted p-valueLog2-fold change
2.7767 × 10-21.3
PMEI10'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
4.7728 × 10-2-1.3
PMEI10'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.4806 × 10-61.2
PMEI10'4.5 micromolar Naphtalenacetic acid and 50 micromolar antimycin A' vs 'none'treatmentExpression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue
Adjusted p-valueLog2-fold change
8.1348 × 10-41.2
PMEI10'warm/hot temperature regimen' vs 'none' in '35S:HSFA1b-RFP'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
2.7632 × 10-3-1.2
PMEI10'arp6-1; mbd9-3' vs 'wild type genotype'genotypeArabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition. [RNA-Seq]
Adjusted p-valueLog2-fold change
1.0037 × 10-21.2
PMEI10'tmk1-1' vs 'wild type genotype'genotypeTMK1-mediated transcriptional auxin signaling guides differential growth in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.5855 × 10-2-1.2
PMEI10'top1a-2 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis inflorescences from TOP1a-2 mutants against wild type (Landsberg erecta) controls
Adjusted p-valueLog2-fold change
1.8811 × 10-2-1.2
PMEI10'ref4-3; cdk8-1' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1
Adjusted p-valueLog2-fold change
1.9173 × 10-21.2
PMEI10'Ler/Kas-2 hybrid' vs 'Kas-2' in 'wild type genotype'ecotype, genotypeRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Adjusted p-valueLog2-fold change
4.1623 × 10-21.2
PMEI10'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
4.6553 × 10-21.2
PMEI10'wrky33 mutant; Botrytis cinerea 2100' vs 'wrky33 mutant; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
1.3735 × 10-31.1
PMEI10'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
2.7661 × 10-31.1
PMEI10'wounding' at '12 hour' vs 'none' at '0 hour'injury, timeTranscriptional response to wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
3.9678 × 10-3-1.1
PMEI10'gct-2' vs 'wild type'genotypeThe Arabidopsis Mediator CDK8 module genes CCT and GCT are global regulators of developmental phase transitions.
Adjusted p-valueLog2-fold change
8.4846 × 10-3-1.1
PMEI10'fus3-3 mutant' vs 'wild type' in '8 day; Col-0'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
1.2204 × 10-7-1
PMEI10'NSRa/NSRb' vs 'wild type'genotypeAlternative RNA processing events in a double NSR mutant Arabidopsis
Adjusted p-valueLog2-fold change
3.667 × 10-51
PMEI10'lsm5 sad1 double mutant' vs 'wild type' in 'C24'ecotype, genotypeTranscription profiling by high throughput sequencing of Arabidopsis lsm4-1 mutants and sad1/lsm5 double mutants
Adjusted p-valueLog2-fold change
6.8271 × 10-51
PMEI10'gun4-1 mutant' vs 'wild type' in 'no compound'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for gun4 or treated with gabaculin
Adjusted p-valueLog2-fold change
3.2243 × 10-41
PMEI10'mbd4 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.5152 × 10-41
PMEI10'oxt6:AtCPSF30' vs 'wild type'genotypeA polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
8.0136 × 10-41
PMEI10'arr22-ox' vs 'wild type' in 'none'genotype, growth conditionTranscription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin
Adjusted p-valueLog2-fold change
5.0951 × 10-31
PMEI10'water deprivation' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation
Adjusted p-valueLog2-fold change
6.2326 × 10-3-1
PMEI10'phyABCDE quintuple mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, lightTranscription profiling by array of Arabidopsis mutants lacking all phytochromes in response to red light exposure
Adjusted p-valueLog2-fold change
6.8038 × 10-31
PMEI10'Plectosphaerella cucumerina inoculation' vs 'control' in 'agb1-1 mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina
Adjusted p-valueLog2-fold change
6.9086 × 10-31
PMEI10'edr1 mutant' vs 'wild type' in 'Golovinomyces cichoracearum' at '36 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for edr1 after infection with Golovinomyces cichoracearum
Adjusted p-valueLog2-fold change
2.2755 × 10-21
PMEI10'bli-1 -/-' vs 'wild type genotype'genotypeBLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.9377 × 10-21
PMEI10'35S:HSFA1b-RFP' vs 'wild type genotype' in 'warm/hot temperature regimen'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
3.0707 × 10-21
PMEI10'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '2 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
4.4085 × 10-2-1
PMEI10'1 hour of blue light exposure' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis wild type plants during the shift from dark to blue light
Adjusted p-valueLog2-fold change
4.8921 × 10-2-1
PMEI10'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant