AT2G36100 (CASP1)

arabidopsis thaliana

Casparian strip membrane protein 1

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Arabidopsis thaliana
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Showing 35 experiments:
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
6.1745 × 10-21-10.7
AT2G36100'drought environment' vs 'normal watering' in 'vtc2.5 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.8953 × 10-15-9.1
AT2G36100'drought environment' vs 'normal watering' in 'vtc2 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.1586 × 10-14-8.6
AT2G36100'tcx2; FEZ:FEZ-GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
3.9837 × 10-18-8
AT2G36100'drought environment' vs 'normal watering' in 'wild type genotype'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.9204 × 10-19-6.6
AT2G36100'tcx2; CYCD6:GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
3.1168 × 10-29-6.5
AT2G36100'tcx2; TMO5:3xGFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
4.3804 × 10-19-5.6
AT2G36100'tcx2; WOX5:GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
3.8756 × 10-5-4.6
AT2G36100'5-aza-2-deoxycytidine 20 milligram per liter' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ddm1
Adjusted p-valueLog2-fold change
2.9348 × 10-155-4.5
AT2G36100'myb36-1 mutant' vs 'wild type' in 'root'genotype, organism partTranscription profiling by high throughput sequencing of the endodermis of Arabidopsis myb36 mutants
Adjusted p-valueLog2-fold change
2.2659 × 10-7-4.5
AT2G36100'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
1.2486 × 10-4-4.4
AT2G36100'15 hours' vs '12 hours'timeCPIB Lateral Root timecourse
Adjusted p-valueLog2-fold change
2.6038 × 10-6-4.1
AT2G36100'csn3-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
4.7842 × 10-104
AT2G36100'seed germinating in continuous light 48 h SL' vs 'seed germinating in continuous light 24 h SL'growth conditionTranscription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination
Adjusted p-valueLog2-fold change
8.9059 × 10-7-3.9
AT2G36100'csn4-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
5.927 × 10-7-3.6
AT2G36100'met1 mutant' vs 'wild type' at '4 hour'genotype, timeTranscription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours
Adjusted p-valueLog2-fold change
6.5738 × 10-19-3.4
AT2G36100'myb36-1 (pSCR::ER:GFP)' vs 'wild type (pSCR::ER:GFP)' in 'root endodermis'genotype, organism partTranscription profiling by high throughput sequencing of the endodermis of Arabidopsis myb36 mutants
Adjusted p-valueLog2-fold change
1.8034 × 10-393.3
AT2G36100'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'trichostatin; 1 micromolar'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
9.1339 × 10-10-3.3
AT2G36100'wox5-1 mutant' vs 'wild type genotype' in 'wox5 GFP positive'genotype, phenotypeFrom gene networks to network motif dynamics: how the presense of positive feed-back and -forward loops between PERIANTHIA, WUSCHEL-RELATED HOMEOBOX5 and GRF-INTERACTING FACTOR 1 modulates gene expression and function in the Arabidopsis roots.
