5.8 | | AT2G38800 | '15 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
-5 | | AT2G38800 | 'tcx2; CYCD6:GFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
-4.7 | | AT2G38800 | 'WER::GFP' vs 'wild type genotype' | genotype | Diversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset |
3.9 | | AT2G38800 | '13 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
-3.8 | | AT2G38800 | 'rhd6 WER::GFP' vs 'wild type genotype' | genotype | Diversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset |
3.6 | | AT2G38800 | '120 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
3.3 | | AT2G38800 | 'GID1b over expression in sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light' | environmental history, genotype, sampling time point | Transcriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b |
-3.3 | | AT2G38800 | 'tcx2; FEZ:FEZ-GFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
3.2 | | AT2G38800 | 'drought environment' vs 'normal watering' in 'vtc2.5 mutant' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
3.2 | | AT2G38800 | '12 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
3.2 | | AT2G38800 | 'sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light' | environmental history, genotype, sampling time point | Transcriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b |
3.2 | | AT2G38800 | '480 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
3.1 | | AT2G38800 | '10 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
-3.1 | | AT2G38800 | 'COBL9::GFP' vs 'wild type genotype' | genotype | Diversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset |
-3 | | AT2G38800 | 'seed germinating in continuous light 6 h SL' vs 'seed germinating in continuous light 1 h SL' | growth condition | Transcription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination |
2.8 | | AT2G38800 | 'drought environment' vs 'normal watering' in 'vtc2 mutant' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
2.8 | | AT2G38800 | 'drought environment' vs 'normal watering' in 'wild type genotype' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
2.7 | | AT2G38800 | 'bzr1-1D;bri1-116 double mutant' vs 'bri1-116 null mutant' | genotype | Transcription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only |
-2.7 | | AT2G38800 | 'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
-2.6 | | AT2G38800 | 'AtGATA2ox transgenic' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing AtGATA2 or mutant for bri1 |
-2.5 | | AT2G38800 | 'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '8 hour' | phenotype, time | Transcription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response |
2.5 | | AT2G38800 | '240 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
-2.4 | | AT2G38800 | 'cycloheximide, dexamethasone' vs 'mock' | treatment | Transcription profiling of Arabidopsis WUSCHEL targets |
2.4 | | AT2G38800 | 'oxt6:AtCPSF30' vs 'wild type' | genotype | A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana |
-2.3 | | AT2G38800 | 'cycloheximide' vs 'control' | treatment | Transcription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts |
-2.3 | | AT2G38800 | 'csn3-1 mutant' vs 'wild type' in 'dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
2.2 | | AT2G38800 | 'NaCl' vs 'control' in 'epidermal and lateral root cap cells' | cell type, growth condition | Transcription profiling by array of Arabidopsis root cells after treatment with NaCl |
2.2 | | AT2G38800 | 'NaCl' vs 'control' in 'stele cells' | cell type, growth condition | Transcription profiling by array of Arabidopsis root cells after treatment with NaCl |
2.1 | | AT2G38800 | 'Ler/Kas-2 hybrid' vs 'Kas-2' in 'wild type genotype' | ecotype, genotype | RNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL) |
-2.1 | | AT2G38800 | 'dexamethasone and cycloheximide' vs 'control' | treatment | Transcription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts |
-2.1 | | AT2G38800 | 'csn4-1 mutant' vs 'wild type' in 'dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
-2.1 | | AT2G38800 | 'cs26 mutant' vs 'wild type' in 'long day photoperiod' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods |
2.1 | | AT2G38800 | 'wild type; Pseudomonas syringae pv. tomato DC3000' vs 'wild type; none' | genotype, infect | Transcription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000 |
2.1 | | AT2G38800 | '240 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
2 | | AT2G38800 | 'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-1 mutant' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2 |
2 | | AT2G38800 | 'bzr1-1D;bri1-116 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only |
2 | | AT2G38800 | 'syringolin; 20 micromolar' vs 'none' in 'uninfected' at '8 to 12 hour' | compound, growth condition, time | Transcription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A |
1.9 | | AT2G38800 | 'seed germinating in continuous light 48 h SL' vs 'seed germinating in continuous light 24 h SL' | growth condition | Transcription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination |
-1.9 | | AT2G38800 | 'protoplasting' vs 'control' | treatment | Transcription profiling by array of Arabidopsis protoplasted root cells after iron deprivation |
-1.9 | | AT2G38800 | 'tcx2; WOX5:GFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
1.9 | | AT2G38800 | 'empty pRR2222 vector; dark' vs 'empty pRR2222 vector; light' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions |
-1.9 | | AT2G38800 | 'rrd2 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis temperature-dependent later root fasciation mutants |
1.8 | | AT2G38800 | 'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-2 mutant' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2 |
-1.8 | | AT2G38800 | 'agl15-4; agl18-1 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for agl15 and agl18 or overexpressing AGL15 during somatic embryogenesis |
1.8 | | AT2G38800 | 'paclobutrazol; 20 micromolar' vs 'none' in 'endosperm' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
-1.8 | | AT2G38800 | 'mkk1 knockout; none' vs 'wild_type; none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH |
1.8 | | AT2G38800 | 'seu-3 ant-1 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for ant1 and seu3 |
1.8 | | AT2G38800 | 'seu-3 ant-1 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for seuss and/or aintegumenta |
1.8 | | AT2G38800 | 'drought; wild type' at '0 hour' vs 'control; wild type' at '0 hour' | environmental stress, genotype, time | Transcription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling |
-1.8 | | AT2G38800 | '4 degree celsius' vs '20 degree celsius' in 'Columbia-0' | ecotype, temperature | Transcription profiling by array of nine ecotypes of Arabidopsis before and after cold acclimation |
1.7 | | AT2G38800 | '2 hour; excess light' vs '0 hour; low light' in 'hsfa1dhsfa2hsfa3 mutant' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
-1.7 | | AT2G38800 | 'cycloheximide (60 micromolar) and dexamethasone (60 micromolar)' vs 'dimethyl sulfoxide; 60 micromolar' | compound | Transcription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes |
-1.7 | | AT2G38800 | 'abi3-6 mutant' vs 'wild type' in '16 day' | age, genotype | Gene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 2] |
-1.6 | | AT2G38800 | 'Sei-0 x Col F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
-1.6 | | AT2G38800 | 'pft1-1; 16 degree celsius' vs 'pft1-1; 23 degree celsius' | genotype, temperature | PFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis |
1.5 | | AT2G38800 | 'arf6-2, arf8-3 double mutant' vs 'wild type' at 'flowering stage' | developmental stage, genotype | Transcription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant |
-1.5 | | AT2G38800 | 'val1 mutant' vs 'wild type' at '13 days after pollination' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
-1.5 | | AT2G38800 | '5-aza-2-deoxycytidine 20 milligram per liter' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ddm1 |
1.5 | | AT2G38800 | '60 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
-1.5 | | AT2G38800 | 'trichostatin A 2.5 milligram per liter' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ddm1 |
-1.5 | | AT2G38800 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; leaf' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
1.5 | | AT2G38800 | 'oxt6 mutant' vs 'wild type' | genotype | A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana |
-1.5 | | AT2G38800 | 'mkk2 knockout; none' vs 'wild_type; none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH |
-1.4 | | AT2G38800 | 'pif quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen' | genotype, growth condition | Transcription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours |
-1.4 | | AT2G38800 | 'silver(1+) nitrate, 10 micromolar; N-benzyladenine, 3 micromolar' vs 'silver(1+) nitrate, 10 micromolar' | stimulus | Ethylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway. |
-1.4 | | AT2G38800 | 'pkl mutant; uniconazole' vs 'pkl mutant; no compound' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for pickle after treatment with uniconazole |
1.4 | | AT2G38800 | 'water; des1' vs 'water; wild type' | compound, genotype | Exogenous Sulfide Reverses the Alteration of Transcriptional Profiling of the des1-1 Mutant (Arabidopsis thaliana) |
1.4 | | AT2G38800 | 'low light; wild type' vs 'control; wild type' | environmental stress, genotype | Transcription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light |
-1.4 | | AT2G38800 | 'sodium chloride; 50 millimolar; atpao5-3 mutant' vs 'none; ; atpao5-3 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis wild type and polyamine oxidase 5 loss-of-function mutant exposed to sodium chloride |
1.4 | | AT2G38800 | 'ga1-3 mutant' vs 'wild type' in 'seed' | genotype, organism part | Transcription profiling of Arabidopsis seed and flowers of ga1-3 mutant |
