7 | | AT1G78990 | 'drought environment' vs 'normal watering' in 'vtc2.5 mutant' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
6.7 | | AT1G78990 | 'drought environment' vs 'normal watering' in 'wild type genotype' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
6.2 | | AT1G78990 | 'tcx2; FEZ:FEZ-GFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
6.2 | | AT1G78990 | 'drought environment' vs 'normal watering' in 'vtc2 mutant' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
5.3 | | AT1G78990 | 'tcx2; TMO5:3xGFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
4.4 | | AT1G78990 | 'C24; fry1-1' vs 'C24; wild type' | ecotype, genotype | Transcription profiling of Arabidopsis wild type and SAL1 mutant plants grown under normal conditions |
4.3 | | AT1G78990 | 'Columbia-0; alx8' vs 'Columbia-0; wild type' | ecotype, genotype | Transcription profiling of Arabidopsis wild type and SAL1 mutant plants grown under normal conditions |
4.2 | | AT1G78990 | '5 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
3.9 | | AT1G78990 | '10 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
3.9 | | AT1G78990 | 'tcx2; CYCD6:GFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
-3.8 | | AT1G78990 | 'rhd6 WER::GFP' vs 'wild type genotype' | genotype | Diversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset |
3.7 | | AT1G78990 | 'tcx2; WOX5:GFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
-3.6 | | AT1G78990 | 'WER::GFP' vs 'wild type genotype' | genotype | Diversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset |
3.6 | | AT1G78990 | '14 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
3.5 | | AT1G78990 | '7 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
3.4 | | AT1G78990 | '15 hours' vs '12 hours' | time | CPIB Lateral Root timecourse |
-3.2 | | AT1G78990 | '350 ppb ozone exposure for 2hr' vs 'none' in 'wrky75 mutant' | environmental stress, genotype | Transcription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment |
-3.1 | | AT1G78990 | '5-aza-2-deoxycytidine 20 milligram per liter' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ddm1 |
-3 | | AT1G78990 | 'wounding' at '6 hour' vs 'none' at '0 hour' | injury, time | Transcriptional response to wounding of Arabidopsis thaliana roots |
-3 | | AT1G78990 | '12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-3 | | AT1G78990 | 'COBL9::GFP' vs 'wild type genotype' | genotype | Diversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset |
-2.9 | | AT1G78990 | '12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
2.9 | | AT1G78990 | 'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'spx1,spx2 double mutant' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
-2.9 | | AT1G78990 | 'wild type; Pseudomonas syringae pv. maculicola str. ES4326' vs 'wild type; mock' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance |
2.8 | | AT1G78990 | 'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'wild type' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
-2.7 | | AT1G78990 | 'CT101; 350 ppb ozone exposure for 2hr' vs 'CT101; control' | genotype, treatment | Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana |
-2.7 | | AT1G78990 | '350 ppb ozone exposure for 2hr' vs 'none' in 'wrky25, wrky33 double mutant' | environmental stress, genotype | Transcription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment |
-2.7 | | AT1G78990 | '350 ppb ozone exposure for 2hr' vs 'none' in 'wild type' | environmental stress, genotype | Transcription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment |
-2.7 | | AT1G78990 | '350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for tga2 tga5 tga6' | genotype, growth condition | RNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling |
2.7 | | AT1G78990 | '100 micromolar; fenclorim' vs 'control' at '24 hour' | compound, time | Transcription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine |
2.6 | | AT1G78990 | 'xrn3-8 mutant' vs 'wild type genotype' in 'total RNA depleted for ribosomal RNA' | fraction, genotype, protocol | Direct RNA Sequencing of polyadenylated RNA & high-depth Illumina strand-specific, short read RNA-seq of a stably RNAi-silenced nuclear 5'-3' exonuclease XRN3 mutant line in Arabidopsis thaliana |
2.6 | | AT1G78990 | 'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
-2.5 | | AT1G78990 | '18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
