AT2G31070 (TCP10)

arabidopsis thaliana

Transcription factor TCP10

Filter your results

Arabidopsis thaliana
Organism part
Showing 35 experiments:
image/svg+xml leaf root flower fruit
Created with Highcharts 6.2.0adult vascular leafcarpelcauline leafcotyledonflowerflower pedicelfruitfruit septumfruit valvehypocotylleafmixed shoot apical meristem, cotyledon and first leavespetalpetioleplant calluspollenrootroot tiprosette leafseedsepalsiliquestamenstem internodestem node
P
Proteomics
T
Transcriptomics
High
Medium
Low
Below cutoff
No data available

Filter your results

Kingdom
Species
Experiment type
Experimental variables
Regulation
Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
2.6443 × 10-53
AT2G31070'light pulse in the middle of the day' vs 'day time control'growth conditionRNA-seq of Arabidopsis seedlings with or without light pulses treatment in the middle of day or night against untreated controls to study how the light pulses control the phase of the circadian clock
Adjusted p-valueLog2-fold change
7.45 × 10-852.9
AT2G31070'pif quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
4.0821 × 10-23-2.7
AT2G31070'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.2413 × 10-62.7
AT2G31070'polysome-bound RNA; 4 hour; white light' vs'polysome-bound RNA; dark'RNA, time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with white light
Adjusted p-valueLog2-fold change
5.7723 × 10-202.6
AT2G31070'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.1071 × 10-52.5
AT2G31070'steady-state RNA; 4 hour; white light' vs'steady-state RNA; dark'RNA, time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with white light
Adjusted p-valueLog2-fold change
4.1537 × 10-3-2.5
AT2G31070'37 degrees celsius' vs '20 degrees celsius'compound, temperatureTranscription profiling by array of Arabidopsis after heat shock or treatment with tunicamycin or L-azetidine-2-carboxylic acid
Adjusted p-valueLog2-fold change
4.7166 × 10-72.4
AT2G31070'seed after 12 h of stratification (12 h S)' vs 'seed after 1 h of stratification (1 h S)'growth conditionTranscription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination
Adjusted p-valueLog2-fold change
1.8209 × 10-772.3
AT2G31070'det1-1 mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
5.6564 × 10-7-2.3
AT2G31070'RBRcs mutant' vs 'wild type' in 'sucrose; 1 percent'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
5.4006 × 10-62.3
AT2G31070'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.5255 × 10-30-2.2
AT2G31070'ozone; 350 nanoliter' vs 'none' in 'Cvi-0'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
1.641 × 10-422.1
AT2G31070'light regimen for 6 hour' vs 'continuous dark (no light) regimen' in 'wild type'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
6.7561 × 10-72.1
AT2G31070'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '8 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
2.5459 × 10-5-2.1
AT2G31070'dcl1-15 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis wild-type and dcl1-15 torpedo-staged embryos
Adjusted p-valueLog2-fold change
7.0147 × 10-3-2.1
AT2G31070'mkk1;mkk2 knockout; none' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
3.3008 × 10-22.1
AT2G31070'tcx2; WOX5:GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
2.1379 × 10-7-2
AT2G31070'elf18; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.9235 × 10-62
AT2G31070'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '24 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
1.2916 × 10-3-2
AT2G31070'gun1-103; fug1-3 double loss of function mutant' vs 'wild type genotype'genotypeFunctional relationship of Arabidopsis thaliana GUN1 and FUG1 in plastid proteostasis
Adjusted p-valueLog2-fold change
1.0902 × 10-6-1.9
AT2G31070'9 hr hypoxia' vs '9 hr control' in 'polysomal mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
2.6724 × 10-8-1.8
AT2G31070''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 10 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
1.89 × 10-7-1.8
AT2G31070'DCC1 mutant' vs 'wild type genotype'genotypeThioredoxin DCC1 regulates shoot regeneration through modulating multiple genes expression by RNA-seq analyses in Arabidopsis
Adjusted p-valueLog2-fold change
1.9443 × 10-7-1.8
AT2G31070'dexamethasone-induced STM overexpression' vs 'wild type' at '216 hour'phenotype, sampling time pointTranscription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
Adjusted p-valueLog2-fold change
6.1077 × 10-3-1.8
AT2G31070'wox5-1 mutant' vs 'wild type genotype' in 'wox5 GFP positive'genotype, phenotypeFrom gene networks to network motif dynamics: how the presense of positive feed-back and -forward loops between PERIANTHIA, WUSCHEL-RELATED HOMEOBOX5 and GRF-INTERACTING FACTOR 1 modulates gene expression and function in the Arabidopsis roots.