1.4 | | AT2G38800 | 'catalase2 mutant' vs 'wild type; transferred to air for 2 days in short day length regime' | genotype, growth condition | Transcription profiling by array of Arabidopsis catalase 2 mutant in response to CO2 level and photoperiod |
-1.3 | | AT2G38800 | '24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei K1; avirulent' | infect, phenotype, time | Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant. |
-1.3 | | AT2G38800 | 'cycloheximide' vs 'mock' | treatment | Transcription profiling of Arabidopsis WUSCHEL targets |
1.3 | | AT2G38800 | 'KZ-10 x Mrk-0' vs 'Mrk-0' | ecotype | Transcription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents |
-1.3 | | AT2G38800 | 'cycloheximide' vs 'dimethyl sulfoxide' in '60 micromolar' | compound | Transcription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes |
1.3 | | AT2G38800 | 'Pseudomonas syringae pv. tomato' vs 'none' in 'ulp1c/ulp1d double mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a |
1.3 | | AT2G38800 | '2 hour; excess light' vs '0 hour; low light' in 'wild type' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
-1.3 | | AT2G38800 | '2 hr hypoxia' vs '2 hr control' in 'polysomal mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
-1.3 | | AT2G38800 | 'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
1.3 | | AT2G38800 | 'arf6-2, arf8-3 double mutant' vs 'wild type' at 'petal differentiation and expansion stage' | developmental stage, genotype | Transcription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant |
1.3 | | AT2G38800 | 'syringolin; 20 micromolar' vs 'none' in 'powdery mildew infected' at '8 to 12 hour' | compound, growth condition, time | Transcription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A |
1.3 | | AT2G38800 | '120 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
1.3 | | AT2G38800 | 'water deprivation' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after water deprivation |
1.3 | | AT2G38800 | 'abscisic acid; 20 micromolar' vs 'none' in 'endosperm' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
1.3 | | AT2G38800 | 'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; root' | genotype, growth condition, organism part | Transcription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation |
-1.2 | | AT2G38800 | 'Sei-0 x Col-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
-1.2 | | AT2G38800 | 'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
-1.2 | | AT2G38800 | '3% glucose' at '4 hour' vs 'control' at '0 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid |
1.2 | | AT2G38800 | 'Pseudomonas syringae ES4326' vs 'none' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326 |
-1.2 | | AT2G38800 | 'Meloidogyne incognita infested region' vs 'Meloidogyne incognita non-infested region' at '14 day' | sampling site, time | Transcription profiling by array of Arabidopsis root cells infested with Meloidogyne incognita 14 or 21 days after inoculation |
1.2 | | AT2G38800 | 'spch' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings |
1.2 | | AT2G38800 | 'sulfometuron methyl' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after treatment with sulfometuron methyl herbicide |
1.2 | | AT2G38800 | 'dcl1-15 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis wild-type and dcl1-15 torpedo-staged embryos |
-1.2 | | AT2G38800 | 'photoperiod induced flowering at 22 hours' vs 'control at 22 hours' | growth condition, sampling time point | Transcription profiling by array of Arabidopsis thaliana roots following the photoperiodic induction of flowering |
1.2 | | AT2G38800 | 'drought; abi1td' at '0 hour' vs 'control; abi1td' at '0 hour' | environmental stress, genotype, time | Transcription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling |
1.1 | | AT2G38800 | 'salt and heat stress' vs 'none' | environmental stress | Transcription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress |
-1.1 | | AT2G38800 | 'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'none' | compound, genotype | WUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq] |
-1.1 | | AT2G38800 | 'sulki1-8 mutant' vs 'wild type genotype' in 'Ler/Kas-2 hybrid' | ecotype, genotype | RNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL) |
-1.1 | | AT2G38800 | 'ANAC017 OEa' vs 'wild type genotype' at '3 day' | genotype, time | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
1.1 | | AT2G38800 | ''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 10 hour' vs 'none; 0 hour' in 'wild type genotype' | genotype, infect, time | Expression profiling of Col-0 and rps2 treated with Psm:AvrRpt2 |
1.1 | | AT2G38800 | 'KZ-10 x Mrk-0' vs 'KZ-10' | ecotype | Transcription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents |
-1.1 | | AT2G38800 | '9 hr hypoxia' vs '9 hr control' in 'polysomal mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
-1.1 | | AT2G38800 | '1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '3 hour' | time, treatment | Transcription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening) |
