AT1G64110

arabidopsis thaliana

p-loop containing nucleoside triphosphate hydrolases superfamily protein

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Arabidopsis thaliana
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Showing 35 experiments:
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
1.1621 × 10-1512.2
AT1G64110'15 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
6.3327 × 10-438
AT1G64110'14 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
7.7256 × 10-1267.1
AT1G64110'ref8-1 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidospsis ref8-1, med5a/5b, and med5a/5b ref8-1 mutants
Adjusted p-valueLog2-fold change
8.2231 × 10-87.1
AT1G64110'13 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
5.1051 × 10-286.7
AT1G64110'10 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
2.126 × 10-876.6
AT1G64110'ref4-3; cdk8-1' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1
Adjusted p-valueLog2-fold change
3.5936 × 10-55.9
AT1G64110'water deprivation' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation
Adjusted p-valueLog2-fold change
6.7724 × 10-75.6
AT1G64110'low water potential stress' vs 'control' in 'hai1-2 mutant'genotype, growth conditionComparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant
Adjusted p-valueLog2-fold change
1.2435 × 10-65.6
AT1G64110'low water potential stress' vs 'control' in 'wild type'genotype, growth conditionComparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant
Adjusted p-valueLog2-fold change
6.3394 × 10-155.3
AT1G64110'5 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
3.3688 × 10-65.3
AT1G64110'water deprivation' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after water deprivation
Adjusted p-valueLog2-fold change
6.2727 × 10-825.1
AT1G64110'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
1.0738 × 10-125.1
AT1G64110'7 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
2.6492 × 10-145
AT1G64110'Ler/Kas-2 hybrid' vs 'Kas-2' in 'wild type genotype'ecotype, genotypeRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Adjusted p-valueLog2-fold change
2.3862 × 10-45
AT1G64110'drought' vs 'control' in 'wild type; leaf'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
1.9398 × 10-218-4.8
AT1G64110'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'mannitol; 300 millimolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
2.8038 × 10-94.8
AT1G64110'lec1-1 mutant' vs 'wild type' in '12 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
1.6929 × 10-64.8
AT1G64110'fus3-3 mutant' vs 'wild type' in '12 day; Col-0'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
1.0065 × 10-34.8
AT1G64110'12 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
1.5905 × 10-714.7
AT1G64110'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
2.6492 × 10-34.5
AT1G64110'water deprivation' vs 'control' in 'pKYL71-35S::InsP5-ptase (line “T8”)'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation
Adjusted p-valueLog2-fold change
8.4446 × 10-84.4
AT1G64110'RBRcs mutant' vs 'wild type' in 'sucrose; 1 percent'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
1.0988 × 10-2694.3
AT1G64110'mannitol; 300 millimolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
8.5604 × 10-17-4.3
AT1G64110'sulki1-8 mutant' vs 'wild type genotype' in 'Ler/Kas-2 hybrid'ecotype, genotypeRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Adjusted p-valueLog2-fold change
7.7202 × 10-74.3
AT1G64110'fus3-3 mutant' vs 'wild type' in '8 day; Col-0'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
7.2517 × 10-114.2
AT1G64110'lec1-1 mutant' vs 'wild type' in '8 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
2.6377 × 10-24.2
AT1G64110'water deprivation' vs 'control' in 'pKYL71-35S::InsP5-ptase (line “T6”)'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation
Adjusted p-valueLog2-fold change
9.9732 × 10-13-4
AT1G64110'pif1pif3pif4pif5 (pifq) mutant' vs 'wild type' in 'seedling; darkness'developmental stage, genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for pif1, pif3, pif4 and pif5 after growth in darkness or red light
Adjusted p-valueLog2-fold change
1.0671 × 10-44
AT1G64110'Plasmodiophora brassicae' vs 'none' at '23 day'infect, timePlasmodiophora brassicae infection of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.0918 × 10-44
AT1G64110'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
5.4154 × 10-2383.9
AT1G64110'abscisic acids; 100 micromolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.9422 × 10-107-3.9
AT1G64110'pif quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
8.1115 × 10-213.9
AT1G64110'abscisic acid; 50 micromolar' vs 'mock' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
2.4414 × 10-253.8
AT1G64110'ref4-3' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1
Adjusted p-valueLog2-fold change
2.0182 × 10-6-3.7
AT1G64110'ANAC017 OEb' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
2.465 × 10-53.7
AT1G64110'abscisic acid' vs 'ethanol'compoundTranscription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea
Adjusted p-valueLog2-fold change
2.1378 × 10-93.6
AT1G64110'dicamba; 7 millimolar' vs 'none'compoundTranscription profiling by array of Arabidopsis after treatment with dicamba
Adjusted p-valueLog2-fold change
5.265 × 10-33.6
AT1G64110'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 mutant; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
2.9559 × 10-1333.5
AT1G64110'drought environment' vs 'none' in 'wild type genotype'environmental stress, genotypeTranscriptome analysis using RNA sequencing conducted for Arabidopsis thaliana Col-0 wild type and ahl10-1 mutant in response to low water potential (drought environment)
Adjusted p-valueLog2-fold change
1.0317 × 10-33.5
AT1G64110'drought' vs 'control' in 'camta1-3 mutant; leaf'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
1.451 × 10-9-3.4
AT1G64110'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.3782 × 10-83.4
AT1G64110'abi3-6 mutant' vs 'wild type' in '12 day'age, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 2]
Adjusted p-valueLog2-fold change
5.2479 × 10-83.4
AT1G64110'estradiol; 2 micromolar' vs 'DMSO' at '24 hour'compound, timeTranscription profiling by array of Arabidopsis expressing DUO1 as a result of induction with estradiol
Adjusted p-valueLog2-fold change
2.9551 × 10-63.4
AT1G64110'1 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
1.4736 × 10-33.4
AT1G64110'empty pRR2222 vector; dark' vs 'empty pRR2222 vector; light'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
1.1333 × 10-113.3
AT1G64110'gul2-1 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids
Adjusted p-valueLog2-fold change
1.3248 × 10-103.3
AT1G64110'drought' vs 'control' in 'wild type; root'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
8.1406 × 10-73.3
AT1G64110'sucrose; 1 percent' vs 'none' in 'RBRcs mutant'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
3.9213 × 10-43.3
AT1G64110'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 gpa1-4 double mutant; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
1.4628 × 10-53.2
AT1G64110'2 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
9.0762 × 10-2453.1
AT1G64110'drought environment' vs 'normal watering' in 'vtc2.5 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.0118 × 10-4-3.1
AT1G64110'atbzip16; red-light and long-day (0.5 μmole m-2 sec-1)' vs 'atbzip16; dark'genotype, lightTranscription profiling by array of Arabidopsis early seedling development
Adjusted p-valueLog2-fold change
5.8952 × 10-963
AT1G64110'clf28 mutant' vs 'wild type' in 'shoot'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
6.7994 × 10-123
AT1G64110'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-3'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
7.3323 × 10-123
AT1G64110'drought' vs 'control' in 'camta1-3 mutant; root'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
1.5772 × 10-73
AT1G64110'bzr1-1D;bri1-116 double mutant' vs 'bri1-116 null mutant'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
6.5846 × 10-43
AT1G64110'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
3.3367 × 10-22.9
AT1G64110'drought; abi1td' at '0 hour' vs 'control; abi1td' at '0 hour'environmental stress, genotype, timeTranscription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling
Adjusted p-valueLog2-fold change
2.5828 × 10-262.8
AT1G64110'arp6-1' vs 'wild type genotype'genotypeArabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition. [RNA-Seq]
Adjusted p-valueLog2-fold change
2.3033 × 10-162.8
AT1G64110'drought environment' vs 'none' in 'ahl10-1'environmental stress, genotypeTranscriptome analysis using RNA sequencing conducted for Arabidopsis thaliana Col-0 wild type and ahl10-1 mutant in response to low water potential (drought environment)
Adjusted p-valueLog2-fold change
2.8808 × 10-112.8
AT1G64110'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-4'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
1.0439 × 10-4-2.8
AT1G64110'steady-state RNA; 4 hour; white light' vs'steady-state RNA; dark'RNA, time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with white light
Adjusted p-valueLog2-fold change
3.815 × 10-4-2.8
AT1G64110'polysome-bound RNA; 4 hour; white light' vs'polysome-bound RNA; dark'RNA, time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with white light
Adjusted p-valueLog2-fold change
4.6984 × 10-82.7
AT1G64110'sodium chloride; 120 millimolar' vs 'control; 0 millimolar' in 'wild type' at '24 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis rsa1-1 mutants under salt stress
Adjusted p-valueLog2-fold change
1.9772 × 10-62.7
AT1G64110'24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei K1; avirulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.8218 × 10-5-2.7
AT1G64110'cycloheximide' vs 'control'treatmentTranscription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts
Adjusted p-valueLog2-fold change
2.5886 × 10-52.7
AT1G64110'csn4-1 mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
7.3578 × 10-42.7
AT1G64110'abscisic acid 2 micromolar' vs 'control' in 'no SNRK3.15 expression'growth condition, phenotypeTranscription profiling of DEX-inducible SNRK3.15 Arabidopsis seedlings in the presence of ABA
Adjusted p-valueLog2-fold change
4.065 × 10-22.7
AT1G64110'35S::MIF1; dark' vs '35S::MIF1; light'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
2.0822 × 10-92.6
AT1G64110'arid2-/-; arid3-/-; arid4-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
4.0717 × 10-8-2.5
AT1G64110'seed germinating in continuous light 48 h SL' vs 'seed germinating in continuous light 24 h SL'growth conditionTranscription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination
Adjusted p-valueLog2-fold change
4.5886 × 10-72.5
AT1G64110'estradiol; 2 micromolar' vs 'DMSO' at '12 hour'compound, timeTranscription profiling by array of Arabidopsis expressing DUO1 as a result of induction with estradiol
Adjusted p-valueLog2-fold change
6.1909 × 10-62.5
AT1G64110'bzr1-1D;bri1-116 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
2.9003 × 10-39-2.4
AT1G64110'det1-1 mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
2.8977 × 10-5-2.4
AT1G64110'ANAC017 OEa' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
7.4626 × 10-5-2.4
AT1G64110'dexamethasone and cycloheximide' vs 'control'treatmentTranscription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts
Adjusted p-valueLog2-fold change
2.2181 × 10-3-2.4
AT1G64110'CAP-D3 mutant line SAIL_826_B06' vs 'wild type genotype'genotypeInfluence of CAP-D3 in Arabidopsis thaliana transcription
Adjusted p-valueLog2-fold change
7.9971 × 10-482.3
AT1G64110'drought environment' vs 'normal watering' in 'wild type genotype'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.5532 × 10-32-2.3
AT1G64110'lsm4 mutant' vs 'wild type' in 'Columbia ecotype'ecotype, genotypeTranscription profiling by high throughput sequencing of Arabidopsis lsm4-1 mutants and sad1/lsm5 double mutants
Adjusted p-valueLog2-fold change
3.9916 × 10-102.3
AT1G64110'mannitol; 300 millimolar' vs 'none' in 'pyl duodecuple loss of function mutant'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
2.3343 × 10-72.3
AT1G64110'csn3-1 mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
5.8197 × 10-20-2.2
AT1G64110'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'none'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.8426 × 10-72.2
AT1G64110'3 percent glucose and 1 micromolar indole-3-acetic acid' vs 'none'compoundTranscription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions
Adjusted p-valueLog2-fold change
5.0367 × 10-4-2.2
AT1G64110'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.0896 × 10-652.1
AT1G64110'drought environment' vs 'normal watering' in 'vtc2 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
6.4474 × 10-262.1
AT1G64110'35 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
1.8211 × 10-42.1
AT1G64110'5-aza-2-deoxycytidine 20 milligram per liter' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ddm1
Adjusted p-valueLog2-fold change
2.912 × 10-4-2.1
AT1G64110'Blumeria graminis f. sp. hordei K1; avirulent; 18 hour' vs 'none; wild type phenotype; 18 hour'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.6821 × 10-3-2.1
AT1G64110'wild type; red-light and long-day (0.5 μmole m-2 sec-1)' vs 'wild type; dark'genotype, lightTranscription profiling by array of Arabidopsis early seedling development
Adjusted p-valueLog2-fold change
1.7815 × 10-32.1
AT1G64110'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
2.1878 × 10-232
AT1G64110'long Poly(A)-tail; paps1-1' vs 'long Poly(A)-tail; wild type'RNA, genotypeGenome-wide analysis of PAPS1-dependent polyadenylation identifies novel roles for functionally specialized poly(A) polymerases in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.3455 × 10-10-2
AT1G64110'pif1pif3pif4pif5 (pifq) mutant' vs 'wild type genotype'genotypeRNA-seq of coding RNA of Arabidopsis Phytochrome (phy)-Interacting bHLH Factor (PIF) mutants against wild-type controls to study target genes of PIF
Adjusted p-valueLog2-fold change
1.847 × 10-6-2
AT1G64110'35S:LSD1-GFP' vs 'dexamethasone; 30 micromolar; 35S:LSD1-GR'compound, genotypeRNA-seq to investigate dual role of lesion simulating disease 1 as a condition-dependent scaffold protein and transcription regulator in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.5415 × 10-4-2
AT1G64110'ddm1-12 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis polyploidy-associated transcriptional gene silencing (paTGS) mutants ddm1-12 and hog1-7 against wild type controls
Adjusted p-valueLog2-fold change
1.9127 × 10-22
AT1G64110'NaCl' vs 'control' in 'protophloem cells'cell type, growth conditionTranscription profiling by array of Arabidopsis root cells after treatment with NaCl
Adjusted p-valueLog2-fold change
3.1756 × 10-91.9
AT1G64110'arp6-1; mbd9-3' vs 'wild type genotype'genotypeArabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition. [RNA-Seq]
Adjusted p-valueLog2-fold change
3.0591 × 10-71.9
AT1G64110'35S::WRKY23-SRDX' vs 'wild type genotype' in 'auxin; 10 micromolar'compound, genotypeMicroarray designed to find PIN polarity regulators downstream of TIR1/AFB
Adjusted p-valueLog2-fold change
2.1703 × 10-4-1.9
AT1G64110'atprmt5 mutant' vs 'wild type genotype'genotypeAtPRMT5 regulates shoot regeneration through modulating multiple genes expression analyzed by RNA-seq
Adjusted p-valueLog2-fold change
4.8475 × 10-81.8
AT1G64110'bri1-5 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids
Adjusted p-valueLog2-fold change
1.746 × 10-7-1.8
AT1G64110'dms4 mutant' vs 'wild type' at '21 day'age, genotypeTranscription profiling of Arabidopsis dms4-1, drd1-1 and drd1-6 mutant seedlings against wild-type to identify targets of IWR1-like transcription factor
Adjusted p-valueLog2-fold change
2.5828 × 10-4-1.8
AT1G64110'jasmonate' at '22 hour' vs 'none' at '0 hour' in 'opr3 mutant'compound, genotype, timeTranscription profiling of Arabidopsis male-sterile opr3 mutant stamens treated with jasmonate or its precursor, 12-oxophytodienoic acid
Adjusted p-valueLog2-fold change
8.8281 × 10-3-1.8
AT1G64110'rrd2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis temperature-dependent later root fasciation mutants
Adjusted p-valueLog2-fold change
7.3964 × 10-91.7
AT1G64110'gul2-1 bri1-5 double mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids
Adjusted p-valueLog2-fold change
8.694 × 10-8-1.7
AT1G64110'gir1 mutant; none' vs 'wild type; none' in 'flower'compound, genotype, organism partGene expression profile in root and flower of gir1 mutant
Adjusted p-valueLog2-fold change
4.6831 × 10-7-1.7
AT1G64110'cbp80 loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
1.2535 × 10-51.7
AT1G64110'sodium chloride; 120 millimolar' vs 'control; 0 millimolar' in 'rsa1-1 mutant' at '24 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis rsa1-1 mutants under salt stress
Adjusted p-valueLog2-fold change
9.0896 × 10-5-1.7
AT1G64110'myb36-1 (pSCR::ER:GFP)' vs 'wild type (pSCR::ER:GFP)' in 'root endodermis'genotype, organism partTranscription profiling by high throughput sequencing of the endodermis of Arabidopsis myb36 mutants
Adjusted p-valueLog2-fold change
2.0324 × 10-4-1.7
AT1G64110'35S:LSD1-GFP' vs 'wild type genotype' in 'none'compound, genotypeRNA-seq to investigate dual role of lesion simulating disease 1 as a condition-dependent scaffold protein and transcription regulator in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.0514 × 10-4-1.7
AT1G64110'4 days in darkness and 18 hour in red continuous light' vs '4 days in darkness and 1 hour in red continuous light' in 'wild type'genotype, growth conditionGene expression in pif3 mutant under dark and in wt under Red 1h and Red 18h
Adjusted p-valueLog2-fold change
5.6038 × 10-41.7
AT1G64110'abscisic acid; 20 micromolar' vs 'none' in 'endosperm'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
7.0306 × 10-41.7
AT1G64110'epcr1-/-; epcr2-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
1.0537 × 10-3-1.7
AT1G64110'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.4109 × 10-3-1.7
AT1G64110'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.7501 × 10-3-1.7
AT1G64110'jasmonate' at '8 hour' vs 'none' at '0 hour' in 'opr3 mutant'compound, genotype, timeTranscription profiling of Arabidopsis male-sterile opr3 mutant stamens treated with jasmonate or its precursor, 12-oxophytodienoic acid
Adjusted p-valueLog2-fold change
1.4443 × 10-2-1.7
AT1G64110'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'whole plant flowering stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
3.911 × 10-2-1.7
AT1G64110'camta1-3 mutant' vs 'wild type' in 'drought; leaf'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
3.6242 × 10-211.6
AT1G64110'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'none' at '0 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
8.3156 × 10-161.6
AT1G64110'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'none'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
1.839 × 10-151.6
AT1G64110'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '1 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
8.3473 × 10-6-1.6
AT1G64110'met1 mutant' vs 'wild type' at '0 hour'genotype, timeTranscription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours
Adjusted p-valueLog2-fold change
4.4353 × 10-4-1.6
AT1G64110'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.8598 × 10-4-1.6
AT1G64110'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.2964 × 10-3-1.6
AT1G64110'pBeaconRFP_IAA19mll overexpressor; none' vs 'pMON999_mRFP control vector; none'compound, genotypeTranscription profiling by array of Arabidopsis overexpressing IAA7mll or IAA19mll after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
1.7802 × 10-21.6
AT1G64110'NaCl' vs 'control' in 'columella root cap cells'cell type, growth conditionTranscription profiling by array of Arabidopsis root cells after treatment with NaCl
Adjusted p-valueLog2-fold change
2.3871 × 10-2-1.6
AT1G64110'AtRsgA-i homozygous knockout' vs 'wild type genotype'genotypeRNA-seq of Arabidopsis thaliana wild-type and a putative chloroplast ribosome biogenesis mutant AtRsgA homozygous knockout
Adjusted p-valueLog2-fold change
2.5537 × 10-2-1.6
AT1G64110'heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
5.7558 × 10-13-1.5
AT1G64110'Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day'growth condition, infect, sampling time pointLeaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
Adjusted p-valueLog2-fold change
3.4919 × 10-8-1.5
AT1G64110'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
3.1015 × 10-61.5
AT1G64110'abscisic acid; 20 micromolar' vs 'none' in 'embryo'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
1.4847 × 10-5-1.5
AT1G64110'met1 mutant' vs 'wild type' at '4 hour'genotype, timeTranscription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours
Adjusted p-valueLog2-fold change
3.5808 × 10-51.5
AT1G64110'homozygous AtCesA4' vs 'heterozygous AtCesA4'genotypeTranscription profiling by array of Arabidopsis cellulose synthase mutants
Adjusted p-valueLog2-fold change
8.0962 × 10-51.5
AT1G64110'arr22-ox' vs 'wild type' in 'none'genotype, growth conditionTranscription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin
Adjusted p-valueLog2-fold change
2.411 × 10-41.5
AT1G64110'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'wild type'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
4.2955 × 10-31.5
AT1G64110'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
9.895 × 10-31.5
AT1G64110'57 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
1.3732 × 10-2-1.5
AT1G64110'hog1-7 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis polyploidy-associated transcriptional gene silencing (paTGS) mutants ddm1-12 and hog1-7 against wild type controls
Adjusted p-valueLog2-fold change
2.3664 × 10-21.5
AT1G64110'Ler x C24 F1 hybrid' vs 'Landsberg erecta ecotype'genotypeTranscription profiling by high throughput sequencing of Arabidopsis Ler and C24 ecotypes and their reciprocal hybrids
Adjusted p-valueLog2-fold change
3.6922 × 10-2-1.5
AT1G64110'Piereis brassicae; larval feeding' vs 'none; none' in 'whole plant flowering stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
7.0033 × 10-151.4
AT1G64110'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '6 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
1.435 × 10-131.4
AT1G64110'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '3 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
1.0068 × 10-71.4
AT1G64110'short Poly(A)-tail; paps1-1' vs 'short Poly(A)-tail; wild type'RNA, genotypeGenome-wide analysis of PAPS1-dependent polyadenylation identifies novel roles for functionally specialized poly(A) polymerases in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.8659 × 10-71.4
AT1G64110'42 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
4.3231 × 10-61.4
AT1G64110'auxin' vs 'none' in '7 day'age, growth conditionTranscription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin
Adjusted p-valueLog2-fold change
5.2152 × 10-5-1.4
AT1G64110'continuous white light' vs 'complete darkness' at '4 h'growth conditionTranscription profiling by array of Arabidopsis after different light treatments
Adjusted p-valueLog2-fold change
6.9464 × 10-5-1.4
AT1G64110'se-2; atxr5; atxr6 triple loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
1.6209 × 10-3-1.4
AT1G64110'pkl' vs 'wild type'genotypeTranscription profiling of Arabidopsis pickle mutants
Adjusted p-valueLog2-fold change
4.4588 × 10-3-1.4
AT1G64110'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.1771 × 10-71.3
AT1G64110'3 percent glucose' vs 'none'compoundTranscription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions
Adjusted p-valueLog2-fold change
2.6431 × 10-5-1.3
AT1G64110'continuous red light' vs 'complete darkness' at '4 h'growth conditionTranscription profiling by array of Arabidopsis after different light treatments
Adjusted p-valueLog2-fold change
1.0507 × 10-41.3
AT1G64110'rsa1-1 mutant' vs 'wild type' in 'control; 0 millimolar' at '0 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis rsa1-1 mutants under salt stress
Adjusted p-valueLog2-fold change
1.5275 × 10-3-1.3
AT1G64110'se-2 loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
4.4876 × 10-3-1.3
AT1G64110'pkr2 pkl' vs 'wild type'genotypeTranscription profiling of Arabidopsis pickle mutants
Adjusted p-valueLog2-fold change
1.651 × 10-2-1.3
AT1G64110'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.2681 × 10-21.3
AT1G64110'auxin resistant pIAA26::IAA26-P108H-GFP transgenic' vs 'control'genotypeTranscription profiling by high throughput sequencing of Arabidopsis pIAA26::IAA26-P108H-GFP transgenic plants
Adjusted p-valueLog2-fold change
1.8306 × 10-5-1.2
AT1G64110'mbd6 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.0595 × 10-51.2
AT1G64110'spy-3 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis roots from spy-3 mutant to understand how SPY regulates root cortex proliferation
Adjusted p-valueLog2-fold change
1.6661 × 10-41.2
AT1G64110'low light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
3.968 × 10-4-1.2
AT1G64110'spx1,spx2 double mutant' vs 'wild type' in 'phosphate-lacking medium and resupplied with Pi for 4 h'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
1.0322 × 10-31.2
AT1G64110'hmr-5 null mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis hemera null (hmr-5) and weak-allele (hmr-22) photomorphogenetic mutants against wild-type controls grown under red light
Adjusted p-valueLog2-fold change
1.3014 × 10-31.2
AT1G64110'lec2-1 mutant' vs 'wild type' in '12 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
1.3805 × 10-3-1.2
AT1G64110'cycloheximide' vs 'mock'treatmentTranscription profiling of Arabidopsis WUSCHEL targets
Adjusted p-valueLog2-fold change
6.6073 × 10-31.2
AT1G64110'sodium chloride; 150 millimolar' vs 'none' in 'snrk2.1/2.4/2.5/2.9/2.10 quintuple mutant'compound, genotypeRNA-seq of Arabidopsis Col-0, snrk2.4, double snrk2.4/2.10 and quintuple snrk2.1/2.4/2.5/2.9/2.10 mutants from control (0mM) and salt stress (150mM NaCl for 1hour) treatment.
Adjusted p-valueLog2-fold change
8.4117 × 10-3-1.2
AT1G64110'pBeaconRFP_IAA7mll overexpressor; none' vs 'pMON999_mRFP control vector; none'compound, genotypeTranscription profiling by array of Arabidopsis overexpressing IAA7mll or IAA19mll after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
3.3481 × 10-21.2
AT1G64110'tcx2; FEZ:FEZ-GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
1.614 × 10-171.1
AT1G64110'atphb3 ANAC017' vs 'wild type'age, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants that are defective in mitochondrial proteins
Adjusted p-valueLog2-fold change
1.9387 × 10-131.1
AT1G64110'rpotmp anac017' vs 'wild type'age, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants that are defective in mitochondrial proteins
Adjusted p-valueLog2-fold change
2.3351 × 10-61.1
AT1G64110'trichostatin; 1 micromolar' vs 'none' in 'wild type genotype'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
4.7063 × 10-61.1
AT1G64110'Laccaria bicolor' vs 'none'infectTranscription profiling of Arabidopsis thaliana leaves as reaction to fungi (Laccaria bicolor) infection of the roots
Adjusted p-valueLog2-fold change
8.2464 × 10-6-1.1
AT1G64110'Phytophthora parasitica' vs 'none' in 'wild type genotype'genotype, infectRNA-sequence of Arabidopsis thaliana lines gsnor1 and Col-0 post infection of Phytophthora parasitica against controls
Adjusted p-valueLog2-fold change
1.0955 × 10-51.1
AT1G64110'paclobutrazol; 20 micromolar' vs 'none' in 'embryo'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
9.3641 × 10-5-1.1
AT1G64110'low phosphate' vs 'control' in 'none; wild type'compound, genotype, growth conditionTranscription profiling by array of Arabidopsis MKK9DD (constitutively active MKK9 kinase mutant) overexpressing seedlings and Pi-starved wild type seedlings to identify the same regulated genes
Adjusted p-valueLog2-fold change
1.3431 × 10-41.1
AT1G64110'low light; wild type' vs 'control; wild type'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
1.5146 × 10-41.1
AT1G64110'bli-1 -/-' vs 'wild type genotype'genotypeBLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.7216 × 10-41.1
AT1G64110'3% glucose; 0.1% epibrassinolide' vs 'none'growth conditionGenome wide analysis of glucose brassinosteroid interaction in Arabidopsis
Adjusted p-valueLog2-fold change
3.3853 × 10-4-1.1
AT1G64110'prmt5 mutant' vs 'wild type'genotypeGenome-wide analysis of the prmt5 and prmt4a;4b mutant transcriptomes
Adjusted p-valueLog2-fold change
3.9075 × 10-41.1
AT1G64110'RBRcs mutant' vs 'wild type' in 'none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
4.8594 × 10-4-1.1
AT1G64110'scarecrow mutant' vs 'wild type'genotypeTranscription profiling of Scarecrow mutant Arabidopsis root-tips of 5-day-old plants to those of wildtype reveals an evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants
Adjusted p-valueLog2-fold change
8.5076 × 10-41.1
AT1G64110'syringolin; 20 micromolar' vs 'none' in 'uninfected' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
1.1554 × 10-3-1.1
AT1G64110'dexamethasone' vs 'none' in 'MKK9DD mutant; control'compound, genotype, growth conditionTranscription profiling by array of Arabidopsis MKK9DD (constitutively active MKK9 kinase mutant) overexpressing seedlings and Pi-starved wild type seedlings to identify the same regulated genes
Adjusted p-valueLog2-fold change
1.7871 × 10-31.1
AT1G64110'35S-CalMV::Zat12 mutant' vs 'wild type' in 'hydrogen peroxide'genotype, growth conditionTranscription profiling by array of Arabidopsis over-expressing Zat12 after treatment with hydrogen peroxide
Adjusted p-valueLog2-fold change