Adjusted p-valueLog2-fold change
2.154 × 10-6-3.1
AT2G36100'dicamba; 7 millimolar' vs 'none'compoundTranscription profiling by array of Arabidopsis after treatment with dicamba
Adjusted p-valueLog2-fold change
6.628 × 10-47-3
AT2G36100'epcr1-/-; epcr2-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
8.5079 × 10-4-2.7
AT2G36100'low pH (pH 4.6)' vs 'standard pH (pH 5.7)' in 'root cortex'growth condition, organism partTranscription profiling by array of Arabidopsis root cells after growth in low pH conditions
Adjusted p-valueLog2-fold change
7.1296 × 10-32.7
AT2G36100'120 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
1.4409 × 10-8-2.6
AT2G36100'auxin' vs 'none' in '7 day'age, growth conditionTranscription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin
Adjusted p-valueLog2-fold change
7.6659 × 10-62.6
AT2G36100'gun1-103; fug1-3 double loss of function mutant' vs 'wild type genotype'genotypeFunctional relationship of Arabidopsis thaliana GUN1 and FUG1 in plastid proteostasis
Adjusted p-valueLog2-fold change
3.9958 × 10-32.6
AT2G36100'pft1-1; 16 degree celsius' vs 'pft1-1; 23 degree celsius'genotype, temperaturePFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis
Adjusted p-valueLog2-fold change
4.6818 × 10-32.6
AT2G36100'NaCl' vs 'control' in 'cortex cells'cell type, growth conditionTranscription profiling by array of Arabidopsis root cells after treatment with NaCl
Adjusted p-valueLog2-fold change
1.6506 × 10-22.6
AT2G36100'480 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
1.3323 × 10-7-2.5
AT2G36100'35S::WRKY23-SRDX' vs 'wild type genotype' in 'auxin; 10 micromolar'compound, genotypeMicroarray designed to find PIN polarity regulators downstream of TIR1/AFB
Adjusted p-valueLog2-fold change
1.4579 × 10-6-2.5
AT2G36100'9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'total mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
3.2361 × 10-32.5
AT2G36100'wild type; 16 degree celsius' vs 'wild type; 23 degree celsius'genotype, temperaturePFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis
Adjusted p-valueLog2-fold change
3.624 × 10-8-2.3
AT2G36100'salicylic acid' vs 'none' in 'sdh1 mutant'compound, genotypeTranscription profiling by array of Arabidopsis mutant for sdh1 after treatment with salicylic acid
Adjusted p-valueLog2-fold change
4.9057 × 10-2-2.3
AT2G36100'Meloidogyne incognita infested region' vs 'Meloidogyne incognita non-infested region' at '14 day'sampling site, timeTranscription profiling by array of Arabidopsis root cells infested with Meloidogyne incognita 14 or 21 days after inoculation
Adjusted p-valueLog2-fold change
1.4539 × 10-6-2.2
AT2G36100'auxin' vs 'none' in '35 day'age, growth conditionTranscription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin
Adjusted p-valueLog2-fold change
6.3783 × 10-5-2.2
AT2G36100'Rhizoctonia solani AG2-1' vs 'mock'infectExpression data in whole Arabidopsis seedlings after treatment with Rhizoctonia solani AG8 and AG2-1
Adjusted p-valueLog2-fold change
6.5617 × 10-4-2.2
AT2G36100'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
1.6779 × 10-3-2.2
AT2G36100'treated with 2-(2,4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid; 5 micromolar' vs 'control'compoundActivation of auxin signalling counteracts photorespiratory hydrogen peroxide dependent cell death
Adjusted p-valueLog2-fold change
2.1286 × 10-32.2
AT2G36100'salt and heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
2.401 × 10-2-2.2
AT2G36100'arf7 arf19 double mutant' vs 'wild type' in 'Root Mature Zone'genotype, organism partTranscription profiling by array of different organism parts of Arabidopsis mutant for arf7 and arf19
Adjusted p-valueLog2-fold change
4.0541 × 10-25-2.1
AT2G36100'atphb3 anac017' vs 'wild type'age, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants that are defective in mitochondrial proteins
Adjusted p-valueLog2-fold change
2.8565 × 10-23-2.1
AT2G36100'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
8.5574 × 10-16-2.1
AT2G36100'arid2-/-; arid3-/-; arid4-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
6.8601 × 10-7-2.1
AT2G36100'Phytophthora parasitica' vs 'none' in 'wild type genotype'genotype, infectRNA-sequence of Arabidopsis thaliana lines gsnor1 and Col-0 post infection of Phytophthora parasitica against controls
Adjusted p-valueLog2-fold change
6.2634 × 10-5-2.1