2.5 | | AT1G78990 | 'phosphate-lacking medium' vs 'complete medium' in 'wild type' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
-2.5 | | AT1G78990 | 'wild type; Botrytis cinerea 2100' vs 'wild type; mock' | genotype, infect | WRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation |
-2.5 | | AT1G78990 | '350 ppb ozone exposure for 2hr' vs 'control' in 'tga2 tga5 tga6' | genotype, growth condition | RNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling |
-2.5 | | AT1G78990 | 'ozone; 350 nanoliter' vs 'none' in 'Shahdara' | compound, ecotype | Transcriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity. |
-2.5 | | AT1G78990 | 'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf' | developmental stage, infect, organism part, stimulus | RNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive) |
-2.4 | | AT1G78990 | 'wounding; 3 hour' vs 'none; 0 hour' in 'DMSO' | compound, injury, time | The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots |
-2.4 | | AT1G78990 | 'mannitol; 300 millimolar' vs 'none' in 'pyl duodecuple loss of function mutant' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
-2.3 | | AT1G78990 | 'wounding' at '3 hour' vs 'none' at '0 hour' | injury, time | Transcriptional response to wounding of Arabidopsis thaliana roots |
-2.3 | | AT1G78990 | '18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-2.3 | | AT1G78990 | '18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
2.3 | | AT1G78990 | 'phosphate-lacking medium' vs 'complete medium' in 'spx1,spx2 double mutant' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
-2.3 | | AT1G78990 | 'protoplasting' vs 'control' | treatment | Transcription profiling by array of Arabidopsis protoplasted root cells after iron deprivation |
-2.2 | | AT1G78990 | '24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-2.1 | | AT1G78990 | 'tunicamycin; 5 microgram per milliliter' vs 'none' in 'ire1b mutant' | compound, genotype | Exploring the link between ER stress and autophagy in Arabidopsis thaliana |
2.1 | | AT1G78990 | 'ein2-1; elf18' at '10 hour' vs 'wild type; elf18' at '10 hour' | genotype, time, treatment | Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2. |
2.1 | | AT1G78990 | '10 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
2 | | AT1G78990 | 'lsm5 sad1 double mutant' vs 'wild type' in 'C24' | ecotype, genotype | Transcription profiling by high throughput sequencing of Arabidopsis lsm4-1 mutants and sad1/lsm5 double mutants |
2 | | AT1G78990 | 'ron1-1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for ron1 |
2 | | AT1G78990 | 'phosphate deprivation' vs 'control' in 'wild type genotype; root' | genotype, growth condition, organism part | Transcription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation |
-1.9 | | AT1G78990 | 'wounding; 6 hour' vs 'none; 0 hour' in 'DMSO' | compound, injury, time | The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots |
1.9 | | AT1G78990 | 'fry1-6 mutant' vs 'wild type' in 'grown on Linsmaier and Skoog media' | genotype, growth condition | Transcription profiling by high throughput sequencing of Arabidopsis fry1 and xrn single and double mutants |
-1.9 | | AT1G78990 | 'bli-1 -/-; ire1b -/-' vs 'wild type genotype' | genotype | BLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana |
-1.9 | | AT1G78990 | 'wrky33 mutant; Botrytis cinerea 2100' vs 'wrky33 mutant; mock' | genotype, infect | WRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation |
1.9 | | AT1G78990 | '12 hours' vs '9 hours' | time | CPIB Lateral Root timecourse |
-1.9 | | AT1G78990 | 'osmotic stress (3h with 0.3 molar mannitol)' vs 'control' in 'root' | growth condition, organism part | Transcriptome Profiling of Roots and leaves Under High Osmotic Stress in Arabidopsis |
-1.8 | | AT1G78990 | '24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-1.8 | | AT1G78990 | '35S::WRKY23-SRDX' vs 'wild type genotype' in 'auxin; 10 micromolar' | compound, genotype | Microarray designed to find PIN polarity regulators downstream of TIR1/AFB |
-1.8 | | AT1G78990 | 'abscisic acids; 100 micromolar' vs 'none' in 'wild type genotype' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
1.8 | | AT1G78990 | 'ga1 muant and SCL3 overexpression' vs 'ga1 mutant' | genotype | Arabidopsis thaliana roots at 7DAG; ga1, ga1 scl3 (LOF) and ga1 SCL3 OE (GOF) |