Adjusted p-valueLog2-fold change
1.5117 × 10-6-1.7
AT2G31070'dexamethasone-induced STM overexpression' vs 'dexamethasone-induced STM knock down by RNAi' at '216 hour'phenotype, sampling time pointTranscription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
Adjusted p-valueLog2-fold change
3.3367 × 10-6-1.7
AT2G31070'20% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature'growth conditionTranscription profiling by array of Arabidopsis after growth at different temperatures
Adjusted p-valueLog2-fold change
2.619 × 10-41.7
AT2G31070'4 days in darkness and 18 hour in red continuous light' vs '4 days in darkness and 1 hour in red continuous light' in 'wild type'genotype, growth conditionGene expression in pif3 mutant under dark and in wt under Red 1h and Red 18h
Adjusted p-valueLog2-fold change
8.5906 × 10-4-1.7
AT2G31070'low water potential stress' vs 'control' in 'wild type'genotype, growth conditionComparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant
Adjusted p-valueLog2-fold change
8.2636 × 10-8-1.6
AT2G31070'PAP, 100 micromolar; lithium chloride, 100 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
1.6008 × 10-5-1.6
AT2G31070'lithium chloride, 100 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
3.7397 × 10-4-1.6
AT2G31070'syringolin; 20 micromolar' vs 'none' in 'uninfected' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
1.2978 × 10-31.6
AT2G31070'seu-3 ant-1 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for seuss and/or aintegumenta
Adjusted p-valueLog2-fold change
1.2978 × 10-31.6
AT2G31070'seu-3 ant-1 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for ant1 and seu3
Adjusted p-valueLog2-fold change
9.0689 × 10-24-1.5
AT2G31070'warm/hot temperature regimen' vs 'none' in '35S:HSFA1b-RFP'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
3.223 × 10-19-1.5
AT2G31070'350 ppb ozone exposure for 2hr' vs 'control' in 'tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
2.7795 × 10-10-1.5
AT2G31070'warm/hot temperature regimen' vs 'none' in 'wild type genotype'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
4.6765 × 10-9-1.5
AT2G31070'excess light; none; 0.5 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
3.9362 × 10-7-1.5
AT2G31070'drought environment' vs 'normal watering' in 'wild type genotype'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.0882 × 10-61.5
AT2G31070'gia3 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for gia3
Adjusted p-valueLog2-fold change
1.8634 × 10-6-1.5
AT2G31070'ethanol' at '4 hour' vs 'control' at '0 hour'compound, timeTranscription profiling by array of Arabidopsis XW119 seedlings after induction with ethanol
Adjusted p-valueLog2-fold change
3.8198 × 10-5-1.5
AT2G31070'low water potential stress' vs 'control' in 'hai1-2 mutant'genotype, growth conditionComparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant
Adjusted p-valueLog2-fold change
1.5968 × 10-41.5
AT2G31070'ant-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for ant1 and seu3
Adjusted p-valueLog2-fold change
1.5968 × 10-41.5
AT2G31070'ant-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for seuss and/or aintegumenta
Adjusted p-valueLog2-fold change
2.2818 × 10-41.5
AT2G31070'rps2 mutant' vs 'wild type genotype' in 'Pseudomonas syringae pv. maculicola carrying AvrRpt2' at '10 hour'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
3.1152 × 10-2-1.5
AT2G31070'ANAC017 OEb' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
1.3932 × 10-19-1.4
AT2G31070'Ler/Kas-2 hybrid' vs 'Kas-2' in 'wild type genotype'ecotype, genotypeRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Adjusted p-valueLog2-fold change
1.4035 × 10-9-1.4
AT2G31070'fbl17-1 (GK_170-E02)' vs 'wild type genotype'genotypeRNAseq analysis of Arabidopsis Col-0 wild-type and fbl17 mutant seedlings
Adjusted p-valueLog2-fold change
7.954 × 10-9-1.4
AT2G31070'low light; DBMIB; 24 micromolar; 0.5 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
2.4585 × 10-8-1.4
AT2G31070'24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei K1; avirulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.2211 × 10-6-1.4
AT2G31070'drought environment' vs 'normal watering' in 'vtc2.5 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.2995 × 10-6-1.4
AT2G31070'seed germinating in continuous light 6 h SL' vs 'seed germinating in continuous light 1 h SL'growth conditionTranscription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination
Adjusted p-valueLog2-fold change
9.195 × 10-6-1.4
AT2G31070'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-2 mutant'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
5.2599 × 10-5-1.4
AT2G31070'9 hr hypoxia' vs '9 hr control' in 'total mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
6.7462 × 10-5-1.4
AT2G31070'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.4882 × 10-3-1.4
AT2G31070'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 gpa1-4 double mutant; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
2.9694 × 10-221.3
AT2G31070'sulki1-8 mutant' vs 'wild type genotype' in 'Ler/Kas-2 hybrid'ecotype, genotypeRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Adjusted p-valueLog2-fold change
4.0712 × 10-12-1.3
AT2G31070'wild type; Pseudomonas syringae pv. maculicola str. ES4326' vs 'wild type; mock'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance
Adjusted p-valueLog2-fold change
1.5167 × 10-9-1.3
AT2G31070'350 ppb ozone exposure for 2hr' vs 'none' in 'wild type'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
6.3634 × 10-9-1.3
AT2G31070'CT101; 350 ppb ozone exposure for 2hr' vs 'CT101; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.7805 × 10-6-1.3
AT2G31070'nlp20; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.4222 × 10-5-1.3
AT2G31070'Plectosphaerella cucumerina inoculation' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina
Adjusted p-valueLog2-fold change
3.2766 × 10-41.3
AT2G31070'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
4.8433 × 10-4-1.3
AT2G31070'Flg-22 1uM' vs 'water' at '1 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
4.2195 × 10-3-1.3
AT2G31070'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
4.272 × 10-3-1.3
AT2G31070'homozygous AtCesA4' vs 'heterozygous AtCesA4'genotypeTranscription profiling by array of Arabidopsis cellulose synthase mutants
Adjusted p-valueLog2-fold change
4.5211 × 10-3-1.3
AT2G31070'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
4.6383 × 10-3-1.3
AT2G31070'Pseudomonas syringae pv. Maculicola with effector AvrRpt2' at '6 hour' vs 'none'time, treatmentExpression profiling of Col-0 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
1.7219 × 10-2-1.3
AT2G31070'flg22' vs 'none' in '35S::AFB1'genotype, treatmentTranscription profiling by array of Arabidopsis expressing miR393 or AFB1 under the control of the 35S promoter after treatment with auxin and/or flg22
Adjusted p-valueLog2-fold change
1.8532 × 10-2-1.3
AT2G31070'fug1-3 loss of function mutant' vs 'wild type genotype'genotypeFunctional relationship of Arabidopsis thaliana GUN1 and FUG1 in plastid proteostasis
Adjusted p-valueLog2-fold change
2.7051 × 10-18-1.2
AT2G31070'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky75 mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
4.8048 × 10-12-1.2
AT2G31070'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
2.1035 × 10-8-1.2
AT2G31070'Col-0; 350 ppb ozone exposure for 2hr' vs 'Col-0; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.1035 × 10-8-1.2
AT2G31070'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for coi1-16 ein2 sid2'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
1.9403 × 10-7-1.2
AT2G31070'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'none'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
1.6995 × 10-6-1.2
AT2G31070'drought environment' vs 'normal watering' in 'vtc2 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.7226 × 10-6-1.2
AT2G31070'KZ-10 x Mrk-0' vs 'Mrk-0'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
2.9188 × 10-6-1.2
AT2G31070'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-1 mutant'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
5.078 × 10-61.2
AT2G31070'pif1pif3pif4pif5 (pifq) mutant' vs 'wild type genotype'genotypeRNA-seq of coding RNA of Arabidopsis Phytochrome (phy)-Interacting bHLH Factor (PIF) mutants against wild-type controls to study target genes of PIF
Adjusted p-valueLog2-fold change
5.4002 × 10-6-1.2
AT2G31070'30% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature'growth conditionTranscription profiling by array of Arabidopsis after growth at different temperatures
Adjusted p-valueLog2-fold change
4.8421 × 10-5-1.2
AT2G31070'1 micromolar salicylic acid at ZT24' vs 'water at ZT24' at '3 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)
Adjusted p-valueLog2-fold change
1.7448 × 10-41.2