1.8928 × 10-31.1
AT1G64110'4 degree celsius' vs '20 degree celsius' in 'Tenela'ecotype, temperatureTranscription profiling by array of nine ecotypes of Arabidopsis before and after cold acclimation
Adjusted p-valueLog2-fold change
2.5101 × 10-3-1.1
AT1G64110'cbp80; atxr5; atxr6 triple loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
3.7379 × 10-31.1
AT1G64110'abscisic acid and dimethylthiourea' vs 'ethanol'compoundTranscription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea
Adjusted p-valueLog2-fold change
4.1492 × 10-3-1.1
AT1G64110'agl15-4; agl18-1 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for agl15 and agl18 or overexpressing AGL15 during somatic embryogenesis
Adjusted p-valueLog2-fold change
4.4722 × 10-31.1
AT1G64110'clf28 mutant' vs 'wild type' in 'inflorescence'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
2.2255 × 10-21.1
AT1G64110'NaCl' vs 'control' in 'stele cells'cell type, growth conditionTranscription profiling by array of Arabidopsis root cells after treatment with NaCl
Adjusted p-valueLog2-fold change
3.0601 × 10-21.1
AT1G64110'Sei-0 x Col-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
3.2916 × 10-21.1
AT1G64110'low pH (pH 4.6)' vs 'standard pH (pH 5.7)' in 'root epidermis and lateral root cap'growth condition, organism partTranscription profiling by array of Arabidopsis root cells after growth in low pH conditions
Adjusted p-valueLog2-fold change
4.0664 × 10-2-1.1
AT1G64110'E2Fa-DPa overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing E2Fa-Dpa
Adjusted p-valueLog2-fold change
1.5578 × 10-4-1
AT1G64110'hda5 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants
Adjusted p-valueLog2-fold change
3.1121 × 10-4-1
AT1G64110'fpa-7 loss of function mutant' vs 'wild type genotype'genotypeGene expression profiling by RNA-seq of wild-type, fpa mutant, bdr1 mutant, bdr2 mutant, bdr3 mutant and bdrs triple mutant Arabidopsis thaliana seedlings
Adjusted p-valueLog2-fold change
6.1243 × 10-41
AT1G64110'4.5 micromolar Naphtalenacetic acid' vs 'none'treatmentExpression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue
Adjusted p-valueLog2-fold change
3.2409 × 10-3-1
AT1G64110'cycloheximide, dexamethasone' vs 'mock'treatmentTranscription profiling of Arabidopsis WUSCHEL targets
Adjusted p-valueLog2-fold change
5.3382 × 10-3-1
AT1G64110'480 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
7.0893 × 10-3-1
AT1G64110'pdx1.3 knockout' vs 'wild type' in 'leaf'genotype, organism partExpression data from WT Col-0 and the pdx1.3 ko mutant of Arabidopsis
Adjusted p-valueLog2-fold change
1.23 × 10-21
AT1G64110'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.4001 × 10-2-1
AT1G64110'pnp1-1' vs 'wild type' in 'full nutrient medium' at '168 hour'genotype, growth condition, timeTranscription profiling by array of Arabidopsis mutant for pnp after phosphate deprivation
Adjusted p-valueLog2-fold change
1.631 × 10-2-1
AT1G64110'hda9-1 mutant' vs 'wild type'genotypeComparison of histone deacetylase 9-1 mutant (SALK_001723) dry seed transcriptome with Col wild-type
Adjusted p-valueLog2-fold change
3.4775 × 10-21
AT1G64110'abscisic acid 2 micromolar' vs 'control' in 'SNRK3.15 expression'growth condition, phenotypeTranscription profiling of DEX-inducible SNRK3.15 Arabidopsis seedlings in the presence of ABA
Adjusted p-valueLog2-fold change
4.4288 × 10-21
AT1G64110'mCherry-RAX1-GR' vs 'mCherry-GR' in 'dexamethasone; 10 micromolar'compound, genotypeRNA-seq of Arabidopsis 14 day-old seedlings expressing either mCherry-RAX1-GR or mCherry-GR with 4h mock vs. dexamethasone treatment