-1.8 | | AT1G78990 | 'Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day' | growth condition, infect, sampling time point | Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000 |
1.8 | | AT1G78990 | 'arsenic; 100 micromolar' vs 'none' in 'Ws-2' | compound, ecotype | Transcriptome profiling identified genes and pathways associated with arsenic toxicity and tolerance in Arabidopsis |
-1.8 | | AT1G78990 | '48 hours' vs '45 hours' | time | CPIB Lateral Root timecourse |
1.8 | | AT1G78990 | 'indole-3-butyric acid; 10 micromolar; wild type' vs 'DMSO; wild type' | compound, genotype | Expression data from Arabidopsis wild type and ibr1 ibr3 ibr10 triple mutant seedlings root tip segments treated with indole-3-butyric acid (IBA) |
-1.8 | | AT1G78990 | 'trichostatin A 2.5 milligram per liter' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ddm1 |
-1.8 | | AT1G78990 | 'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'whole plant flowering stage; leaf' | developmental stage, infect, organism part, stimulus | RNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive) |
-1.7 | | AT1G78990 | 'DCC1 mutant' vs 'wild type genotype' | genotype | Thioredoxin DCC1 regulates shoot regeneration through modulating multiple genes expression by RNA-seq analyses in Arabidopsis |
-1.7 | | AT1G78990 | 'hypoxia' vs 'normoxia' in 'HRE1-RNAi20' | genotype, growth condition | Transcription profiling by array of Arabidopsis with RNAi-mediated knockdown of AtERF73/HRE1 after growth in hypoxic conditions |
-1.7 | | AT1G78990 | 'srk2dei triple mutant' vs 'wild type' in 'control' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
1.7 | | AT1G78990 | 'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-3' | compound, genotype | Transcription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA |
1.7 | | AT1G78990 | 'Sei-0 x Col-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '2 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
1.6 | | AT1G78990 | '30% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature' | growth condition | Transcription profiling by array of Arabidopsis after growth at different temperatures |
-1.6 | | AT1G78990 | '1 millimolar nitrate' at '8 hour' vs 'control' at '0 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after growth with either ammonium or nitrate |
1.6 | | AT1G78990 | 'ein2-1; untreated' at '0 hour' vs 'wild type; untreated' at '0 hour' | genotype, time, treatment | Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2. |
-1.6 | | AT1G78990 | 'RBRcs mutant' vs 'wild type' in 'sucrose; 1 percent' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose |
-1.5 | | AT1G78990 | 'gul2-1 bri1-5 double mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids |
-1.5 | | AT1G78990 | 'atphb3 anac017' vs 'wild type' | age, genotype | Transcription profiling by high throughput sequencing of Arabidopsis mutants that are defective in mitochondrial proteins |
-1.5 | | AT1G78990 | 'wounding; 6 hour' vs 'none; 0 hour' in 'gamma-butyrolactone; 25 micromolar' | compound, injury, time | The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots |
-1.5 | | AT1G78990 | 'hypoxia' vs 'normoxia' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis with RNAi-mediated knockdown of AtERF73/HRE1 after growth in hypoxic conditions |
-1.5 | | AT1G78990 | '12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-1.5 | | AT1G78990 | '18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
1.5 | | AT1G78990 | 'salt and heat stress' vs 'none' | environmental stress | Transcription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress |
-1.5 | | AT1G78990 | 'Phytophthora parasitica' vs 'none' in 'wild type genotype' | genotype, infect | RNA-sequence of Arabidopsis thaliana lines gsnor1 and Col-0 post infection of Phytophthora parasitica against controls |
1.5 | | AT1G78990 | 'wild type; 16 degree celsius' vs 'wild type; 23 degree celsius' | genotype, temperature | PFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis |
-1.5 | | AT1G78990 | 'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; root' | genotype, growth condition, organism part | Transcription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation |
-1.5 | | AT1G78990 | 'returned to basal medium 1 day after osmotic stress' vs 'control' in 'root' | growth condition, organism part | Transcriptome Profiling of Roots and leaves Under High Osmotic Stress in Arabidopsis |
-1.5 | | AT1G78990 | 'drought stress' vs 'none' in 'control' at '24 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress |
-1.5 | | AT1G78990 | 'AtRsgA-i homozygous knockout' vs 'wild type genotype' | genotype | RNA-seq of Arabidopsis thaliana wild-type and a putative chloroplast ribosome biogenesis mutant AtRsgA homozygous knockout |
-1.5 | | AT1G78990 | '350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for coi1-16 ein2 sid2' | genotype, growth condition | RNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling |
-1.5 | | AT1G78990 | 'Col-0; 350 ppb ozone exposure for 2hr' vs 'Col-0; control' | genotype, treatment | Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana |
-1.5 | | AT1G78990 | 'nlp20; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
-1.4 | | AT1G78990 | '24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-1.4 | | AT1G78990 | '24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-1.4 | | AT1G78990 | '12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-1.4 | | AT1G78990 | 'bli-1 -/-' vs 'wild type genotype' | genotype | BLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana |
-1.4 | | AT1G78990 | 'dehydration stress' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
1.4 | | AT1G78990 | 'pft1-1; 16 degree celsius' vs 'pft1-1; 23 degree celsius' | genotype, temperature | PFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis |
-1.4 | | AT1G78990 | 'sid2-1 mutant; Pseudomonas syringae pv. maculicola str. ES4326' vs 'sid2-1 mutant; mock' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance |
-1.3 | | AT1G78990 | 'auxin' vs 'none' in '35 day' | age, growth condition | Transcription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin |
-1.3 | | AT1G78990 | 'epcr1-/-; epcr2-/-' vs 'wild type genotype' | genotype | The PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq] |
-1.3 | | AT1G78990 | 'drought stress' vs 'none' in 'ABF3 overexpression' at '24 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress |
1.3 | | AT1G78990 | 'light regimen for 6 hour' vs 'continuous dark (no light) regimen' in 'wild type' | genotype, growth condition | Transcription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours |
-1.3 | | AT1G78990 | 'Heterodera schachtii' vs 'none' | infect | Transcription profiling by array of Arabidopsis roots infected with the cyst nematode H. schachtii |
-1.3 | | AT1G78990 | '350 ppb ozone exposure for 2hr' vs 'control' in 'coi1-16 ein2 sid2' | genotype, growth condition | RNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling |
-1.3 | | AT1G78990 | 'elf18; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
-1.2 | | AT1G78990 | 'bli-1 -/-; ire1a -/-' vs 'wild type genotype' | genotype | BLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana |
-1.2 | | AT1G78990 | 'arid2-/-; arid3-/-; arid4-/-' vs 'wild type genotype' | genotype | The PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq] |
-1.2 | | AT1G78990 | 'RBRcs mutant' vs 'wild type' in 'none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose |
1.2 | | AT1G78990 | 'efr-1; elf18' at '10 hour' vs 'wild type; elf18' at '10 hour' | genotype, time, treatment | Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2. |
-1.2 | | AT1G78990 | 'wounding; 3 hour' vs 'none; 0 hour' in 'gamma-butyrolactone; 25 micromolar' | compound, injury, time | The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots |
-1.2 | | AT1G78990 | 'arr22-ox' vs 'wild type' in 'none' | genotype, growth condition | Transcription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin |
-1.2 | | AT1G78990 | '50 micromolar abscisic acid' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
1.2 | | AT1G78990 | 'pdx3-3 mutant' vs 'wild type' | genotype | Transcription profiling by high throughput sequencing of Arabidopsis pdx3 mutant plants |
1.2 | | AT1G78990 | 'Cvi-1' vs 'Ler-2' | genotype | Transcription profiling by array of Arabidopsis lines grown on tilted hard agar surfaces |
-1.2 | | AT1G78990 | 'wild type; UV-B light regimen (345 nm); 1 hour; 305nm' vs 'wild type; UV-B light regimen (305 nm); control' | genotype, light, time, treatment | Transcription profiling of Arabodpsis seedings exposed to UV-B irradiation |
1.2 | | AT1G78990 | 'DMSO; ibr1ibr3ibr10' vs 'DMSO; wild type' | compound, genotype | Expression data from Arabidopsis wild type and ibr1 ibr3 ibr10 triple mutant seedlings root tip segments treated with indole-3-butyric acid (IBA) |
