AT2G38800

arabidopsis thaliana

Plant calmodulin-binding protein-like protein

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Arabidopsis thaliana
Organism part
Showing 41 experiments:
image/svg+xml leaf root flower fruit
Created with Highcharts 6.2.0adult vascular leafcarpelcauline leafcotyledonflowerflower pedicelfruitfruit septumfruit valvehypocotylleafmixed shoot apical meristem, cotyledon and first leavespetalpetioleplant calluspollenrootroot tiprosette leafseedsepalsiliquestamenstem internodestem node
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
6.0015 × 10-305.8
AT2G38800'15 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
1.2367 × 10-6-5
AT2G38800'tcx2; CYCD6:GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
6.2958 × 10-26-4.7
AT2G38800'WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
1.2557 × 10-123.9
AT2G38800'13 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
3.3522 × 10-4-3.8
AT2G38800'rhd6 WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
5.6753 × 10-73.6
AT2G38800'120 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
4.1037 × 10-83.3
AT2G38800'GID1b over expression in sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
2.1701 × 10-7-3.3
AT2G38800'tcx2; FEZ:FEZ-GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
9.2713 × 10-2223.2
AT2G38800'drought environment' vs 'normal watering' in 'vtc2.5 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.0075 × 10-83.2
AT2G38800'12 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
1.2112 × 10-83.2
AT2G38800'sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
1.5047 × 10-33.2
AT2G38800'480 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
4.3839 × 10-103.1
AT2G38800'10 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
1.1681 × 10-5-3.1
AT2G38800'COBL9::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
3.006 × 10-9-3
AT2G38800'seed germinating in continuous light 6 h SL' vs 'seed germinating in continuous light 1 h SL'growth conditionTranscription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination
Adjusted p-valueLog2-fold change
3.5128 × 10-1152.8
AT2G38800'drought environment' vs 'normal watering' in 'vtc2 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.3232 × 10-552.8
AT2G38800'drought environment' vs 'normal watering' in 'wild type genotype'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.7267 × 10-72.7
AT2G38800'bzr1-1D;bri1-116 double mutant' vs 'bri1-116 null mutant'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
7.0354 × 10-6-2.7
AT2G38800'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
7.3593 × 10-5-2.6
AT2G38800'AtGATA2ox transgenic' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing AtGATA2 or mutant for bri1
Adjusted p-valueLog2-fold change
2.3336 × 10-8-2.5
AT2G38800'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '8 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
1.9633 × 10-22.5
AT2G38800'240 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
5.8442 × 10-8-2.4
AT2G38800'cycloheximide, dexamethasone' vs 'mock'treatmentTranscription profiling of Arabidopsis WUSCHEL targets
Adjusted p-valueLog2-fold change
8.7874 × 10-52.4
AT2G38800'oxt6:AtCPSF30' vs 'wild type'genotypeA polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.2421 × 10-6-2.3
AT2G38800'cycloheximide' vs 'control'treatmentTranscription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts
Adjusted p-valueLog2-fold change
1.0363 × 10-4-2.3
AT2G38800'csn3-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
5.4445 × 10-52.2
AT2G38800'NaCl' vs 'control' in 'epidermal and lateral root cap cells'cell type, growth conditionTranscription profiling by array of Arabidopsis root cells after treatment with NaCl
Adjusted p-valueLog2-fold change
1.3338 × 10-22.2
AT2G38800'NaCl' vs 'control' in 'stele cells'cell type, growth conditionTranscription profiling by array of Arabidopsis root cells after treatment with NaCl
Adjusted p-valueLog2-fold change
6.7197 × 10-72.1
AT2G38800'Ler/Kas-2 hybrid' vs 'Kas-2' in 'wild type genotype'ecotype, genotypeRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Adjusted p-valueLog2-fold change
2.2391 × 10-5-2.1
AT2G38800'dexamethasone and cycloheximide' vs 'control'treatmentTranscription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts
Adjusted p-valueLog2-fold change
8.0353 × 10-5-2.1
AT2G38800'csn4-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
8.7396 × 10-4-2.1
AT2G38800'cs26 mutant' vs 'wild type' in 'long day photoperiod'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods
Adjusted p-valueLog2-fold change
3.1799 × 10-32.1
AT2G38800'wild type; Pseudomonas syringae pv. tomato DC3000' vs 'wild type; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
2.6648 × 10-22.1
AT2G38800'240 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
2.4285 × 10-82
AT2G38800'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-1 mutant'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
9.5321 × 10-62
AT2G38800'bzr1-1D;bri1-116 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
2.8219 × 10-52
AT2G38800'syringolin; 20 micromolar' vs 'none' in 'uninfected' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
1.2079 × 10-81.9
AT2G38800'seed germinating in continuous light 48 h SL' vs 'seed germinating in continuous light 24 h SL'growth conditionTranscription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination
Adjusted p-valueLog2-fold change
6.3681 × 10-4-1.9
AT2G38800'protoplasting' vs 'control'treatmentTranscription profiling by array of Arabidopsis protoplasted root cells after iron deprivation
Adjusted p-valueLog2-fold change
6.3918 × 10-4-1.9
AT2G38800'tcx2; WOX5:GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
2.6313 × 10-31.9
AT2G38800'empty pRR2222 vector; dark' vs 'empty pRR2222 vector; light'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
2.6315 × 10-3-1.9
AT2G38800'rrd2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis temperature-dependent later root fasciation mutants
Adjusted p-valueLog2-fold change
7.5046 × 10-61.8
AT2G38800'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-2 mutant'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
1.9137 × 10-4-1.8
AT2G38800'agl15-4; agl18-1 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for agl15 and agl18 or overexpressing AGL15 during somatic embryogenesis
Adjusted p-valueLog2-fold change
2.8106 × 10-31.8
AT2G38800'paclobutrazol; 20 micromolar' vs 'none' in 'endosperm'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
3.105 × 10-3-1.8
AT2G38800'mkk1 knockout; none' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
4.0458 × 10-31.8
AT2G38800'seu-3 ant-1 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for ant1 and seu3
Adjusted p-valueLog2-fold change
4.0458 × 10-31.8
AT2G38800'seu-3 ant-1 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for seuss and/or aintegumenta
Adjusted p-valueLog2-fold change
1.8834 × 10-21.8
AT2G38800'drought; wild type' at '0 hour' vs 'control; wild type' at '0 hour'environmental stress, genotype, timeTranscription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling
Adjusted p-valueLog2-fold change
3.2841 × 10-2-1.8
AT2G38800'4 degree celsius' vs '20 degree celsius' in 'Columbia-0'ecotype, temperatureTranscription profiling by array of nine ecotypes of Arabidopsis before and after cold acclimation
Adjusted p-valueLog2-fold change
4.3366 × 10-61.7
AT2G38800'2 hour; excess light' vs '0 hour; low light' in 'hsfa1dhsfa2hsfa3 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
5.3783 × 10-6-1.7
AT2G38800'cycloheximide (60 micromolar) and dexamethasone (60 micromolar)' vs 'dimethyl sulfoxide; 60 micromolar'compoundTranscription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes
Adjusted p-valueLog2-fold change
8.4809 × 10-5-1.7
AT2G38800'abi3-6 mutant' vs 'wild type' in '16 day'age, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 2]
Adjusted p-valueLog2-fold change
6.9405 × 10-28-1.6
AT2G38800'Sei-0 x Col F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.1161 × 10-3-1.6
AT2G38800'pft1-1; 16 degree celsius' vs 'pft1-1; 23 degree celsius'genotype, temperaturePFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis
Adjusted p-valueLog2-fold change
7.5703 × 10-51.5
AT2G38800'arf6-2, arf8-3 double mutant' vs 'wild type' at 'flowering stage'developmental stage, genotypeTranscription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant
Adjusted p-valueLog2-fold change
3.0808 × 10-4-1.5
AT2G38800'val1 mutant' vs 'wild type' at '13 days after pollination'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
3.6859 × 10-4-1.5
AT2G38800'5-aza-2-deoxycytidine 20 milligram per liter' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ddm1
Adjusted p-valueLog2-fold change
1.1794 × 10-31.5
AT2G38800'60 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
2.4014 × 10-3-1.5
AT2G38800'trichostatin A 2.5 milligram per liter' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ddm1
Adjusted p-valueLog2-fold change
3.2214 × 10-3-1.5
AT2G38800'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
7.8709 × 10-31.5
AT2G38800'oxt6 mutant' vs 'wild type'genotypeA polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.6831 × 10-2-1.5
AT2G38800'mkk2 knockout; none' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
9.227 × 10-40-1.4
AT2G38800'pif quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
2.1134 × 10-32-1.4
AT2G38800'silver(1+) nitrate, 10 micromolar; N-benzyladenine, 3 micromolar' vs 'silver(1+) nitrate, 10 micromolar'stimulusEthylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway.
Adjusted p-valueLog2-fold change
1.1145 × 10-10-1.4
AT2G38800'pkl mutant; uniconazole' vs 'pkl mutant; no compound'compound, genotypeTranscription profiling by array of Arabidopsis mutant for pickle after treatment with uniconazole
Adjusted p-valueLog2-fold change
9.8116 × 10-81.4
AT2G38800'water; des1' vs 'water; wild type'compound, genotypeExogenous Sulfide Reverses the Alteration of Transcriptional Profiling of the des1-1 Mutant (Arabidopsis thaliana)
Adjusted p-valueLog2-fold change
1.8726 × 10-51.4
AT2G38800'low light; wild type' vs 'control; wild type'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
2.6072 × 10-5-1.4
AT2G38800'sodium chloride; 50 millimolar; atpao5-3 mutant' vs 'none; ; atpao5-3 mutant'compound, genotypeTranscription profiling by array of Arabidopsis wild type and polyamine oxidase 5 loss-of-function mutant exposed to sodium chloride
Adjusted p-valueLog2-fold change
2.4899 × 10-31.4
AT2G38800'ga1-3 mutant' vs 'wild type' in 'seed'genotype, organism partTranscription profiling of Arabidopsis seed and flowers of ga1-3 mutant
Adjusted p-valueLog2-fold change
1.0669 × 10-21.4
AT2G38800'catalase2 mutant' vs 'wild type; transferred to air for 2 days in short day length regime'genotype, growth conditionTranscription profiling by array of Arabidopsis catalase 2 mutant in response to CO2 level and photoperiod
Adjusted p-valueLog2-fold change
9.012 × 10-12-1.3
AT2G38800'24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei K1; avirulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
4.7457 × 10-6-1.3
AT2G38800'cycloheximide' vs 'mock'treatmentTranscription profiling of Arabidopsis WUSCHEL targets
Adjusted p-valueLog2-fold change
6.8382 × 10-61.3
AT2G38800'KZ-10 x Mrk-0' vs 'Mrk-0'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
1.6055 × 10-5-1.3
AT2G38800'cycloheximide' vs 'dimethyl sulfoxide' in '60 micromolar'compoundTranscription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes
Adjusted p-valueLog2-fold change
5.1121 × 10-51.3
AT2G38800'Pseudomonas syringae pv. tomato' vs 'none' in 'ulp1c/ulp1d double mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
1.0821 × 10-41.3
AT2G38800'2 hour; excess light' vs '0 hour; low light' in 'wild type'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
4.2668 × 10-4-1.3
AT2G38800'2 hr hypoxia' vs '2 hr control' in 'polysomal mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
5.4489 × 10-4-1.3
AT2G38800'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
1.5071 × 10-31.3
AT2G38800'arf6-2, arf8-3 double mutant' vs 'wild type' at 'petal differentiation and expansion stage'developmental stage, genotypeTranscription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant
Adjusted p-valueLog2-fold change
2.5296 × 10-31.3
AT2G38800'syringolin; 20 micromolar' vs 'none' in 'powdery mildew infected' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
3.8462 × 10-31.3
AT2G38800'120 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
8.1919 × 10-31.3
AT2G38800'water deprivation' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after water deprivation
Adjusted p-valueLog2-fold change
1.2246 × 10-21.3
AT2G38800'abscisic acid; 20 micromolar' vs 'none' in 'endosperm'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
1.8014 × 10-21.3
AT2G38800'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; root'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
1.2071 × 10-17-1.2
AT2G38800'Sei-0 x Col-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
4.0278 × 10-14-1.2
AT2G38800'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.5086 × 10-5-1.2
AT2G38800'3% glucose' at '4 hour' vs 'control' at '0 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid
Adjusted p-valueLog2-fold change
1.1286 × 10-41.2
AT2G38800'Pseudomonas syringae ES4326' vs 'none' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
1.2147 × 10-3-1.2
AT2G38800'Meloidogyne incognita infested region' vs 'Meloidogyne incognita non-infested region' at '14 day'sampling site, timeTranscription profiling by array of Arabidopsis root cells infested with Meloidogyne incognita 14 or 21 days after inoculation
Adjusted p-valueLog2-fold change
1.4102 × 10-31.2
AT2G38800'spch' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings
Adjusted p-valueLog2-fold change
2.0113 × 10-31.2
AT2G38800'sulfometuron methyl' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after treatment with sulfometuron methyl herbicide
Adjusted p-valueLog2-fold change
8.2903 × 10-31.2
AT2G38800'dcl1-15 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis wild-type and dcl1-15 torpedo-staged embryos
Adjusted p-valueLog2-fold change
1.7752 × 10-2-1.2
AT2G38800'photoperiod induced flowering at 22 hours' vs 'control at 22 hours'growth condition, sampling time pointTranscription profiling by array of Arabidopsis thaliana roots following the photoperiodic induction of flowering
Adjusted p-valueLog2-fold change
3.7678 × 10-21.2
AT2G38800'drought; abi1td' at '0 hour' vs 'control; abi1td' at '0 hour'environmental stress, genotype, timeTranscription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling
Adjusted p-valueLog2-fold change
3.8778 × 10-391.1
AT2G38800'salt and heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
2.051 × 10-24-1.1
AT2G38800'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'none'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
2.2322 × 10-10-1.1
AT2G38800'sulki1-8 mutant' vs 'wild type genotype' in 'Ler/Kas-2 hybrid'ecotype, genotypeRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Adjusted p-valueLog2-fold change
1.2841 × 10-9-1.1
AT2G38800'ANAC017 OEa' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
8.2288 × 10-71.1
AT2G38800''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 10 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
1.2389 × 10-51.1
AT2G38800'KZ-10 x Mrk-0' vs 'KZ-10'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
5.1302 × 10-5-1.1
AT2G38800'9 hr hypoxia' vs '9 hr control' in 'polysomal mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
9.7998 × 10-5-1.1
AT2G38800'1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '3 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)
Adjusted p-valueLog2-fold change
1.6093 × 10-41.1
AT2G38800'low light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
1.3859 × 10-3-1.1
AT2G38800'photoperiod induced flowering at 16 hours' vs 'control at 16 hours'growth condition, sampling time pointTranscription profiling by array of Arabidopsis thaliana roots following the photoperiodic induction of flowering
Adjusted p-valueLog2-fold change
1.9142 × 10-3-1.1
AT2G38800'1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '0 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)
Adjusted p-valueLog2-fold change
8.1951 × 10-3-1.1
AT2G38800'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'spx1,spx2 double mutant'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
8.8769 × 10-3-1.1
AT2G38800'phosphate deprivation' vs 'control' in 'wild type genotype; root'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
1.5175 × 10-21.1
AT2G38800'pab2 pab8; total RNA' vs 'wild type; total RNA'RNA, genotypePAB/WT polysome loading and transcript levels (Arabidopsis thaliana)
Adjusted p-valueLog2-fold change
2.9278 × 10-21.1
AT2G38800'salicylic acid' vs 'Silwet' at time: '4 hours' in ecotype: 'Col-0'growth condition, time, ecotypeTranscription profiling by array of seven ecotypes of Arabidopsis thaliana after time course treatment with salicylic acid.
Adjusted p-valueLog2-fold change
1.6612 × 10-33-1
AT2G38800'1 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
7.4757 × 10-21-1
AT2G38800'det1-1 mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
2.3947 × 10-131
AT2G38800'42 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
3.3048 × 10-7-1
AT2G38800'Blumeria graminis f. sp. hordei K1; avirulent; 18 hour' vs 'none; wild type phenotype; 18 hour'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.0788 × 10-61
AT2G38800'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
1.7819 × 10-61
AT2G38800'wild_type; uniconazole' vs 'wild_type; no compound'compound, genotypeTranscription profiling by array of Arabidopsis mutant for pickle after treatment with uniconazole
Adjusted p-valueLog2-fold change
1.903 × 10-6-1
AT2G38800'sodium sulfide; des1' vs 'water; des1'compound, genotypeExogenous Sulfide Reverses the Alteration of Transcriptional Profiling of the des1-1 Mutant (Arabidopsis thaliana)
Adjusted p-valueLog2-fold change
5.8837 × 10-6-1
AT2G38800'auxin' vs 'none' in '35 day'age, growth conditionTranscription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin
Adjusted p-valueLog2-fold change
4.8338 × 10-51
AT2G38800'epcr1-/-; epcr2-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
1.1539 × 10-4-1
AT2G38800'Sclerotinia sclerotiorum' vs 'none' in 'coi1-2 mutant' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
2.1196 × 10-4-1
AT2G38800'fus3-3 mutant' vs 'wild type' in '12 day; Col-0'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
6.1359 × 10-41
AT2G38800'antimycin A; 50 micromolar; wild type' vs 'water; wild type'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
7.3574 × 10-4-1
AT2G38800'iron; 100 micromolar' vs 'none' in 'bhlh100/101 double mutant; root'compound, genotype, organism partExpression data from Arabidopsis roots and shoots grown with or without iron
Adjusted p-valueLog2-fold change
1.2896 × 10-31
AT2G38800'hmr-5 null mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis hemera null (hmr-5) and weak-allele (hmr-22) photomorphogenetic mutants against wild-type controls grown under red light
Adjusted p-valueLog2-fold change
1.5688 × 10-3-1
AT2G38800'spx1,spx2 double mutant' vs 'wild type' in 'phosphate-lacking medium and resupplied with Pi for 4 h'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
2.8248 × 10-3-1
AT2G38800'Meloidogyne incognita infested region' vs 'Meloidogyne incognita non-infested region' at '21 day'sampling site, timeTranscription profiling by array of Arabidopsis root cells infested with Meloidogyne incognita 14 or 21 days after inoculation
Adjusted p-valueLog2-fold change
3.8732 × 10-3-1
AT2G38800'ANAC017 OEb' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
7.4771 × 10-31
AT2G38800'NaCl' vs 'control' in 'cortex cells'cell type, growth conditionTranscription profiling by array of Arabidopsis root cells after treatment with NaCl
Adjusted p-valueLog2-fold change
8.7937 × 10-31
AT2G38800'AFB1 overexpression; Pseudomonas syringae pv. tomato DC3000' vs 'AFB1 overexpression; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
2.1346 × 10-2-1
AT2G38800'chitin' vs 'none' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin
Adjusted p-valueLog2-fold change
2.2252 × 10-21
AT2G38800'Phytophthora infestans' vs 'none' in 'erp2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
3.4273 × 10-2-1
AT2G38800'low pH (pH 4.6)' vs 'standard pH (pH 5.7)' in 'root cortex'growth condition, organism partTranscription profiling by array of Arabidopsis root cells after growth in low pH conditions
Gene ontology
Plant ontology
InterPro
Ensembl gene
Ensembl transcript
Ensembl protein
Entrez
UniProt
Gene biotype
Design element
263296_at