AT2G36100'Rhizoctonia solani AG8' vs 'mock'infectExpression data in whole Arabidopsis seedlings after treatment with Rhizoctonia solani AG8 and AG2-1
Adjusted p-valueLog2-fold change
6.2711 × 10-222
AT2G36100'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
3.475 × 10-72
AT2G36100'bzr1-1D;bri1-116 double mutant' vs 'bri1-116 null mutant'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
1.3447 × 10-5-2
AT2G36100'srk2dei triple mutant' vs 'wild type' in 'control'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
4.8336 × 10-4-2
AT2G36100'AtGATA2ox transgenic' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing AtGATA2 or mutant for bri1
Adjusted p-valueLog2-fold change
9.5685 × 10-42
AT2G36100'fug1-3 loss of function mutant' vs 'wild type genotype'genotypeFunctional relationship of Arabidopsis thaliana GUN1 and FUG1 in plastid proteostasis
Adjusted p-valueLog2-fold change
1.3126 × 10-3-2
AT2G36100'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
4.3149 × 10-32
AT2G36100'heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
7.7368 × 10-7-1.9
AT2G36100'9 hr hypoxia' vs '9 hr control' in 'total mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
3.9636 × 10-6-1.9
AT2G36100'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '6 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
5.2117 × 10-41.9
AT2G36100'35S::MIF1; dark' vs '35S::MIF1; light'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
1.6912 × 10-31.9
AT2G36100'phosphate deprivation' vs 'control' in 'wild type genotype; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
5.2176 × 10-7-1.8
AT2G36100'estradiol; 2 micromolar' vs 'DMSO' at '24 hour'compound, timeTranscription profiling by array of Arabidopsis expressing DUO1 as a result of induction with estradiol
Adjusted p-valueLog2-fold change
8.9824 × 10-5-1.8
AT2G36100'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'wild type' at '3 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
4.2791 × 10-66-1.7
AT2G36100'silver(1+) nitrate, 10 micromolar; N-benzyladenine, 3 micromolar' vs 'silver(1+) nitrate, 10 micromolar'stimulusEthylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway.
Adjusted p-valueLog2-fold change
2.2625 × 10-23-1.7
AT2G36100'Space Flight' vs 'none' in '4 day; Col-0'age, ecotype, environmental stressPlant development on ISS differs from the development on the ground and is influenced by the genetic background.
Adjusted p-valueLog2-fold change
5.4844 × 10-16-1.7
AT2G36100'abscisic acids; 100 micromolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
5.5469 × 10-9-1.7
AT2G36100'arr21c overexpressing line' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing arr21c
Adjusted p-valueLog2-fold change
1.5645 × 10-81.7
AT2G36100'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'none'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
2.7078 × 10-31.7
AT2G36100'pvip1; pvip2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for pvip1 and pvip2
Adjusted p-valueLog2-fold change
1.0936 × 10-2-1.7
AT2G36100'L2.4 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis expressing mutant forms of beet curly-top virus L2 protein
Adjusted p-valueLog2-fold change
1.5047 × 10-14-1.6
AT2G36100'Space Flight' vs 'none' in '4 day; Wassilewskija ecotype'age, ecotype, environmental stressPlant development on ISS differs from the development on the ground and is influenced by the genetic background.
Adjusted p-valueLog2-fold change
6.4761 × 10-9-1.6
AT2G36100'lsm4 mutant' vs 'wild type' in 'Columbia ecotype'ecotype, genotypeTranscription profiling by high throughput sequencing of Arabidopsis lsm4-1 mutants and sad1/lsm5 double mutants
Adjusted p-valueLog2-fold change
6.9504 × 10-5-1.6
AT2G36100'salicylic acid' vs 'none' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis mutant for sdh1 after treatment with salicylic acid
Adjusted p-valueLog2-fold change
4.5767 × 10-3-1.6
AT2G36100's1p -/-; s2p -/-' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
9.315 × 10-3-1.6
AT2G36100'dehydration stress' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
4.0741 × 10-141.5
AT2G36100'se-2 loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
1.045 × 10-121.5
AT2G36100'se-2; atxr5; atxr6 triple loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
1.4934 × 10-7-1.5
AT2G36100'abscisic acid; 50 micromolar' vs 'mock' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