1.1 | | AT2G38800 | 'low light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)' | environmental stress, genotype | Transcription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light |
-1.1 | | AT2G38800 | 'photoperiod induced flowering at 16 hours' vs 'control at 16 hours' | growth condition, sampling time point | Transcription profiling by array of Arabidopsis thaliana roots following the photoperiodic induction of flowering |
-1.1 | | AT2G38800 | '1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '0 hour' | time, treatment | Transcription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening) |
-1.1 | | AT2G38800 | 'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'spx1,spx2 double mutant' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
-1.1 | | AT2G38800 | 'phosphate deprivation' vs 'control' in 'wild type genotype; root' | genotype, growth condition, organism part | Transcription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation |
1.1 | | AT2G38800 | 'pab2 pab8; total RNA' vs 'wild type; total RNA' | RNA, genotype | PAB/WT polysome loading and transcript levels (Arabidopsis thaliana) |
1.1 | | AT2G38800 | 'salicylic acid' vs 'Silwet' at time: '4 hours' in ecotype: 'Col-0' | growth condition, time, ecotype | Transcription profiling by array of seven ecotypes of Arabidopsis thaliana after time course treatment with salicylic acid. |
-1 | | AT2G38800 | '1 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
-1 | | AT2G38800 | 'det1-1 mutant' vs 'wild type' in 'continuous dark (no light) regimen' | genotype, growth condition | Transcription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours |
1 | | AT2G38800 | '42 day' vs '29 day' | age | RNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence |
-1 | | AT2G38800 | 'Blumeria graminis f. sp. hordei K1; avirulent; 18 hour' vs 'none; wild type phenotype; 18 hour' | infect, phenotype, time | Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant. |
1 | | AT2G38800 | 'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day' | genotype, time | Transcription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture. |
1 | | AT2G38800 | 'wild_type; uniconazole' vs 'wild_type; no compound' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for pickle after treatment with uniconazole |
-1 | | AT2G38800 | 'sodium sulfide; des1' vs 'water; des1' | compound, genotype | Exogenous Sulfide Reverses the Alteration of Transcriptional Profiling of the des1-1 Mutant (Arabidopsis thaliana) |
-1 | | AT2G38800 | 'auxin' vs 'none' in '35 day' | age, growth condition | Transcription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin |
1 | | AT2G38800 | 'epcr1-/-; epcr2-/-' vs 'wild type genotype' | genotype | The PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq] |
-1 | | AT2G38800 | 'Sclerotinia sclerotiorum' vs 'none' in 'coi1-2 mutant' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
-1 | | AT2G38800 | 'fus3-3 mutant' vs 'wild type' in '12 day; Col-0' | age, ecotype, genotype | Gene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1] |
1 | | AT2G38800 | 'antimycin A; 50 micromolar; wild type' vs 'water; wild type' | compound, genotype | Transcription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals |
-1 | | AT2G38800 | 'iron; 100 micromolar' vs 'none' in 'bhlh100/101 double mutant; root' | compound, genotype, organism part | Expression data from Arabidopsis roots and shoots grown with or without iron |
1 | | AT2G38800 | 'hmr-5 null mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis hemera null (hmr-5) and weak-allele (hmr-22) photomorphogenetic mutants against wild-type controls grown under red light |
-1 | | AT2G38800 | 'spx1,spx2 double mutant' vs 'wild type' in 'phosphate-lacking medium and resupplied with Pi for 4 h' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
-1 | | AT2G38800 | 'Meloidogyne incognita infested region' vs 'Meloidogyne incognita non-infested region' at '21 day' | sampling site, time | Transcription profiling by array of Arabidopsis root cells infested with Meloidogyne incognita 14 or 21 days after inoculation |
-1 | | AT2G38800 | 'ANAC017 OEb' vs 'wild type genotype' at '3 day' | genotype, time | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
1 | | AT2G38800 | 'NaCl' vs 'control' in 'cortex cells' | cell type, growth condition | Transcription profiling by array of Arabidopsis root cells after treatment with NaCl |
1 | | AT2G38800 | 'AFB1 overexpression; Pseudomonas syringae pv. tomato DC3000' vs 'AFB1 overexpression; none' | genotype, infect | Transcription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000 |
-1 | | AT2G38800 | 'chitin' vs 'none' in 'wild type' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin |
1 | | AT2G38800 | 'Phytophthora infestans' vs 'none' in 'erp2 mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-1 | | AT2G38800 | 'low pH (pH 4.6)' vs 'standard pH (pH 5.7)' in 'root cortex' | growth condition, organism part | Transcription profiling by array of Arabidopsis root cells after growth in low pH conditions |