1.2 | | AT1G78990 | 'rid4 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis temperature-dependent later root fasciation mutants |
1.2 | | AT1G78990 | '35S::MIF1; dark' vs '35S::MIF1; light' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions |
1.2 | | AT1G78990 | 'det1-1 mutant' vs 'wild type' in 'continuous dark (no light) regimen' | genotype, growth condition | Transcription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours |
1.2 | | AT1G78990 | '35S::MIF1; dark' vs 'empty pRR2222 vector; dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions |
-1.2 | | AT1G78990 | 'Phytophthora parasitica' vs 'none' in 'gsnor1' | genotype, infect | RNA-sequence of Arabidopsis thaliana lines gsnor1 and Col-0 post infection of Phytophthora parasitica against controls |
-1.2 | | AT1G78990 | 'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
-1.1 | | AT1G78990 | '1 millimolar ammonium' at '8 hour' vs 'control' at '0 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after growth with either ammonium or nitrate |
-1.1 | | AT1G78990 | 'ahk2/ahk3/ahk4 triple mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis ahk mutants |
-1.1 | | AT1G78990 | 'arp6-1; mbd9-3' vs 'wild type genotype' | genotype | Arabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition. [RNA-Seq] |
-1.1 | | AT1G78990 | 'cngc4 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for cngc1, cngc4, or akt1 |
-1.1 | | AT1G78990 | '500 micromolar; phosphate' vs 'none' in 'control' | compound, growth condition | Transcription profiling by array of Arabidopsis roots grown with different concentrations of phosphate |
-1.1 | | AT1G78990 | 'phr1 mutant' vs 'wild type genotype' in 'phosphate deprivation; root' | genotype, growth condition, organism part | Transcription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation |
1.1 | | AT1G78990 | '18 hours' vs '15 hours' | time | CPIB Lateral Root timecourse |
-1.1 | | AT1G78990 | 'complete solution minus iron; 24 hour' vs 'complete solution; 24 hour' in 'Kas-1' | ecotype, growth condition, time | Transcription profiling by array of Arabidopsis Kas-1 and Tsu-1 ecotypes in response to iron deficiency |
-1 | | AT1G78990 | 'arr21c overexpressing line' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing arr21c |
1 | | AT1G78990 | 'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type' | compound, genotype | Transcription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment |
1 | | AT1G78990 | 'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant' | compound, genotype | Transcription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment |
-1 | | AT1G78990 | 'Agrobacterium tumefaciens C58' vs 'none' | infect | Transcription profiling by array of injured Arabidopsis after infection with different strains of Agrobacterium tumefaciens |
-1 | | AT1G78990 | '500 micromolar; phosphate' vs 'none' in 'split root' | compound, growth condition | Transcription profiling by array of Arabidopsis roots grown with different concentrations of phosphate |
-1 | | AT1G78990 | 'mannitol; 300 millimolar' vs 'none' in 'wild type genotype' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
1 | | AT1G78990 | 'synthetic strigolactone GR24 10 micromolar' vs 'DMSO' | compound | Transcription profiling by array of Arabidopsis thaliana seedlings treated with CTL-VI or GR24 |
-1 | | AT1G78990 | 'Space Flight' vs 'none' in '4 day; Col-0' | age, ecotype, environmental stress | Plant development on ISS differs from the development on the ground and is influenced by the genetic background. |
1 | | AT1G78990 | 'ein2-1; elf18' at '2 hour' vs 'wild type; elf18' at '2 hour' | genotype, time, treatment | Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2. |
-1 | | AT1G78990 | '27 hours' vs '24 hours' | time | CPIB Lateral Root timecourse |
-1 | | AT1G78990 | 'iron deprivation' vs. 'control' at '24 hours' in 'root' of 'Kas-1' ecotype | ecotype, organism part, growth condition, time | Transcription profiling by array of Arabidopsis Kas-1 and Tsu-1 grown in iron-deficient medium |
1 | | AT1G78990 | 'se-2 loss of function mutant' vs 'wild type genotype' | genotype | Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq] |
1 | | AT1G78990 | 'hyl1 loss of function mutant' vs 'wild type genotype' | genotype | Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq] |
1 | | AT1G78990 | 'boric acid 5 millimolar' vs 'none' | compound, dose | Expression data from arabidopsis root in response to boron toxicity |