4.4821 × 10-7-1.5
AT2G36100'gapcp mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for gapcp
Adjusted p-valueLog2-fold change
1.9924 × 10-5-1.5
AT2G36100'bri1-116 null mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing AtGATA2 or mutant for bri1
Adjusted p-valueLog2-fold change
2.166 × 10-5-1.5
AT2G36100'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-4'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
2.6503 × 10-5-1.5
AT2G36100'bri1-116 null mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
1.4122 × 10-31.5
AT2G36100'ethanol-inducible TOC1 transgenic line' vs 'wild type' in 'ethanol; 2.5 percent; 13 days in 12 h light/12 h dark (LD)'compound, genotype, growth conditionGene expression from Inducible TOC1 expression in Arabidopsis seedlings
Adjusted p-valueLog2-fold change
2.7248 × 10-31.5
AT2G36100'empty pRR2222 vector; dark' vs 'empty pRR2222 vector; light'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
1.4225 × 10-2-1.5
AT2G36100'18 hours' vs '15 hours'timeCPIB Lateral Root timecourse
Adjusted p-valueLog2-fold change
1.6736 × 10-2-1.5
AT2G36100'srk2dei triple mutant' vs 'wild type' in 'dehydration stress'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
7.5804 × 10-28-1.4
AT2G36100'det1-1 mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
5.3386 × 10-151.4
AT2G36100'cle40-2 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis root tip from crn-3, clv2-gabi, and cle40-2 mutants
Adjusted p-valueLog2-fold change
5.0465 × 10-8-1.4
AT2G36100'fbl17-1 (GK_170-E02)' vs 'wild type genotype'genotypeRNAseq analysis of Arabidopsis Col-0 wild-type and fbl17 mutant seedlings
Adjusted p-valueLog2-fold change
1.8531 × 10-6-1.4
AT2G36100'bleomycin' vs 'none'stimulusTranscription profiling by array of Arabidopsis seedlings grown after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment to identify synergistically induced defence genes
Adjusted p-valueLog2-fold change
1.2434 × 10-5-1.4
AT2G36100'bak1-3; Pep2' at '10 hour' vs 'wild type; Pep2' at '10 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
1.4566 × 10-5-1.4
AT2G36100'pp7l-1 loss of function mutant' vs 'wild type genotype'genotypeSERINE/THREONINE-PROTEIN PHOSPHATASE7-LIKE PP7L Regulates Chloroplast Development
Adjusted p-valueLog2-fold change
2.2914 × 10-5-1.4
AT2G36100'met1 mutant' vs 'wild type' at '6 hour'genotype, timeTranscription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours
Adjusted p-valueLog2-fold change
3.0084 × 10-51.4
AT2G36100'phosphate-lacking medium' vs 'complete medium' in 'wild type'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
7.9077 × 10-51.4
AT2G36100'phosphate-lacking medium' vs 'complete medium' in 'spx1,spx2 double mutant'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
1.1809 × 10-4-1.4
AT2G36100'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'wild type' at '1 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
3.7111 × 10-4-1.4
AT2G36100'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '1 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
7.1858 × 10-4-1.4
AT2G36100'clf28 mutant' vs 'wild type' in 'shoot'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
2.5938 × 10-3-1.4
AT2G36100'trichostatin A 2.5 milligram per liter' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ddm1
Adjusted p-valueLog2-fold change
5.6944 × 10-3-1.4
AT2G36100'12 hours' vs '9 hours'timeCPIB Lateral Root timecourse
Adjusted p-valueLog2-fold change
1.987 × 10-2-1.4
AT2G36100'phr1 mutant' vs 'wild type genotype' in 'phosphate deprivation; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
4.2053 × 10-26-1.3
AT2G36100'pif quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
7.1363 × 10-13-1.3
AT2G36100'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '6 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
5.7342 × 10-11-1.3
AT2G36100'tunicamycin; 5 microgram per milliliter' vs 'none' in 'ire1b mutant'compound, genotypeExploring the link between ER stress and autophagy in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.9091 × 10-11-1.3
AT2G36100'mannitol; 300 millimolar' vs 'none' in 'pyl duodecuple loss of function mutant'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
7.5745 × 10-11-1.3
AT2G36100'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
1.4289 × 10-5-1.3
AT2G36100'Phytophthora parasitica' vs 'none' in 'gsnor1'genotype, infectRNA-sequence of Arabidopsis thaliana lines gsnor1 and Col-0 post infection of Phytophthora parasitica against controls
Adjusted p-valueLog2-fold change
1.7303 × 10-5-1.3
AT2G36100'srk2dei triple mutant' vs 'wild type' in '50 micromolar abscisic acid'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
5.6675 × 10-51.3
AT2G36100'500 micromolar; phosphate' vs 'none' in 'control'compound, growth conditionTranscription profiling by array of Arabidopsis roots grown with different concentrations of phosphate
Adjusted p-valueLog2-fold change
6.4605 × 10-51.3
AT2G36100'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'spx1,spx2 double mutant'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
1.0071 × 10-4-1.3
AT2G36100'csn3-1 mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
1.2172 × 10-4-1.3
AT2G36100'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '3 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
1.8804 × 10-3-1.3
AT2G36100'paclobutrazol; 20 micromolar' vs 'none' in 'embryo'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
1.973 × 10-31.3
AT2G36100'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.6944 × 10-3-1.3
AT2G36100'AGL15 overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for agl15 and agl18 or overexpressing AGL15 during somatic embryogenesis
Adjusted p-valueLog2-fold change
7.2986 × 10-11-1.2
AT2G36100'rpotmp anac017' vs 'wild type'age, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants that are defective in mitochondrial proteins
Adjusted p-valueLog2-fold change
1.5824 × 10-6-1.2
AT2G36100'tunicamycin; 5 microgram per milliliter' vs 'none' in 'ire1a; ire1b double mutant'compound, genotypeExploring the link between ER stress and autophagy in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.9284 × 10-6-1.2
AT2G36100'nph4-1 arf19-1 mutant' vs 'wild type' in 'no compound'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
2.4521 × 10-6-1.2
AT2G36100'nph4-1 arf19-1 mutant' vs 'wild type' in 'indole-3-acetic acid'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
2.8568 × 10-6-1.2
AT2G36100'bleomycin and 2, 6-dichloroisonicotinic acid' vs 'none'stimulusTranscription profiling by array of Arabidopsis seedlings grown after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment to identify synergistically induced defence genes
Adjusted p-valueLog2-fold change
2.9291 × 10-5-1.2
AT2G36100'estradiol; 2 micromolar' vs 'DMSO' at '12 hour'compound, timeTranscription profiling by array of Arabidopsis expressing DUO1 as a result of induction with estradiol
Adjusted p-valueLog2-fold change
4.6979 × 10-5-1.2
AT2G36100'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '3 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
6.9055 × 10-5-1.2
AT2G36100'9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'polysomal mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
1.3579 × 10-41.2
AT2G36100'ahk2ahk3' vs 'wild type' in '23 degree celsius'genotype, temperatureTranscription profiling by array of genes regulated by ahk2 ahk3 in response to cold in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.4624 × 10-4-1.2
AT2G36100'RBRcs mutant' vs 'wild type' in 'none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
4.0409 × 10-3-1.2
AT2G36100'csn4-1 mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
5.3646 × 10-31.2
AT2G36100'0.1 mM nitrate' vs '10 mM nitrate' in 'MtNPF1.7 expression'genotype, growth conditionTranscriptional profiling of Arabidopsis constitutively expressing Medicago truncatula NRT1 PTR FAMILY 1.7
Adjusted p-valueLog2-fold change
5.9442 × 10-3-1.2
AT2G36100'abscisic acid; 20 micromolar' vs 'none' in 'embryo'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
6.241 × 10-3-1.2
AT2G36100'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-3'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
7.7095 × 10-3-1.2
AT2G36100'gtl1-1 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis trichome from 5th and 6th rosette leaves of gtl1-1 mutant and wild type controls
Adjusted p-valueLog2-fold change
1.2161 × 10-2-1.2
AT2G36100'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.766 × 10-21.2
AT2G36100'120 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
8.6642 × 10-22-1.1
AT2G36100'wounding' at '12 hour' vs 'none' at '0 hour'injury, timeTranscriptional response to wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
2.5237 × 10-12-1.1
AT2G36100'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'none' at '0 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
1.1557 × 10-9-1.1
AT2G36100'atphb3 ANAC017' vs 'wild type'age, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants that are defective in mitochondrial proteins
Adjusted p-valueLog2-fold change
5.8176 × 10-81.1
AT2G36100'xrn3-8 mutant' vs 'wild type genotype' in 'total RNA depleted for ribosomal RNA'fraction, genotype, protocolDirect RNA Sequencing of polyadenylated RNA & high-depth Illumina strand-specific, short read RNA-seq of a stably RNAi-silenced nuclear 5'-3' exonuclease XRN3 mutant line in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.6765 × 10-7-1.1
AT2G36100'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '1 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
1.6854 × 10-6-1.1
AT2G36100'rpotmp ANAC017' vs 'wild type'age, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants that are defective in mitochondrial proteins
Adjusted p-valueLog2-fold change
3.4846 × 10-4-1.1
AT2G36100'dehydration stress' vs 'control' in 'srk2dei triple mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
4.6315 × 10-41.1
AT2G36100'sucrose; 1 percent' vs 'none' in 'RBRcs mutant'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
7.5743 × 10-4-1.1
AT2G36100'trasngenic REVOLUTA fused to GR domain' vs 'wild type genotype' in 'Collection day one' at '0 minute'block, genotype, timeExpression data from Arabidopsis GR-REVOLUTA and KANADI1-GR transgenic seedlings
Adjusted p-valueLog2-fold change
1.2624 × 10-31.1
AT2G36100'hyl1 loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
4.079 × 10-21.1
AT2G36100'arf7 arf19 double mutant' vs 'wild type' in 'Root Early Elongation Zone'genotype, organism partTranscription profiling by array of different organism parts of Arabidopsis mutant for arf7 and arf19
Adjusted p-valueLog2-fold change
8.6654 × 10-81
AT2G36100'short Poly(A)-tail; paps1-1' vs 'short Poly(A)-tail; wild type'RNA, genotypeGenome-wide analysis of PAPS1-dependent polyadenylation identifies novel roles for functionally specialized poly(A) polymerases in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.904 × 10-71
AT2G36100'vtc2.5 mutant' vs 'wild type genotype' in 'normal watering'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.9816 × 10-7-1
AT2G36100'top3A-2' vs 'wild type genotype'genotypeTranscriptome analysis of top3A-2 complementation lines in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.3832 × 10-71
AT2G36100'trichostatin; 1 micromolar' vs 'none' in 'pUBI10::mCherry-GR-linker-WUS'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
3.7125 × 10-51
AT2G36100'prmt5 mutant' vs 'wild type'genotypeGenome-wide analysis of the prmt5 and prmt4a;4b mutant transcriptomes
Adjusted p-valueLog2-fold change
1.4427 × 10-31
AT2G36100'ahk2ahk3' vs 'wild type' in '1 degree celsius'genotype, temperatureTranscription profiling by array of genes regulated by ahk2 ahk3 in response to cold in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.8571 × 10-3-1
AT2G36100'50 micromolar antimycin A' vs 'none'treatmentExpression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue
Adjusted p-valueLog2-fold change
8.2547 × 10-31
AT2G36100'dorn1-1 mutant' vs 'wild type' in '100 micromolar ATP'genotype, growth conditionATP effect on Arabidopsis roots
Adjusted p-valueLog2-fold change
1.0072 × 10-2-1
AT2G36100'oas-a1.1' vs 'wild type' in 'CdCl2-treated root' at '18 hour'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis mutant for oas-a1 after treatment with cadmium chloride
Adjusted p-valueLog2-fold change
1.5085 × 10-21
AT2G36100'tor mutant' vs 'wild type' in 'glucose; 15 micromolar'compound, genotypeTranscription profiling by array of Arabidopsis estradiol inducible RNAi-tor seedlings treated with glucose
Adjusted p-valueLog2-fold change
1.8621 × 10-2-1
AT2G36100'0.125 mM gold for 24 hours' vs 'untreated control'growth conditionTranscription profiling by array of roots of hydroponically grown Arabidopsis treated with 0.125 mM gold against untreated control to study the uptake of gold
Adjusted p-valueLog2-fold change
1.9012 × 10-2-1
AT2G36100'sodium nitroprusside' vs 'none'compoundExpression data from Arabidopsis thaliana treated with NO donor SNP, compared to NO depletion by cPTIO