AT2G31070'pif1pif3pif4pif5 (pifq) mutant' vs 'wild type' in 'seedling; darkness'developmental stage, genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for pif1, pif3, pif4 and pif5 after growth in darkness or red light
Adjusted p-valueLog2-fold change
4.723 × 10-41.2
AT2G31070'seu-3 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for seuss and/or aintegumenta
Adjusted p-valueLog2-fold change
4.723 × 10-41.2
AT2G31070'seu-3 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for ant1 and seu3
Adjusted p-valueLog2-fold change
1.7104 × 10-3-1.2
AT2G31070'sid2-2; Alternaria brassicicola' at '24 hours post infection' vs 'wild type; mock' at '24 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
2.0561 × 10-31.2
AT2G31070'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.2125 × 10-3-1.2
AT2G31070'PAP, 100 micromolar; lithium chloride, 100 millimolar; ATP, 1 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
7.0722 × 10-3-1.2
AT2G31070'Plectosphaerella cucumerina inoculation' vs 'control' in 'agb1-1 mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina
Adjusted p-valueLog2-fold change
8.1596 × 10-3-1.2
AT2G31070'5-aza-2-deoxycytidine 20 milligram per liter' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ddm1
Adjusted p-valueLog2-fold change
1.0384 × 10-2-1.2
AT2G31070'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'none' at '0 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
2.602 × 10-211.1
AT2G31070'Ler x C24 F1 hybrid' vs 'Landsberg erecta ecotype'genotypeTranscription profiling by high throughput sequencing of Arabidopsis Ler and C24 ecotypes and their reciprocal hybrids
Adjusted p-valueLog2-fold change
4.9772 × 10-15-1.1
AT2G31070'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky25, wrky33 double mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
1.1251 × 10-81.1
AT2G31070'14 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
4.9342 × 10-71.1
AT2G31070'trichostatin; 1 micromolar' vs 'none' in 'pUBI10::mCherry-GR-linker-WUS'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
2.5976 × 10-6-1.1
AT2G31070'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
7.4138 × 10-61.1
AT2G31070'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
7.6017 × 10-6-1.1
AT2G31070'drought stress' vs 'none' in 'ABF3 overexpression' at '2 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress
Adjusted p-valueLog2-fold change
2.3905 × 10-5-1.1
AT2G31070'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
2.6452 × 10-5-1.1
AT2G31070'4 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
1.9917 × 10-4-1.1
AT2G31070'pvip1;pvip2' vs 'none'rnai, RNA interferenceTranscription profiling by array of Arabidopsis after RNAi-mediated knock-down of pvip1 and pvip2
Adjusted p-valueLog2-fold change
2.1777 × 10-4-1.1
AT2G31070'drought stress' vs 'none' in 'control' at '2 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress
Adjusted p-valueLog2-fold change
4.1382 × 10-4-1.1
AT2G31070'ANAC017 OEa' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
2.3205 × 10-3-1.1
AT2G31070'flg22' vs 'water' at '3 hour'compound, timeTranscription profiling by array of Arabidopsis after treatment with oligogalacturonides
Adjusted p-valueLog2-fold change
4.4994 × 10-3-1.1
AT2G31070'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
5.4914 × 10-3-1.1
AT2G31070'flg22' vs 'water' at '1 hour'compound, timeTranscription profiling by array of Arabidopsis after treatment with oligogalacturonides
Adjusted p-valueLog2-fold change
5.5424 × 10-3-1.1
AT2G31070'HrpZ 10uM' vs 'water' at '1 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
5.7109 × 10-3-1.1
AT2G31070'Pseudomonas syringae DC3000::avrRpm1' vs 'control' in '4 hour'age, growth conditionTranscription profiling by array of Arabidopsis after inoculation with Pseudomonas syringae
Adjusted p-valueLog2-fold change
2.5133 × 10-2-1.1
AT2G31070'flg22' vs 'none' in '35S::miR393'genotype, treatmentTranscription profiling by array of Arabidopsis expressing miR393 or AFB1 under the control of the 35S promoter after treatment with auxin and/or flg22
Adjusted p-valueLog2-fold change
3.637 × 10-2-1.1
AT2G31070'wild type; Pseudomonas syringae pv. tomato DC3000' vs 'wild type; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
9.0757 × 10-131
AT2G31070'silver(1+) nitrate, 10 micromolar; N-benzyladenine, 3 micromolar' vs 'silver(1+) nitrate, 10 micromolar'stimulusEthylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway.
