6.6 | | AT2G39370 | 'auxin' vs 'none' in '7 day' | age, growth condition | Transcription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin |
5.6 | | AT2G39370 | 'auxin' vs 'none' in '35 day' | age, growth condition | Transcription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin |
-5.4 | | AT2G39370 | 'drought environment' vs 'normal watering' in 'vtc2.5 mutant' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
5.2 | | AT2G39370 | 'indole-3-acetic acid; 5 micromolar' vs 'none' in 'whole root' | compound, organism part | Transcription profiling by array of four distinct tissues of Arabidopsis root and whole root treated with (auxin) indole-3-acetic acid against mock-treated controls |
5.1 | | AT2G39370 | '120 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
4.9 | | AT2G39370 | '1 micromolar indole-3-acetic acid' vs 'none' | compound | Transcription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions |
-4.9 | | AT2G39370 | 'drought environment' vs 'normal watering' in 'wild type genotype' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
4.4 | | AT2G39370 | '3 percent glucose and 1 micromolar indole-3-acetic acid' vs 'none' | compound | Transcription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions |
-4.2 | | AT2G39370 | 'dexamethasone; 15 micromolar' vs 'none' | compound | RNA-seq to investigate Auxin responsive genes in the Arabidopsis stem |
4.2 | | AT2G39370 | 'indole-3-acetic acid; 5 micromolar' vs 'none' in 'pericycle' | compound, organism part | Transcription profiling by array of four distinct tissues of Arabidopsis root and whole root treated with (auxin) indole-3-acetic acid against mock-treated controls |
4.2 | | AT2G39370 | 'auxin' vs 'none' | compound | Transcription profiling of Arabidopsis plants treated with indole-3-acetic acid (IAA) or IAA plus dexamethasone |
4.1 | | AT2G39370 | 'indole-3-acetic acid' vs 'none' in 'wild type' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for nph4 or arf19 or both after treatment with indole-3-acetic acid |
4 | | AT2G39370 | 'indole-3-acetic acid' vs 'none' in 'arf19-1' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for nph4 or arf19 or both after treatment with indole-3-acetic acid |
3.8 | | AT2G39370 | '60 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
-3.6 | | AT2G39370 | 'silver(1+) nitrate, 10 micromolar; N-benzyladenine, 3 micromolar' vs 'silver(1+) nitrate, 10 micromolar' | stimulus | Ethylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway. |
-3.4 | | AT2G39370 | 'drought environment' vs 'normal watering' in 'vtc2 mutant' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
3.3 | | AT2G39370 | 'indole-3-acetic acid' vs 'none' | growth condition | Transcription profiling by array of Arabidopsis after treatment with inhibitors of auxin transcriptional activation |
3.1 | | AT2G39370 | '4.5 micromolar Naphtalenacetic acid and 50 micromolar antimycin A' vs 'none' | treatment | Expression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue |
3.1 | | AT2G39370 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Fei-0' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
3 | | AT2G39370 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Sha' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
3 | | AT2G39370 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Bur-0' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
2.9 | | AT2G39370 | 'indole-3-acetic acid; 5 micromolar' vs 'none' in 'stele' | compound, organism part | Transcription profiling by array of four distinct tissues of Arabidopsis root and whole root treated with (auxin) indole-3-acetic acid against mock-treated controls |
2.9 | | AT2G39370 | 'pMON999_mRFP control vector; indole-3-acetic acid' vs 'pMON999_mRFP control vector; none' | compound, genotype | Transcription profiling by array of Arabidopsis overexpressing IAA7mll or IAA19mll after treatment with indole-3-acetic acid |
2.8 | | AT2G39370 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'C24' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
2.8 | | AT2G39370 | '480 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
2.7 | | AT2G39370 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Col-0' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
2.7 | | AT2G39370 | 'dicamba; 7 millimolar' vs 'none' | compound | Transcription profiling by array of Arabidopsis after treatment with dicamba |
-2.7 | | AT2G39370 | 'indole-3-butyric acid; 10 micromolar; ibr1ibr3ibr10' vs 'indole-3-butyric acid; 10 micromolar; wild type' | compound, genotype | Expression data from Arabidopsis wild type and ibr1 ibr3 ibr10 triple mutant seedlings root tip segments treated with indole-3-butyric acid (IBA) |
2.6 | | AT2G39370 | 'auxin and dexamethasone' vs 'none' | compound | Transcription profiling of Arabidopsis plants treated with indole-3-acetic acid (IAA) or IAA plus dexamethasone |
2.5 | | AT2G39370 | '4.5 micromolar Naphtalenacetic acid' vs 'none' | treatment | Expression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue |
2.5 | | AT2G39370 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Bay-0' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
2.5 | | AT2G39370 | '240 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
2.4 | | AT2G39370 | 'indole-3-acetic acid and 4-thiazolidione appended with derivatized acetic acid' vs 'none' | growth condition | Transcription profiling by array of Arabidopsis after treatment with inhibitors of auxin transcriptional activation |
2.4 | | AT2G39370 | 'treated with 2-(2,4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid; 5 micromolar' vs 'control' | compound | Activation of auxin signalling counteracts photorespiratory hydrogen peroxide dependent cell death |
2.2 | | AT2G39370 | '30 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
2.2 | | AT2G39370 | 'indole-3-acetic acid' vs 'none' in 'nph4-1' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for nph4 or arf19 or both after treatment with indole-3-acetic acid |
-2 | | AT2G39370 | 'auxin and brassinazole' vs 'auxin' | compound | Transcription profiling by array of Arabidopsis after treatment with auxin and brassinazole or auxin only |
1.9 | | AT2G39370 | 'Laccaria bicolor' vs 'none' | infect | Transcription profiling of Arabidopsis thaliana leaves as reaction to fungi (Laccaria bicolor) infection of the roots |
1.9 | | AT2G39370 | 'indole-3-butyric acid; 10 micromolar; wild type' vs 'DMSO; wild type' | compound, genotype | Expression data from Arabidopsis wild type and ibr1 ibr3 ibr10 triple mutant seedlings root tip segments treated with indole-3-butyric acid (IBA) |
-1.9 | | AT2G39370 | 'arsenic; 200 micromolar' vs 'none' in 'Col-0' | compound, ecotype | Transcriptome profiling identified genes and pathways associated with arsenic toxicity and tolerance in Arabidopsis |
1.9 | | AT2G39370 | '6 hours' vs '0 hour' | time | CPIB Lateral Root timecourse |
-1.9 | | AT2G39370 | 'arf7 arf19 double mutant' vs 'wild type' in 'Root Decelerating Elongation Zone' | genotype, organism part | Transcription profiling by array of different organism parts of Arabidopsis mutant for arf7 and arf19 |
1.8 | | AT2G39370 | 'Rhizoctonia solani AG2-1' vs 'mock' | infect | Expression data in whole Arabidopsis seedlings after treatment with Rhizoctonia solani AG8 and AG2-1 |
-1.8 | | AT2G39370 | 'abscisic acids; 50 micromolar' vs 'none' in 'nup85 loss of function mutant' | compound, genotype | An Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress |
-1.8 | | AT2G39370 | 'wild type; Verticillium longisporum isolate VL1 (CBS110220)' vs 'wild type; mock' | genotype, infect | Expression data roots of Arabidopsis plants inoculated with Verticillium longisporum |
-1.7 | | AT2G39370 | 'det1-1 mutant' vs 'wild type' in 'continuous dark (no light) regimen' | genotype, growth condition | Transcription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours |
1.6 | | AT2G39370 | 'DCC1 mutant' vs 'wild type genotype' | genotype | Thioredoxin DCC1 regulates shoot regeneration through modulating multiple genes expression by RNA-seq analyses in Arabidopsis |
1.5 | | AT2G39370 | 'pH 4.5' vs 'pH 6' at 8 hour | growth condition, time | Transcription profiling by array of Arabidopsis grown at low pH |
-1.5 | | AT2G39370 | 'lsm4 mutant' vs 'wild type' in 'Columbia ecotype' | ecotype, genotype | Transcription profiling by high throughput sequencing of Arabidopsis lsm4-1 mutants and sad1/lsm5 double mutants |
1.5 | | AT2G39370 | '120 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
-1.5 | | AT2G39370 | 'arf7 arf19 double mutant' vs 'wild type' in 'Root Mature Zone' | genotype, organism part | Transcription profiling by array of different organism parts of Arabidopsis mutant for arf7 and arf19 |
1.5 | | AT2G39370 | 'empty pRR2222 vector; dark' vs 'empty pRR2222 vector; light' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions |
1.4 | | AT2G39370 | 'indole-3-acetic acid; 1 hour' vs 'indole-3-acetic acid; 0.5 hour' in 'Bay-0' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
-1.4 | | AT2G39370 | 'agl15-4; agl18-1 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for agl15 and agl18 or overexpressing AGL15 during somatic embryogenesis |
1.4 | | AT2G39370 | 'epcr1-/-; epcr2-/-' vs 'wild type genotype' | genotype | The PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq] |
-1.4 | | AT2G39370 | 'rrd2 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis temperature-dependent later root fasciation mutants |
-1.3 | | AT2G39370 | 'bli-1 -/-' vs 'wild type genotype' | genotype | BLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana |
-1.3 | | AT2G39370 | 'complete solution minus iron; 48 hour' vs 'complete solution; 24 hour' in 'Kas-1' | ecotype, growth condition, time | Transcription profiling by array of Arabidopsis Kas-1 and Tsu-1 ecotypes in response to iron deficiency |
1.2 | | AT2G39370 | 'top3A-2' vs 'wild type genotype' | genotype | Transcriptome analysis of top3A-2 complementation lines in Arabidopsis thaliana |
1.2 | | AT2G39370 | 'osmotic stress (3h with 0.3 molar mannitol)' vs 'control' in 'root' | growth condition, organism part | Transcriptome Profiling of Roots and leaves Under High Osmotic Stress in Arabidopsis |
-1.2 | | AT2G39370 | 'mechanical stimulus - water from spray bottle; 25 minute' vs 'none; 0 minute' in 'wild type genotype' | genotype, stimulus, time | RNAseq analysis of early touch responses in myc234 mutants in Arabidopsis |
1.1 | | AT2G39370 | 'indole-3-acetic acid; 1 hour' vs 'indole-3-acetic acid; 0.5 hour' in 'Col-0' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
-1.1 | | AT2G39370 | 'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '6 hour' | compound, injury, time | The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots |
1.1 | | AT2G39370 | '0.125 mM gold for 24 hours' vs 'untreated control' | growth condition | Transcription profiling by array of roots of hydroponically grown Arabidopsis treated with 0.125 mM gold against untreated control to study the uptake of gold |
1.1 | | AT2G39370 | 'hyl1 loss of function mutant' vs 'wild type genotype' | genotype | Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq] |
-1.1 | | AT2G39370 | 'atprmt5 mutant' vs 'wild type genotype' | genotype | AtPRMT5 regulates shoot regeneration through modulating multiple genes expression analyzed by RNA-seq |
-1 | | AT2G39370 | 'lec1-1 mutant' vs 'wild type' in '12 day; Ws' | age, ecotype, genotype | Gene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1] |
1 | | AT2G39370 | 'dexamethasone; 10 micromolar' vs 'none' | compound | Genome-wide analysis of genes regulated by ARR22 overexpression. |
1 | | AT2G39370 | 'indole-3-acetic acid; 1 hour' vs 'indole-3-acetic acid; 0.5 hour' in 'C24' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
-1 | | AT2G39370 | 'chitin' vs 'none' in 'rre2 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin |
-1 | | AT2G39370 | 'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
1 | | AT2G39370 | 'mannitol; 300 millimolar' vs 'none' in 'wild type genotype' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
-1 | | AT2G39370 | 'chitin' vs 'none' in 'wild type' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin |
1 | | AT2G39370 | '1 millimolar ammonium' at '8 hour' vs 'control' at '0 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after growth with either ammonium or nitrate |
-1 | | AT2G39370 | 'sodium chloride; 150 millimolar' vs 'none' in 'wild type genotype' | compound, genotype | RNA-seq of Arabidopsis Col-0, snrk2.4, double snrk2.4/2.10 and quintuple snrk2.1/2.4/2.5/2.9/2.10 mutants from control (0mM) and salt stress (150mM NaCl for 1hour) treatment. |
1 | | AT2G39370 | 'se-2 loss of function mutant' vs 'wild type genotype' | genotype | Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq] |
1 | | AT2G39370 | 'se-2; atxr5; atxr6 triple loss of function mutant' vs 'wild type genotype' | genotype | Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq] |
1 | | AT2G39370 | 'hyl1; atxr5; atxr6 triple loss of function mutant' vs 'wild type genotype' | genotype | Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq] |