Adjusted p-valueLog2-fold change
2.688 × 10-12-1
AT2G31070'wrky33 mutant; Botrytis cinerea 2100' vs 'wrky33 mutant; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
2.0084 × 10-7-1
AT2G31070'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
1.8943 × 10-6-1
AT2G31070'gul2-1 bri1-5 double mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids
Adjusted p-valueLog2-fold change
2.3314 × 10-6-1
AT2G31070'arr21c overexpressing line' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing arr21c
Adjusted p-valueLog2-fold change
5.6175 × 10-6-1
AT2G31070'Te; 350 ppb ozone exposure for 2hr' vs 'Te; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.769 × 10-6-1
AT2G31070'KZ-10 x Mrk-0' vs 'KZ-10'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
3.1188 × 10-51
AT2G31070'pepr1-1 Pepr2-3; Pep2' at '2 hour' vs 'wild type; Pep2' at '2 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
4.0455 × 10-51
AT2G31070'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
7.0903 × 10-5-1
AT2G31070'csn3-1 mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
7.598 × 10-5-1
AT2G31070'Blumeria graminis f.sp. hordei' vs 'none' in 'ataf1-1'genotype, infectTranscription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei
Adjusted p-valueLog2-fold change
8.1194 × 10-5-1
AT2G31070'MYB96 overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing MYB96 or myb96 knock out mutants
Adjusted p-valueLog2-fold change
1.9107 × 10-4-1
AT2G31070'Pseudomonas syringae ES4326' vs 'none' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
2.1314 × 10-41
AT2G31070'after cold treatment at 4 degrees Celsius' vs 'before cold treatment'growth conditionTranscription profiling of Arabdiposis plants before and after cold treatment using spike-in controls to allow measurement of absolute mRNA expression at the global level
Adjusted p-valueLog2-fold change
2.3421 × 10-41
AT2G31070'from low light to high light; wild type' vs 'control; wild type'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
3.1936 × 10-4-1
AT2G31070'15 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
3.6923 × 10-4-1
AT2G31070'sucrose; 1 percent' vs 'none' in 'RBRcs mutant'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
4.8867 × 10-4-1
AT2G31070'Sclerotinia sclerotiorum' vs 'none' in 'coi1-2 mutant' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
6.5213 × 10-4-1
AT2G31070'ahk2/ahk3/ahk4 triple mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis ahk mutants
Adjusted p-valueLog2-fold change
6.5657 × 10-4-1
AT2G31070'locally damaged by leafminer' vs 'control'growth conditionTranscription profiling by array of Arabidopsis leaves with localised or systemic damage by leafminer Liriomyza huidobrensis
Adjusted p-valueLog2-fold change
1.42 × 10-31
AT2G31070'sucrose; 1 percent' vs 'none' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
1.7994 × 10-3-1
AT2G31070'GST-NPP1 1uM' vs 'water' at '1 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
1.8306 × 10-3-1
AT2G31070'scrm-D' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings
Adjusted p-valueLog2-fold change
1.9268 × 10-31
AT2G31070'4 degree celsius' vs '20 degree celsius' in 'Coimbra'ecotype, temperatureTranscription profiling by array of nine ecotypes of Arabidopsis before and after cold acclimation
Adjusted p-valueLog2-fold change
4.1482 × 10-3-1
AT2G31070'Pseudomonas syringae DC3000' vs 'control' in '12 hour'age, growth conditionTranscription profiling by array of Arabidopsis after inoculation with Pseudomonas syringae
Adjusted p-valueLog2-fold change
4.628 × 10-3-1
AT2G31070'Pseudomonas syringae pv. tomato' vs 'none' in 'ulp1c/ulp1d double mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
4.7965 × 10-3-1
AT2G31070'syringolin; 20 micromolar' vs 'none' in 'powdery mildew infected' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
4.8548 × 10-31
AT2G31070'atbzip16; red-light and long-day (0.5 μmole m-2 sec-1)' vs 'atbzip16; dark'genotype, lightTranscription profiling by array of Arabidopsis early seedling development
Adjusted p-valueLog2-fold change
1.1525 × 10-2-1
AT2G31070'2 hr hypoxia' vs '2 hr control' in 'polysomal mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
1.2329 × 10-21
AT2G31070'wounding; 6 hour' vs 'none; 0 hour' in 'gamma-butyrolactone; 25 micromolar'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
1.9429 × 10-21
AT2G31070'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
1.9859 × 10-2-1
AT2G31070'empty pRR2222 vector; dark' vs 'empty pRR2222 vector; light'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
2.0864 × 10-21
AT2G31070'tmk1-1' vs 'wild type genotype'genotypeTMK1-mediated transcriptional auxin signaling guides differential growth in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.424 × 10-2-1
AT2G31070'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '1 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots