AT2G43510 (ATTI1)

arabidopsis thaliana

TI1

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Arabidopsis thaliana
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Showing 35 experiments:
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
7.6152 × 10-9-7.6
AT2G43510'flg22; 100 nanomolar; 45 minute' vs 'none; 8 minute' in 'ein2-5'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
3.8295 × 10-8-7.6
AT2G43510'flg22; 100 nanomolar; 60 minute' vs 'none; 8 minute' in 'ein2-5'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
5.1158 × 10-8-7.6
AT2G43510'flg22; 100 nanomolar; 120 minute' vs 'none; 8 minute' in 'ein2-5'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
8.0749 × 10-77.6
AT2G43510'Pseudomonas syringae pv tomato DC3000(avrRpt2)' vs 'none' in 'gh3.5-1D heterozygous mutant'genotype, infectTranscription profiling by array of Arabidopsis heterozygous mutant for gh3.5 after inoculation with Pseudomonas syringae pv tomato DC3000(avrRpt2) against wild type counterparts and uninfected controls
Adjusted p-valueLog2-fold change
1.834 × 10-7-6.9
AT2G43510'flg22; 100 nanomolar; 60 minute' vs 'none; 8 minute' in 'npr1-1'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
3.2547 × 10-6-6.6
AT2G43510'flg22; 100 nanomolar; 45 minute' vs 'none; 8 minute' in 'npr1-1'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
4.0511 × 10-6-6.4
AT2G43510'flg22; 100 nanomolar; 180 minute' vs 'none; 8 minute' in 'ein2-5'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
2.5867 × 10-6-6.3
AT2G43510'flg22; 100 nanomolar; 120 minute' vs 'none; 8 minute' in 'npr1-1'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
5.2122 × 10-6-6.2
AT2G43510'flg22; 100 nanomolar; 180 minute' vs 'none; 8 minute' in 'npr1-1'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
2.3364 × 10-56.1
AT2G43510'apl mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis phloem from Altered Phloem Development (APL) mutants and wild type controls
Adjusted p-valueLog2-fold change
3.8649 × 10-5-6
AT2G43510'flg22; 100 nanomolar; 60 minute' vs 'none; 8 minute' in 'jar1-1'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
3.0556 × 10-46
AT2G43510'ein2-1; Alternaria brassicicola' at '24 hours post infection' vs 'wild type; mock' at '24 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
4.6026 × 10-205.8
AT2G43510'ANAC017 OEa' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
5.4886 × 10-11-5.8
AT2G43510'rhd6 WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
9.761 × 10-75.8
AT2G43510''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 10 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
3.323 × 10-5-5.8
AT2G43510'flg22; 100 nanomolar; 45 minute' vs 'none; 8 minute' in 'jar1-1'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
7.3484 × 10-5-5.8
AT2G43510'flg22; 100 nanomolar; 120 minute' vs 'none; 8 minute' in 'jar1-1'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
9.1457 × 10-75.6
AT2G43510'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
8.7577 × 10-105.5
AT2G43510'paclobutrazol; 20 micromolar' vs 'none' in 'embryo'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
2.1409 × 10-45.5
AT2G43510'Pseudomonas syringae pv tomato DC3000(avrRpt2)' vs 'none' in 'wild type genotype'genotype, infectTranscription profiling by array of Arabidopsis heterozygous mutant for gh3.5 after inoculation with Pseudomonas syringae pv tomato DC3000(avrRpt2) against wild type counterparts and uninfected controls
Adjusted p-valueLog2-fold change
6.3489 × 10-5-5.4
AT2G43510'flg22; 100 nanomolar; 45 minute' vs 'none; 8 minute' in 'wild type genotype'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
2.4166 × 10-375.3
AT2G43510'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
6.9123 × 10-85.3
AT2G43510'KZ-10 x Mrk-0' vs 'KZ-10'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
9.0381 × 10-55.3
AT2G43510'Heterodera schachtii' vs 'none'infectTranscription profiling by array of Arabidopsis roots infected with the cyst nematode H. schachtii
Adjusted p-valueLog2-fold change
2.047 × 10-4-5.3
AT2G43510'flg22; 100 nanomolar; 60 minute' vs 'none; 8 minute' in 'wild type genotype'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
6.9716 × 10-95.2
AT2G43510'abscisic acid; 20 micromolar' vs 'none' in 'embryo'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
2.8436 × 10-65.2
AT2G43510'Golovinomyces orontii; 8 hour' vs 'none; 0 hour' in 'wild type'genotype, infect, timeTranscription profiling by array of Arabidopsis thaliana WRKY18/40 double knock out infected with Golovinomyces orontii
Adjusted p-valueLog2-fold change
3.3338 × 10-2385.1
AT2G43510'wounding' at '6 hour' vs 'none' at '0 hour'injury, timeTranscriptional response to wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
2.1526 × 10-215.1
AT2G43510'ANAC017 OEb' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
6.6 × 10-13-5.1
AT2G43510'WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
1.6225 × 10-85.1
AT2G43510'KZ-10 x Mrk-0' vs 'Mrk-0'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
8.7548 × 10-65.1
AT2G43510'Pseudomonas syringae pv. tomato' vs 'none' in 'ulp1c/ulp1d double mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
5.4663 × 10-45.1
AT2G43510'ceh1 mutant' vs 'wild type'genotypeTranscriptome of Arabidopsis thaliana ceh1 mutant
Adjusted p-valueLog2-fold change
5.1641 × 10-75
AT2G43510"rps10 RNAi; late onset of silencing (P3)" vs "none; wild type"RNA interference, phenotypeMicroarray data sets of Arabidopsis rps10 mutants with RNAi-silenced expression of mitoribosomal S10 protein
Adjusted p-valueLog2-fold change
3.4015 × 10-45
AT2G43510'dde2-2; Alternaria brassicicola' at '24 hours post infection' vs 'wild type; mock' at '24 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
1.1362 × 10-25
AT2G43510'15 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
1.0528 × 10-64.9
AT2G43510''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 6 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
2.9453 × 10-7-4.8
AT2G43510'ASL9 overexpressor' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing ASL9
Adjusted p-valueLog2-fold change
4.8008 × 10-4-4.8
AT2G43510'flg22; 100 nanomolar; 180 minute' vs 'none; 8 minute' in 'jar1-1'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
8.0852 × 10-4-4.8
AT2G43510'flg22; 100 nanomolar; 180 minute' vs 'none; 8 minute' in 'wild type genotype'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
1.7518 × 10-3-4.7
AT2G43510'flg22; 100 nanomolar; 120 minute' vs 'none; 8 minute' in 'wild type genotype'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
2.5846 × 10-134.6
AT2G43510'Blumeria graminis f. sp. hordei K1; avirulent; 18 hour' vs 'none; wild type phenotype; 18 hour'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
9.9705 × 10-4-4.6
AT2G43510'Golovinomyces orontii; 8 hour' vs 'none; 0 hour' in 'wrky18, wrky40 double mutant'genotype, infect, timeTranscription profiling by array of Arabidopsis thaliana WRKY18/40 double knock out infected with Golovinomyces orontii
Adjusted p-valueLog2-fold change
1.9723 × 10-114.5
AT2G43510'Mir-0 x Se-0' vs 'Se-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
1.2906 × 10-44.5
AT2G43510'mkk1;mkk2 knockout; none' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
8.7162 × 10-24-4.4
AT2G43510'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
4.7713 × 10-64.4
AT2G43510'13 hour' vs '0 hour' in '4 day; root meristematic region'age, organism part, timeTranscription profiling by array of Arabidopsis root sections at different time points after cutting
Adjusted p-valueLog2-fold change
3.2254 × 10-1674.3
AT2G43510'wounding' at '12 hour' vs 'none' at '0 hour'injury, timeTranscriptional response to wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
4.0365 × 10-74.3
AT2G43510'Sclerotinia sclerotiorum' vs 'none' in 'coi1-2 mutant' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
5.4633 × 10-64.3
AT2G43510'scarecrow mutant' vs 'wild type'genotypeTranscription profiling of Scarecrow mutant Arabidopsis root-tips of 5-day-old plants to those of wildtype reveals an evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants
Adjusted p-valueLog2-fold change
1.789 × 10-54.3
AT2G43510'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
3.3025 × 10-5-4.3
AT2G43510'500 micromolar; phosphate' vs 'none' in 'split root'compound, growth conditionTranscription profiling by array of Arabidopsis roots grown with different concentrations of phosphate
Adjusted p-valueLog2-fold change
3.9195 × 10-54.3
AT2G43510'MgCl2' vs 'none' in 'ulp1c/ulp1d double mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
1.049 × 10-44.3
AT2G43510'0.125 mM gold for 24 hours' vs 'untreated control'growth conditionTranscription profiling by array of roots of hydroponically grown Arabidopsis treated with 0.125 mM gold against untreated control to study the uptake of gold
Adjusted p-valueLog2-fold change
2.2905 × 10-74.2
AT2G43510'Plectosphaerella cucumerina inoculation' vs 'control' in 'agb1-1 mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina
Adjusted p-valueLog2-fold change
1.9529 × 10-44.2
AT2G43510'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '24 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
4.2225 × 10-44.2
AT2G43510'returned to basal medium 1 day after osmotic stress' vs 'control' in 'root'growth condition, organism partTranscriptome Profiling of Roots and leaves Under High Osmotic Stress in Arabidopsis
Adjusted p-valueLog2-fold change
7.9646 × 10-44.1
AT2G43510'locally damaged by leafminer' vs 'control'growth conditionTranscription profiling by array of Arabidopsis leaves with localised or systemic damage by leafminer Liriomyza huidobrensis
Adjusted p-valueLog2-fold change
9.488 × 10-1354
AT2G43510'wounding' at '3 hour' vs 'none' at '0 hour'injury, timeTranscriptional response to wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
1.1295 × 10-11-4
AT2G43510'sodium sulfide; des1' vs 'water; des1'compound, genotypeExogenous Sulfide Reverses the Alteration of Transcriptional Profiling of the des1-1 Mutant (Arabidopsis thaliana)
Adjusted p-valueLog2-fold change
7.0819 × 10-104
AT2G43510'Bla-1 x Hh-0' vs 'Bla-1'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
1.5251 × 10-94
AT2G43510'pH 4.5' vs 'pH 6' at 8 hourgrowth condition, timeTranscription profiling by array of Arabidopsis grown at low pH
Adjusted p-valueLog2-fold change
1.7842 × 10-64
AT2G43510'5 hour' vs '0 hour' in '4 day; root meristematic region'age, organism part, timeTranscription profiling by array of Arabidopsis root sections at different time points after cutting
Adjusted p-valueLog2-fold change
3.9286 × 10-213.9
AT2G43510'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'whole plant flowering stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
2.4667 × 10-113.9
AT2G43510'S-nitrosocysteine; 1 millimolar' vs 'buffer'compoundTranscription profiling by high throughput sequencing of Arabidopsis leaf samples infiltrated with S-nitrosocysteine (CysNO)
Adjusted p-valueLog2-fold change
4.6955 × 10-43.9
AT2G43510'osmotic stress (3h with 0.3 molar mannitol)' vs 'control' in 'root'growth condition, organism partTranscriptome Profiling of Roots and leaves Under High Osmotic Stress in Arabidopsis
Adjusted p-valueLog2-fold change
5.6247 × 10-33.9
AT2G43510'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
2.1981 × 10-173.8
AT2G43510'Piereis brassicae; larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
5.0583 × 10-83.8
AT2G43510'Mir-0 x Se-0' vs 'Mir-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
7.6404 × 10-83.8
AT2G43510'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'wild type'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
9.7244 × 10-93.7
AT2G43510'Blumeria graminis f. sp. hordei A6; virulent; 18 hour' vs 'none; wild type phenotype; 18 hour'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.2525 × 10-83.7
AT2G43510'Bla-1 x Hh-0' vs 'Hh-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
1.2302 × 10-63.7
AT2G43510'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
3.2617 × 10-6-3.7
AT2G43510'efr-1; elf18' at '10 hour' vs 'wild type; elf18' at '10 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
2.7709 × 10-53.7
AT2G43510'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
1.7399 × 10-3-3.7
AT2G43510'500 micromolar; phosphate' vs 'none' in 'control'compound, growth conditionTranscription profiling by array of Arabidopsis roots grown with different concentrations of phosphate
Adjusted p-valueLog2-fold change
3.9395 × 10-123.6
AT2G43510'drought' vs 'control' in 'camta1-3 mutant; root'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
2.0216 × 10-93.6
AT2G43510'csn3-1 mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
3.5509 × 10-73.6
AT2G43510'iron deprivation' vs. 'control' at '24 hours' in 'shoot' of 'Tsu-1' ecotypeecotype, organism part, growth condition, timeTranscription profiling by array of Arabidopsis Kas-1 and Tsu-1 grown in iron-deficient medium
Adjusted p-valueLog2-fold change
1.1645 × 10-63.6
AT2G43510'Plectosphaerella cucumerina inoculation' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina
Adjusted p-valueLog2-fold change
9.9241 × 10-43.6
AT2G43510'Plasmodiophora brassicae' vs 'none' at '23 day'infect, timePlasmodiophora brassicae infection of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
6.32 × 10-113.5
AT2G43510'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.7028 × 10-53.5
AT2G43510'csn4-1 mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
4.177 × 10-33.5
AT2G43510'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
2.1328 × 10-423.4
AT2G43510'mannitol; 300 millimolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
2.8392 × 10-313.4
AT2G43510'CL37' vs 'fae1 mutant' in '11 to 12 DPA'developmental stage, genotypeRNASeq of Developing Arabidopsis Seeds Producing Hydroxy-Fatty Acids
Adjusted p-valueLog2-fold change
1.3932 × 10-183.4
AT2G43510'arid2-/-; arid3-/-; arid4-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
7.5939 × 10-63.4
AT2G43510'scrm-D' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings
Adjusted p-valueLog2-fold change
6.8606 × 10-123.3
AT2G43510'water; des1' vs 'water; wild type'compound, genotypeExogenous Sulfide Reverses the Alteration of Transcriptional Profiling of the des1-1 Mutant (Arabidopsis thaliana)
Adjusted p-valueLog2-fold change
7.3711 × 10-73.3
AT2G43510'42 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
3.4238 × 10-63.3
AT2G43510'57 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
9.3141 × 10-6-3.3
AT2G43510'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '24 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
4.6724 × 10-3-3.3
AT2G43510'COBL9::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
2.4049 × 10-2-3.3
AT2G43510'iron deprivation' vs. 'control' at '24 hours' in 'root' of 'Kas-1' ecotypeecotype, organism part, growth condition, timeTranscription profiling by array of Arabidopsis Kas-1 and Tsu-1 grown in iron-deficient medium
Adjusted p-valueLog2-fold change
3.5685 × 10-5-3.2
AT2G43510'iron; 100 micromolar' vs 'none' in 'bhlh100/101 double mutant; shoot'compound, genotype, organism partExpression data from Arabidopsis roots and shoots grown with or without iron
Adjusted p-valueLog2-fold change
9.7877 × 10-53.2
AT2G43510'pvip1;pvip2' vs 'none'rnai, RNA interferenceTranscription profiling by array of Arabidopsis after RNAi-mediated knock-down of pvip1 and pvip2
Adjusted p-valueLog2-fold change
1.6738 × 10-2-3.2
AT2G43510'complete solution minus iron; 24 hour' vs 'complete solution; 24 hour' in 'Kas-1'ecotype, growth condition, timeTranscription profiling by array of Arabidopsis Kas-1 and Tsu-1 ecotypes in response to iron deficiency
Adjusted p-valueLog2-fold change
1.9224 × 10-23.2
AT2G43510'Phytophthora infestans' vs 'none' in 'wild type' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
2.815 × 10-23.2
AT2G43510'22 hour' vs '0 hour' in '4 day; root meristematic region'age, organism part, timeTranscription profiling by array of Arabidopsis root sections at different time points after cutting
Adjusted p-valueLog2-fold change
1.7078 × 10-573.1
AT2G43510'epcr1-/-; epcr2-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
8.5729 × 10-63.1
AT2G43510'ahk2/ahk3/ahk4 triple mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis ahk mutants
Adjusted p-valueLog2-fold change
1.0074 × 10-43.1
AT2G43510'low water potential stress' vs 'control' in 'hai1-2 mutant'genotype, growth conditionComparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant
Adjusted p-valueLog2-fold change
8.8791 × 10-33.1
AT2G43510'phr1 mutant' vs 'wild type genotype' in 'phosphate deprivation; root'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
1.3681 × 10-23.1
AT2G43510'Phytophthora infestans' vs 'none' in 'erp140 mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
5.1453 × 10-683
AT2G43510'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.2298 × 10-673
AT2G43510'bli-1 -/-' vs 'wild type genotype'genotypeBLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.1194 × 10-143
AT2G43510'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for coi1-16 ein2 sid2'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
3.1196 × 10-143
AT2G43510'Col-0; 350 ppb ozone exposure for 2hr' vs 'Col-0; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.6692 × 10-123
AT2G43510'Piereis brassicae; larval feeding' vs 'none; none' in 'whole plant flowering stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
2.6178 × 10-83
AT2G43510'phosphate-lacking medium' vs 'complete medium' in 'wild type'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
6.042 × 10-43
AT2G43510'nudt7-1 sid2-1' vs 'wild type'genotypeTranscription profiling of EDS1- and SA-dependent genes in Arabidopsis nudt7-1
Adjusted p-valueLog2-fold change
7.2554 × 10-52.9
AT2G43510'Rhizoctonia solani AG2-1' vs 'mock'infectExpression data in whole Arabidopsis seedlings after treatment with Rhizoctonia solani AG8 and AG2-1
Adjusted p-valueLog2-fold change
1.782 × 10-42.9
AT2G43510'Rhizoctonia solani AG8' vs 'mock'infectExpression data in whole Arabidopsis seedlings after treatment with Rhizoctonia solani AG8 and AG2-1
Adjusted p-valueLog2-fold change
3.6616 × 10-42.9
AT2G43510'Phytophthera infestans' vs 'none' at '24 hour'infect, timeTranscription profiling by array of Arabidopsis after infection with Phytophthera infestans
Adjusted p-valueLog2-fold change
6.414 × 10-472.8
AT2G43510'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
4.7976 × 10-352.8
AT2G43510'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
1.5138 × 10-9-2.8
AT2G43510'xrn3-8 mutant' vs 'wild type genotype' at 'immediately after cordycepin treatment'genotype, sampling time pointTranscription profiling by array of a stably RNAi-silenced nuclear 5’-3’ exonuclease XRN3 mutant line in Arabidopsis thaliana after transcriptional inhibition with cordycepin
Adjusted p-valueLog2-fold change
3.3271 × 10-62.8
AT2G43510'dms4 mutant' vs 'wild type' at '21 day'age, genotypeTranscription profiling of Arabidopsis dms4-1, drd1-1 and drd1-6 mutant seedlings against wild-type to identify targets of IWR1-like transcription factor
Adjusted p-valueLog2-fold change
2.7147 × 10-52.8
AT2G43510'dexamethasone-induced STM overexpression' vs 'dexamethasone-induced STM knock down by RNAi' at '216 hour'phenotype, sampling time pointTranscription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
Adjusted p-valueLog2-fold change
8.9449 × 10-52.8
AT2G43510'Plasmodiophora brassicae' vs 'none' at '10 day'infect, timePlasmodiophora brassicae infection of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.4695 × 10-42.8
AT2G43510'Phytophthora infestans' vs 'none' in 'erp140 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
1.5379 × 10-42.8
AT2G43510'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
4.0571 × 10-32.8
AT2G43510'Phytophthora infestans' vs 'none' in 'erp2D mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
6.1533 × 10-32.8
AT2G43510'tor mutant' vs 'wild type' in 'glucose; 15 micromolar'compound, genotypeTranscription profiling by array of Arabidopsis estradiol inducible RNAi-tor seedlings treated with glucose
Adjusted p-valueLog2-fold change
9.9877 × 10-602.7
AT2G43510'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.8512 × 10-23-2.7
AT2G43510'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'none'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
6.487 × 10-232.7
AT2G43510'mannitol; 300 millimolar' vs 'none' in 'pyl duodecuple loss of function mutant'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.7859 × 10-212.7
AT2G43510'bzip17 -/- ; bzip28 -/-' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
7.8593 × 10-112.7
AT2G43510'arr21c overexpressing line' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing arr21c
Adjusted p-valueLog2-fold change
6.644 × 10-9-2.7
AT2G43510'xrn3-8 mutant' vs 'wild type genotype' at '60 minutes after cordycepin treatment'genotype, sampling time pointTranscription profiling by array of a stably RNAi-silenced nuclear 5’-3’ exonuclease XRN3 mutant line in Arabidopsis thaliana after transcriptional inhibition with cordycepin
Adjusted p-valueLog2-fold change
7.2573 × 10-92.7
AT2G43510'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky75 mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
7.3541 × 10-92.7
AT2G43510'chr11-1 chr17-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis chr11-1 chr17-1 mutants
Adjusted p-valueLog2-fold change
1.21 × 10-42.7
AT2G43510'phosphate deprivation' vs 'control' in 'wild type genotype; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
1.8522 × 10-3-2.7
AT2G43510'sps1' vs 'wild type'genotypeExpression data from 10-days old dark grown Arabidopsis seedlings of wild type (Col-0), sps1 line and L17 line.
Adjusted p-valueLog2-fold change
2.288 × 10-32.7
AT2G43510"rps10 RNAi; early onset of silencing (P2)" vs "none; wild type"RNA interference, phenotypeMicroarray data sets of Arabidopsis rps10 mutants with RNAi-silenced expression of mitoribosomal S10 protein
Adjusted p-valueLog2-fold change
2.4382 × 10-32.7
AT2G43510'pao-1 mutant' vs 'wild type genotype' in 'continuous dark (no light) regimen' at '2 day'environmental stress, genotype, timeTranscriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway
Adjusted p-valueLog2-fold change
1.0501 × 10-22.7
AT2G43510'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; root'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
3.8691 × 10-22.7
AT2G43510'Col-0; flg22' vs 'Col-0; none'compound, genotypeTranscription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6
Adjusted p-valueLog2-fold change
8.4955 × 10-28-2.6
AT2G43510'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'trichostatin; 1 micromolar'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
5.6289 × 10-92.6
AT2G43510'wild type; Pseudomonas syringae pv. maculicola str. ES4326' vs 'wild type; mock'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance
Adjusted p-valueLog2-fold change
1.5819 × 10-82.6
AT2G43510'Piereis brassicae; eggs only' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
3.367 × 10-42.6
AT2G43510'Phytophthera infestans' vs 'none' at '12 hour'infect, timeTranscription profiling by array of Arabidopsis after infection with Phytophthera infestans
Adjusted p-valueLog2-fold change
6.646 × 10-32.6
AT2G43510'Phytophthora infestans' vs 'none' in 'erp2D mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
9.4036 × 10-32.6
AT2G43510'low water potential stress' vs 'control' in 'wild type'genotype, growth conditionComparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant
Adjusted p-valueLog2-fold change
1.8095 × 10-22.6
AT2G43510'Botrytis cinerea' vs 'none' at '48 hour'infect, timeTranscription profiling by array of Arabidopsis after infection with Botrytis cinerea
Adjusted p-valueLog2-fold change
2.9983 × 10-22.6
AT2G43510'cabbage leaf curl virus infected' vs 'mock infected'infectTranscription profiling by array of Arabidopsis infected with geminivirus Cabbage leaf curl virus
Adjusted p-valueLog2-fold change
5.3033 × 10-242.5
AT2G43510'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky25, wrky33 double mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
4.3975 × 10-92.5
AT2G43510'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-1 mutant'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
1.6348 × 10-62.5
AT2G43510'dexamethasone-induced STM overexpression' vs 'wild type' at '216 hour'phenotype, sampling time pointTranscription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
Adjusted p-valueLog2-fold change
4.7262 × 10-62.5
AT2G43510'Phytophthora infestans' vs 'none' in 'wild type' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
5.355 × 10-6-2.5
AT2G43510'ga1 muant and SCL3 overexpression' vs 'ga1 mutant'genotypeArabidopsis thaliana roots at 7DAG; ga1, ga1 scl3 (LOF) and ga1 SCL3 OE (GOF)
Adjusted p-valueLog2-fold change
5.4013 × 10-62.5
AT2G43510'sid2-1 mutant; Pseudomonas syringae pv. maculicola str. ES4326' vs 'sid2-1 mutant; mock'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance
Adjusted p-valueLog2-fold change
3.134 × 10-32.5
AT2G43510'vte2 mutant' vs 'wild type' in '3 day'age, genotypeTranscription profiling by array of Arabidopsis mutant for vte1 or vte2
Adjusted p-valueLog2-fold change
4.7413 × 10-32.5
AT2G43510'ozone 500 parts per billion' vs 'control'growth conditionArabidopsis thaliana response to ozone
Adjusted p-valueLog2-fold change
4.7413 × 10-32.5
AT2G43510'ozone 500 parts per billion' vs 'control'growth conditionFunctional Genomics of Ozone Stress in Arabidopsis.
Adjusted p-valueLog2-fold change
5.6119 × 10-32.5
AT2G43510'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
1.1253 × 10-22.5
AT2G43510'pnp1-1' vs 'wild type' in 'nutrient medium minus phosphate' at '3 hour'genotype, growth condition, timeTranscription profiling by array of Arabidopsis mutant for pnp after phosphate deprivation
Adjusted p-valueLog2-fold change
1.5035 × 10-22.5
AT2G43510'pvip1; pvip2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for pvip1 and pvip2
Adjusted p-valueLog2-fold change
2.1183 × 10-2-2.5
AT2G43510'complete solution minus iron; 48 hour' vs 'complete solution; 24 hour' in 'Kas-1'ecotype, growth condition, timeTranscription profiling by array of Arabidopsis Kas-1 and Tsu-1 ecotypes in response to iron deficiency
Adjusted p-valueLog2-fold change
2.7198 × 10-22.5
AT2G43510'tor mutant' vs 'wild type' in 'none; 0 micromolar'compound, genotypeTranscription profiling by array of Arabidopsis estradiol inducible RNAi-tor seedlings treated with glucose
Adjusted p-valueLog2-fold change
8.7031 × 10-632.4
AT2G43510'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.8624 × 10-342.4
AT2G43510'ozone; 350 nanoliter' vs 'none' in 'Cvi-0'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
5.0972 × 10-222.4
AT2G43510'Te; 350 ppb ozone exposure for 2hr' vs 'Te; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.8084 × 10-72.4
AT2G43510'Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day'growth condition, infect, sampling time pointLeaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
Adjusted p-valueLog2-fold change
3.2716 × 10-72.4
AT2G43510'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-2 mutant'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
7.0546 × 10-5-2.4
AT2G43510'mbs1-1 mutant' vs 'fluorescent (flu) mutant' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response
Adjusted p-valueLog2-fold change
2.3902 × 10-42.4
AT2G43510'transgenics over expressing LecRKVI.2 (OH1)' vs 'wild type'genotypeTranscriptome profiling of LecRKVI.2 over-expressor plants.
Adjusted p-valueLog2-fold change
1.169 × 10-32.4
AT2G43510'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 gpa1-4 double mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
7.8675 × 10-32.4
AT2G43510'gai mutant' vs 'wild type' in 'methyl jasmonate' at '1 hour'genotype, time, treatmentTranscription profiling by array of Arabidopsis DELLA mutants after treatment with flg22, methyl jasmonate, Alternaria brassicicola or Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
1.0089 × 10-22.4
AT2G43510'Columbia-0; alx8' vs 'Columbia-0; wild type'ecotype, genotypeTranscription profiling of Arabidopsis wild type and SAL1 mutant plants grown under normal conditions
Adjusted p-valueLog2-fold change
1.3839 × 10-22.4
AT2G43510'C3H14 overexpressor' vs 'wild type'genotypeExpression data from Arabidopsis C3H14/15 overexpressors, c3h14c3h15 double mutant vs wild type
Adjusted p-valueLog2-fold change
4.2569 × 10-42-2.3
AT2G43510'Sei-0 x Col F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.0136 × 10-372.3
AT2G43510'wounding; 6 hour' vs 'none; 0 hour' in 'DMSO'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
4.9072 × 10-112.3
AT2G43510'350 ppb ozone exposure for 2hr' vs 'none' in 'wild type'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
4.6079 × 10-92.3
AT2G43510'chr11-1, chr17-1 double mutant' vs 'wild type' at '8 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
1.6956 × 10-6-2.3
AT2G43510'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
8.3207 × 10-62.3
AT2G43510'spx1,spx2 double mutant' vs 'wild type' in 'complete medium'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
2.235 × 10-52.3
AT2G43510'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
8.4052 × 10-52.3
AT2G43510'AT4G01050 knock out' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis TROL knock-out plants
Adjusted p-valueLog2-fold change
1.4179 × 10-42.3
AT2G43510'GST-NPP1 1uM' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
1.2449 × 10-32.3
AT2G43510'elf18; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.4171 × 10-71-2.2
AT2G43510'silver(1+) nitrate, 10 micromolar; N-benzyladenine, 3 micromolar' vs 'silver(1+) nitrate, 10 micromolar'stimulusEthylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway.
Adjusted p-valueLog2-fold change
2.0465 × 10-452.2
AT2G43510'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.8886 × 10-92.2
AT2G43510'350 ppb ozone exposure for 2hr' vs 'control' in 'coi1-16 ein2 sid2'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
5.4892 × 10-62.2
AT2G43510'GID1b over expression in sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
6.8343 × 10-52.2
AT2G43510'scrm-D;mute' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings
Adjusted p-valueLog2-fold change
7.5634 × 10-5-2.2
AT2G43510'transgenic KANADI1 fused to GR domain' vs 'wild type genotype' in 'Collection day two' at '0 minute'block, genotype, timeExpression data from Arabidopsis GR-REVOLUTA and KANADI1-GR transgenic seedlings
Adjusted p-valueLog2-fold change
4.1924 × 10-42.2
AT2G43510'HrpZ 10uM' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
1.3469 × 10-32.2
AT2G43510'pkr2 pkl' vs 'wild type'genotypeTranscription profiling of Arabidopsis pickle mutants
Adjusted p-valueLog2-fold change
2.5593 × 10-32.2
AT2G43510'35S::MIF1; light' vs 'empty pRR2222 vector; light'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
4.5392 × 10-32.2
AT2G43510'water deprivation' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after water deprivation
Adjusted p-valueLog2-fold change
1.2646 × 10-2-2.2
AT2G43510'2-(4-carboxyphenyl)-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide' vs 'none'compoundExpression data from Arabidopsis thaliana treated with NO donor SNP, compared to NO depletion by cPTIO
Adjusted p-valueLog2-fold change
3.5985 × 10-462.1
AT2G43510'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-3'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
1.512 × 10-152.1
AT2G43510'hyl1; atxr5; atxr6 triple loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
1.0351 × 10-92.1
AT2G43510'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
1.2876 × 10-82.1
AT2G43510'drought' vs 'control' in 'wild type; root'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
3.7806 × 10-72.1
AT2G43510'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
2.4566 × 10-62.1
AT2G43510'ga1-3 mutant' vs 'wild type' in 'flower bud'genotype, organism partTranscription profiling of Arabidopsis seed and flowers of ga1-3 mutant
Adjusted p-valueLog2-fold change
5.0891 × 10-6-2.1
AT2G43510'pepr1-1 Pepr2-3; Pep2' at '10 hour' vs 'wild type; Pep2' at '10 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
1.8125 × 10-42.1
AT2G43510'eds16 mutant; Golovinomyces orontii infection' vs 'eds16 mutant; no infection' at 7 daygenotype, infect, timeTranscription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii
Adjusted p-valueLog2-fold change
2.2435 × 10-42.1
AT2G43510'19 months dry after-ripening' vs '2 weeks dry after-ripening' in 'sly1-2 mutant'environmental history, genotypeDry seed transcriptome differences associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
3.7922 × 10-42.1
AT2G43510'Erysiphe orontii' vs 'none' at '120 hour'infect, timeTranscription profiling by array of Arabidopsis after inoculation with Erysiphe orontii
Adjusted p-valueLog2-fold change
4.4724 × 10-42.1
AT2G43510'nlp20; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
5.4433 × 10-42.1
AT2G43510'lrx1 rol1-2' vs 'wild type'genotypeTranscription profiling of Arabidopsis lrx1 root hair mutant and the suppressor mutations lrx1 rol1-1 and lrx1 rol1-2
Adjusted p-valueLog2-fold change
3.1952 × 10-32.1
AT2G43510'C3H15 overexpressor' vs 'wild type'genotypeExpression data from Arabidopsis C3H14/15 overexpressors, c3h14c3h15 double mutant vs wild type
Adjusted p-valueLog2-fold change
1.0216 × 10-22.1
AT2G43510'oligogalacturonide' vs 'water' at '3 hour'compound, timeTranscription profiling by array of Arabidopsis after treatment with oligogalacturonides
Adjusted p-valueLog2-fold change
1.3409 × 10-22.1
AT2G43510'powdery mildew infected' vs 'uninfected' in 'syringolin; 20 micromolar' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
1.7965 × 10-22.1
AT2G43510'abscisic acid 2 micromolar' vs 'control' in 'no SNRK3.15 expression'growth condition, phenotypeTranscription profiling of DEX-inducible SNRK3.15 Arabidopsis seedlings in the presence of ABA
Adjusted p-valueLog2-fold change
1.8057 × 10-2-2.1
AT2G43510'37 degrees celsius' vs '20 degrees celsius'compound, temperatureTranscription profiling by array of Arabidopsis after heat shock or treatment with tunicamycin or L-azetidine-2-carboxylic acid
Adjusted p-valueLog2-fold change
2.8219 × 10-22.1
AT2G43510'Cax1/Cax3 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis cax1/cax3 double mutants
Adjusted p-valueLog2-fold change
3.135 × 10-22.1
AT2G43510'ozone' vs 'control' in 'wild type' at '48 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis G-protein knockout plants in response to ozone
Adjusted p-valueLog2-fold change
1.4711 × 10-132
AT2G43510'350 ppb ozone exposure for 2hr' vs 'control' in 'tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
2.4269 × 10-12-2
AT2G43510'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
6.3223 × 10-72
AT2G43510'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.5177 × 10-62
AT2G43510'sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
1.1217 × 10-42
AT2G43510'100 micromolar; 4-chloro-6-methyl-2-phenylpyrimidine' vs 'control' at '24 hour'compound, timeTranscription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine
Adjusted p-valueLog2-fold change
2.8341 × 10-42
AT2G43510'Flg-22 1uM' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
2.9995 × 10-42
AT2G43510'4 days salt treatment' vs 'control'growth conditionTranscription profiling by array of Arabidopsis leaves under the condition of salt-induced senescence
Adjusted p-valueLog2-fold change
4.0495 × 10-32
AT2G43510'Phytophthera infestans' vs 'none' at '6 hour'infect, timeTranscription profiling by array of Arabidopsis after infection with Phytophthera infestans
Adjusted p-valueLog2-fold change
6.3318 × 10-32
AT2G43510'fdh-3940 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis mutant for bodyguard (bdg), lacerata (lcr) and fiddlehead (fdh) against wild-type controls
Adjusted p-valueLog2-fold change
6.5243 × 10-32
AT2G43510'phosphate deprivation' vs 'control' in 'wild type genotype; root'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
9.3785 × 10-32
AT2G43510'trasngenic REVOLUTA fused to GR domain' vs 'wild type genotype' in 'Collection day one' at '0 minute'block, genotype, timeExpression data from Arabidopsis GR-REVOLUTA and KANADI1-GR transgenic seedlings
Adjusted p-valueLog2-fold change
1.3254 × 10-22
AT2G43510'frb1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for frb1
Adjusted p-valueLog2-fold change
1.168 × 10-471.9
AT2G43510'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.5506 × 10-251.9
AT2G43510'drought environment' vs 'normal watering' in 'vtc2 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.8522 × 10-171.9
AT2G43510'CT101; 350 ppb ozone exposure for 2hr' vs 'CT101; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.9031 × 10-91.9
AT2G43510'Spt4 knock down' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis RNAi knock-down plants of SPT4-1 and SPT4-2
Adjusted p-valueLog2-fold change
1.386 × 10-51.9
AT2G43510'bli-1 -/-; ire1b -/-' vs 'wild type genotype'genotypeBLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.5781 × 10-5-1.9
AT2G43510'pao-1 mutant' vs 'wild type genotype' in 'none' at '0 day'environmental stress, genotype, timeTranscriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway
Adjusted p-valueLog2-fold change
3.7118 × 10-51.9
AT2G43510'auxin' vs 'none' in '7 day'age, growth conditionTranscription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin
Adjusted p-valueLog2-fold change
6.3715 × 10-5-1.9
AT2G43510'35S:MBS1 overexpression' vs 'fluorescent (flu) mutant' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response
Adjusted p-valueLog2-fold change
3.4561 × 10-41.9
AT2G43510'hmr-5 null mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis hemera null (hmr-5) and weak-allele (hmr-22) photomorphogenetic mutants against wild-type controls grown under red light
Adjusted p-valueLog2-fold change
7.9085 × 10-41.9
AT2G43510'pmr5 pmr6 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for pmr5 and/or pmr6
Adjusted p-valueLog2-fold change
2.121 × 10-21.9
AT2G43510'ANAC017 OEb' vs 'wild type genotype' at '0 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
5.541 × 10-571.8
AT2G43510'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.049 × 10-201.8
AT2G43510'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
8.1044 × 10-20-1.8
AT2G43510'brm-1' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of BRAHMA (BRM) and H3K27 demethylase (REF6) mutants in Arabidopsis
Adjusted p-valueLog2-fold change
3.2845 × 10-81.8
AT2G43510'abscisic acids; 100 micromolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
6.1262 × 10-81.8
AT2G43510'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wild type'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
1.068 × 10-7-1.8
AT2G43510'tunicamycin; 5 microgram per milliliter' vs 'none' in 'wild type genotype'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
5.4225 × 10-6-1.8
AT2G43510'ethanol; 2.5 percent' vs 'control' in 'ethanol-inducible TOC1 transgenic line; 12 days in LD + 1 day in constant light (LL)'compound, genotype, growth conditionGene expression from Inducible TOC1 expression in Arabidopsis seedlings
Adjusted p-valueLog2-fold change
3.6388 × 10-4-1.8
AT2G43510'sodium chloride; 50 millimolar; atpao5-3 mutant' vs 'sodium chloride; 50 millimolar; wild type genotype'compound, genotypeTranscription profiling by array of Arabidopsis wild type and polyamine oxidase 5 loss-of-function mutant exposed to sodium chloride
Adjusted p-valueLog2-fold change
4.0641 × 10-41.8
AT2G43510'Pseudomonas syringae ES4326' vs 'none' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
2.0673 × 10-31.8
AT2G43510'35S::MIF1; dark' vs 'empty pRR2222 vector; dark'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
3.3782 × 10-3-1.8
AT2G43510'ethanol; 2.5 percent' vs 'control' in 'wild type; 13 days in 12 h light/12 h dark (LD)'compound, genotype, growth conditionGene expression from Inducible TOC1 expression in Arabidopsis seedlings
Adjusted p-valueLog2-fold change
7.8385 × 10-31.8
AT2G43510'ein2-5' vs 'wild type genotype' in 'none; 8 minute'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
9.1547 × 10-31.8
AT2G43510'wild type; Golovinomyces orontii infection' vs 'wild type; no infection' at 7 daygenotype, infect, timeTranscription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii
Adjusted p-valueLog2-fold change
1.3451 × 10-21.8
AT2G43510'nudt7-1' vs 'wild type'genotypeTranscription profiling of EDS1- and SA-dependent genes in Arabidopsis nudt7-1
Adjusted p-valueLog2-fold change
1.9694 × 10-21.8
AT2G43510'vte2 mutant' vs 'wild type' in '1 day'age, genotypeTranscription profiling by array of Arabidopsis mutant for vte1 or vte2
Adjusted p-valueLog2-fold change
3.1203 × 10-21.8
AT2G43510'nlp20; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.9425 × 10-21.8
AT2G43510'mpk6 knockout; flg22' vs 'mpk6 knockout; none'compound, genotypeTranscription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6
Adjusted p-valueLog2-fold change
6.3516 × 10-251.7
AT2G43510'abscisic acid; 50 micromolar' vs 'mock' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
5.5813 × 10-131.7
AT2G43510'short Poly(A)-tail; paps1-1' vs 'short Poly(A)-tail; wild type'RNA, genotypeGenome-wide analysis of PAPS1-dependent polyadenylation identifies novel roles for functionally specialized poly(A) polymerases in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.697 × 10-91.7
AT2G43510'pkl mutant; uniconazole' vs 'wild_type; uniconazole'compound, genotypeTranscription profiling by array of Arabidopsis mutant for pickle after treatment with uniconazole
Adjusted p-valueLog2-fold change
2.2252 × 10-81.7
AT2G43510'30% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature'growth conditionTranscription profiling by array of Arabidopsis after growth at different temperatures
Adjusted p-valueLog2-fold change
1.8698 × 10-71.7
AT2G43510'swp73b-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis swp73b-1 mutant
Adjusted p-valueLog2-fold change
6.6311 × 10-71.7
AT2G43510'glu1-2 mutant' vs 'wild type' in 'rosette leaf'genotype, organism partTranscription profiling by array of Arabidopsis mutant for Fd-GOGAT1/GLU1
Adjusted p-valueLog2-fold change
5.9294 × 10-61.7
AT2G43510'arsenic; 100 micromolar' vs 'none' in 'Ws-2'compound, ecotypeTranscriptome profiling identified genes and pathways associated with arsenic toxicity and tolerance in Arabidopsis
Adjusted p-valueLog2-fold change
1.2274 × 10-51.7
AT2G43510'ahk2ahk3' vs 'wild type' in '23 degree celsius'genotype, temperatureTranscription profiling by array of genes regulated by ahk2 ahk3 in response to cold in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.6106 × 10-5-1.7
AT2G43510'brm-1 ref6-1' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of BRAHMA (BRM) and H3K27 demethylase (REF6) mutants in Arabidopsis
Adjusted p-valueLog2-fold change
7.2695 × 10-5-1.7
AT2G43510'ethanol; 2.5 percent' vs 'control' in 'ethanol-inducible TOC1 transgenic line; 13 days in 12 h light/12 h dark (LD)'compound, genotype, growth conditionGene expression from Inducible TOC1 expression in Arabidopsis seedlings
Adjusted p-valueLog2-fold change
7.414 × 10-51.7
AT2G43510'transgenic LeB4::AtHb1' vs 'wild type' in 'control'genotype, growth conditionExpression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions
Adjusted p-valueLog2-fold change
1.4948 × 10-4-1.7
AT2G43510'C24 x Ler F1 hybrid' vs 'Landsberg erecta ecotype'genotypeTranscription profiling by high throughput sequencing of Arabidopsis Ler and C24 ecotypes and their reciprocal hybrids
Adjusted p-valueLog2-fold change
2.8699 × 10-41.7
AT2G43510'cdkf,1-2 T-DNA insertion mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis cdkf;1-2 mutant
Adjusted p-valueLog2-fold change
6.146 × 10-4-1.7
AT2G43510'ddm1-12 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis polyploidy-associated transcriptional gene silencing (paTGS) mutants ddm1-12 and hog1-7 against wild type controls
Adjusted p-valueLog2-fold change
8.6681 × 10-41.7
AT2G43510'ga1-3 mutant' vs 'wild type' in 'seed'genotype, organism partTranscription profiling of Arabidopsis seed and flowers of ga1-3 mutant
Adjusted p-valueLog2-fold change
1.8929 × 10-3-1.7
AT2G43510'RNAi-MBS2/mbs1-1 knockdown' vs 'fluorescent (flu) mutant' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response
Adjusted p-valueLog2-fold change
2.2616 × 10-31.7
AT2G43510'arf6-2, arf8-3 double mutant' vs 'wild type' at 'petal differentiation and expansion stage'developmental stage, genotypeTranscription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant
Adjusted p-valueLog2-fold change
4.6266 × 10-31.7
AT2G43510'val1 mutant' vs 'wild type' at '15 days after pollination'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
5.9629 × 10-31.7
AT2G43510'pkl' vs 'wild type'genotypeTranscription profiling of Arabidopsis pickle mutants
Adjusted p-valueLog2-fold change
7.301 × 10-3-1.7
AT2G43510'gpt2 T-DNA mutant' vs 'wild type genotype' in 'low light intensity' at '1 day'genotype, growth condition, timeAcclimation of photosynthesis to changes in the environment results decreases oxidative stress in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.7237 × 10-31.7
AT2G43510'wild type; Pseudomonas syringae pv. tomato DC3000' vs 'wild type; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
1.4546 × 10-2-1.7
AT2G43510'Atwrky12-1' vs 'wild type'genotypeGene expression profiling of Arabidopsis Atwrky12 mutants stems
Adjusted p-valueLog2-fold change
3.8495 × 10-21.7
AT2G43510'flg22' vs 'water' at '1 hour'compound, timeTranscription profiling by array of Arabidopsis after treatment with oligogalacturonides
Adjusted p-valueLog2-fold change
5.5543 × 10-251.6
AT2G43510'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-4'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
2.4937 × 10-161.6
AT2G43510'wild type; Botrytis cinerea 2100' vs 'wild type; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
3.4876 × 10-15-1.6
AT2G43510'Sei-0 x Col-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
1.5729 × 10-111.6
AT2G43510'Sphingomonas melonis Fr1 colonization; Pseudomonas syringae DC3000' vs 'axenic plant' at '2 day'growth condition, infect, sampling time pointLeaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
Adjusted p-valueLog2-fold change
1.717 × 10-91.6
AT2G43510'arr22-ox' vs 'wild type' in 't-zeatin'genotype, growth conditionTranscription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin
Adjusted p-valueLog2-fold change
1.7458 × 10-7-1.6
AT2G43510'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
3.8268 × 10-71.6
AT2G43510'bzip17 -/- ; bzip28 -/-' vs 'wild type genotype' in 'none'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
3.7515 × 10-61.6
AT2G43510'clf28 mutant' vs 'wild type' in 'silique'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
3.6319 × 10-4-1.6
AT2G43510'C24 x Ler F1 hybrid' vs 'C24 ecotype'genotypeTranscription profiling by high throughput sequencing of Arabidopsis Ler and C24 ecotypes and their reciprocal hybrids
Adjusted p-valueLog2-fold change
3.9116 × 10-4-1.6
AT2G43510'microRNA targeting Umkirch-3 allele of At5g41750' vs 'control'genotypeTranscription profiling of Arabidopsis Umkirch-1/Umkirch-3 hybrid plants compared to siblings carrying a microRNA targeting the Umkirch-3 allele of At5g41750
Adjusted p-valueLog2-fold change
1.0484 × 10-31.6
AT2G43510'ahk2ahk3' vs 'wild type' in '1 degree celsius'genotype, temperatureTranscription profiling by array of genes regulated by ahk2 ahk3 in response to cold in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.1394 × 10-31.6
AT2G43510'trasngenic REVOLUTA fused to GR domain' vs 'wild type genotype' in 'Collection day one' at '30 minute'block, genotype, timeExpression data from Arabidopsis GR-REVOLUTA and KANADI1-GR transgenic seedlings
Adjusted p-valueLog2-fold change
7.6872 × 10-31.6
AT2G43510'lcr-3P77 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis mutant for bodyguard (bdg), lacerata (lcr) and fiddlehead (fdh) against wild-type controls
Adjusted p-valueLog2-fold change
8.4744 × 10-31.6
AT2G43510'arr22-ox' vs 'wild type' in 'none'genotype, growth conditionTranscription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin
Adjusted p-valueLog2-fold change
9.2282 × 10-31.6
AT2G43510'vtc2' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for abi4 and/or vtc2
Adjusted p-valueLog2-fold change
1.2065 × 10-2-1.6
AT2G43510'Atwrky12-2' vs 'wild type'genotypeGene expression profiling of Arabidopsis Atwrky12 mutants stems
Adjusted p-valueLog2-fold change
1.4252 × 10-21.6
AT2G43510'Phytophthora infestans' vs 'none' in 'erp2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
2.1562 × 10-21.6
AT2G43510'optimum photosynthesis temperature' vs 'baseline growth temperature'growth conditionTranscription profiling by array of Arabidopsis after growth at different temperatures
Adjusted p-valueLog2-fold change
2.4408 × 10-2-1.6
AT2G43510'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
2.8217 × 10-2-1.6
AT2G43510'AGL15 overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for agl15 and agl18 or overexpressing AGL15 during somatic embryogenesis
Adjusted p-valueLog2-fold change
2.8264 × 10-21.6
AT2G43510'total RNA; turnip mosaic virus inoculated' vs 'total RNA; mock'RNA, infectThe effect of TuMV on translation initiation in Arabidopsis
Adjusted p-valueLog2-fold change
6.5795 × 10-27-1.5
AT2G43510'ref4-3; cdk8-1' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1
Adjusted p-valueLog2-fold change
3.1439 × 10-71.5
AT2G43510'bleomycin and 2, 6-dichloroisonicotinic acid' vs 'none'stimulusTranscription profiling by array of Arabidopsis seedlings grown after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment to identify synergistically induced defence genes
Adjusted p-valueLog2-fold change
3.2804 × 10-71.5
AT2G43510'camta1-3 mutant' vs 'wild type' in 'drought; root'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
1.9161 × 10-61.5
AT2G43510'bak1-3; Pep2' at '10 hour' vs 'wild type; Pep2' at '10 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
2.0658 × 10-61.5
AT2G43510'cs26 mutant' vs 'wild type' in 'long day photoperiod'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods
Adjusted p-valueLog2-fold change
2.5276 × 10-61.5
AT2G43510'Sphingomonas melonis Fr1 colonization; Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day'growth condition, infect, sampling time pointLeaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
Adjusted p-valueLog2-fold change
2.6293 × 10-61.5
AT2G43510'wounding; 3 hour' vs 'none; 0 hour' in 'DMSO'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
5.5504 × 10-61.5
AT2G43510'mbd6 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.4276 × 10-51.5
AT2G43510'nph4-1 arf19-1 mutant' vs 'wild type' in 'no compound'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
6.4636 × 10-51.5
AT2G43510'nph4-1 arf19-1 mutant' vs 'wild type' in 'indole-3-acetic acid'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
1.3808 × 10-41.5
AT2G43510'spch' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings
Adjusted p-valueLog2-fold change
2.963 × 10-41.5
AT2G43510'homozygous AtCesA4' vs 'heterozygous AtCesA4'genotypeTranscription profiling by array of Arabidopsis cellulose synthase mutants
Adjusted p-valueLog2-fold change
3.1738 × 10-41.5
AT2G43510'dcl3-1 mutant' vs 'wild type' in 'Col-0'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for dcl1, dcl2, hen1, hst, hyl1, rdr1, rdr2, or rdr6
Adjusted p-valueLog2-fold change
3.7499 × 10-4-1.5
AT2G43510'arp6-1' vs 'wild type genotype'genotypeArabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition. [RNA-Seq]
Adjusted p-valueLog2-fold change
4.643 × 10-41.5
AT2G43510'elf18; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
5.2787 × 10-41.5
AT2G43510'ozone; 350 nanoliter' vs 'none' in 'Shahdara'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
1.1013 × 10-3-1.5
AT2G43510'pepr1-1 Pepr2-3; Pep2' at '2 hour' vs 'wild type; Pep2' at '2 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
2.1721 × 10-31.5
AT2G43510'sodium chloride; 50 millimolar; wild type genotype' vs 'none; ; wild type genotype'compound, genotypeTranscription profiling by array of Arabidopsis wild type and polyamine oxidase 5 loss-of-function mutant exposed to sodium chloride
Adjusted p-valueLog2-fold change
2.4244 × 10-31.5
AT2G43510'double mutant APK1/APK2' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for apk1 and apk2
Adjusted p-valueLog2-fold change
3.0813 × 10-3-1.5
AT2G43510'flg22; 100 nanomolar; 15 minute' vs 'none; 8 minute' in 'npr1-1'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
3.7326 × 10-31.5
AT2G43510'methyl jasmonate' vs 'mock' in 'wild type'compound, genotypeExpression profiling of wild-type Arabidopsis and an activation-tagged jaz7-1D line.
Adjusted p-valueLog2-fold change
6.3975 × 10-31.5
AT2G43510'bhlh100/101 double mutant' vs 'wild type' in 'none; shoot'compound, genotype, organism partExpression data from Arabidopsis roots and shoots grown with or without iron
Adjusted p-valueLog2-fold change
1.9531 × 10-21.5
AT2G43510'Erysiphe orontii' vs 'none' at '96 hour'infect, timeTranscription profiling by array of Arabidopsis after inoculation with Erysiphe orontii
Adjusted p-valueLog2-fold change
2.1182 × 10-21.5
AT2G43510'Piereis brassicae; eggs only' vs 'none; none' in 'whole plant flowering stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
2.2086 × 10-2-1.5
AT2G43510'rps2 mutant' vs 'wild type genotype' in 'none' at '0 hour'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
2.7401 × 10-2-1.5
AT2G43510'atbzip16; red-light and long-day (0.5 μmole m-2 sec-1)' vs 'atbzip16; dark'genotype, lightTranscription profiling by array of Arabidopsis early seedling development
Adjusted p-valueLog2-fold change
3.9379 × 10-2-1.5
AT2G43510'480 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
4.7248 × 10-2-1.5
AT2G43510'ethanol-inducible TOC1 transgenic line' vs 'wild type' in 'ethanol; 2.5 percent; 12 days in LD + 1 day in constant light (LL)'compound, genotype, growth conditionGene expression from Inducible TOC1 expression in Arabidopsis seedlings
Adjusted p-valueLog2-fold change
4.7582 × 10-21.5
AT2G43510'low pH (pH 4.6)' vs 'standard pH (pH 5.7)' in 'root epidermis and lateral root cap'growth condition, organism partTranscription profiling by array of Arabidopsis root cells after growth in low pH conditions
Adjusted p-valueLog2-fold change
4.8087 × 10-21.5
AT2G43510'18 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei K1; avirulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
4.8287 × 10-21.5
AT2G43510'1 micromolar salicylic acid at ZT24' vs 'water at ZT24' at '0 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)
Adjusted p-valueLog2-fold change
1.8572 × 10-17-1.4
AT2G43510'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
1.0998 × 10-161.4
AT2G43510'drought environment' vs 'normal watering' in 'vtc2.5 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.7041 × 10-111.4
AT2G43510'Methylobacterium extorquens PA1 colonization; Pseudomonas syringae DC3000' vs 'axenic plant' at '2 day'growth condition, infect, sampling time pointLeaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
Adjusted p-valueLog2-fold change
1.7853 × 10-81.4
AT2G43510'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '1 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
8.205 × 10-61.4
AT2G43510'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'spx1,spx2 double mutant'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
3.5577 × 10-51.4
AT2G43510'gun4-1 mutant' vs 'wild type' in 'no compound'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for gun4 or treated with gabaculin
Adjusted p-valueLog2-fold change
4.0518 × 10-5-1.4
AT2G43510'C24 x Ler F1 hybrid' vs 'Ler'genotypeTranscription profiling by high throughput sequencing of Arabidopsis F1 hybrids from crosses between C24, Landsberg erecta (Ler) and Columbia (Col)
Adjusted p-valueLog2-fold change
4.5546 × 10-5-1.4
AT2G43510'oxt6:AtCPSF30' vs 'wild type'genotypeA polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.5767 × 10-51.4
AT2G43510'AP1::AtIPT4 transgenic plant' vs 'wild type'genotypeTranscription profiling by array of young inflorescences of AP1∷AtIPT4 Arabidopsis thaliana transgenic plants to identify the candidate genes responsive to cytokinin
Adjusted p-valueLog2-fold change
5.6829 × 10-51.4
AT2G43510'axr3-1 mutant' vs 'wild type' in 'no compound'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
7.9414 × 10-51.4
AT2G43510'Blumeria graminis f.sp. hordei' vs 'none' in 'ataf1-1'genotype, infectTranscription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei
Adjusted p-valueLog2-fold change
3.6108 × 10-41.4
AT2G43510'40 micromolar; rotenone' vs '0.25 percent; methanol' at '12 hour'compound, timeTranscription profiling by array of Arabidopsis cell cultures treated with rotenone
Adjusted p-valueLog2-fold change
1.0811 × 10-3-1.4
AT2G43510'35S:LSD1-GFP' vs 'dexamethasone; 30 micromolar; 35S:LSD1-GR'compound, genotypeRNA-seq to investigate dual role of lesion simulating disease 1 as a condition-dependent scaffold protein and transcription regulator in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.4076 × 10-31.4
AT2G43510'edr1 mutant' vs 'wild type' in 'Golovinomyces cichoracearum' at '18 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for edr1 after infection with Golovinomyces cichoracearum
Adjusted p-valueLog2-fold change
2.1583 × 10-31.4
AT2G43510'ahk3/ahk4 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis ahk mutants
Adjusted p-valueLog2-fold change
3.1962 × 10-3-1.4
AT2G43510'lithium chloride, 100 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
3.2044 × 10-31.4
AT2G43510'abscisic acid' vs 'ethanol'compoundTranscription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea
Adjusted p-valueLog2-fold change
4.3278 × 10-3-1.4
AT2G43510'rdr6-15 mutant' vs 'wild type' in 'Col-0'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for dcl1, dcl2, hen1, hst, hyl1, rdr1, rdr2, or rdr6
Adjusted p-valueLog2-fold change
4.6203 × 10-31.4
AT2G43510'jasmonic acid; high red/far-red ratio' vs 'mock; high red/far-red ratio'compound, treatmentExpression data from low Red:Far-Red ratio and Jasmonic Acid crosstalk in Arabidopsis
Adjusted p-valueLog2-fold change
6.4117 × 10-31.4
AT2G43510'msh1 albino mutant' vs 'wild type'genotypeTranscript profiling of Arabidopsis albino msh1 mutants
Adjusted p-valueLog2-fold change
6.5927 × 10-31.4
AT2G43510'ddm1 mutant' vs 'wild type genotype'genotypeGene expression in Arabidopsis ddm1 mutants with high levels of Transposable Element activity
Adjusted p-valueLog2-fold change
6.8821 × 10-3-1.4
AT2G43510'Meloidogyne incognita infested region' vs 'Meloidogyne incognita non-infested region' at '14 day'sampling site, timeTranscription profiling by array of Arabidopsis root cells infested with Meloidogyne incognita 14 or 21 days after inoculation
Adjusted p-valueLog2-fold change
1.8306 × 10-21.4
AT2G43510'abi4 vtc2' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for abi4 and/or vtc2
Adjusted p-valueLog2-fold change
2.1561 × 10-21.4
AT2G43510'npr1-3' vs 'wild type' in '3,5-dichloroanthranilic acid' at '2 day'compound, genotype, timeTranscription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid
Adjusted p-valueLog2-fold change
3.6463 × 10-2-1.4
AT2G43510'exposed to 10 degree Celsius; gemin2 mutant; 24 hour' vs 'control; gemin2 mutant'environmental stress, genotype, timeGenome-wide analysis of wild type and gemin2 mutant plants [cold exposure]
Adjusted p-valueLog2-fold change
4.0348 × 10-21.4
AT2G43510'24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei K1; avirulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
4.1642 × 10-21.4
AT2G43510'dcl1-15 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis wild-type and dcl1-15 torpedo-staged embryos
Adjusted p-valueLog2-fold change
2.355 × 10-38-1.3
ATTI1'dja6; dja5 double mutant' vs 'wild type genotype'genotypeRNA-seq of WT and dja6 dja5 mutant in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
8.2045 × 10-25-1.3
AT2G43510'tunicamycin; 5 microgram per milliliter' vs 'none' in 'bzip17 -/- ; bzip28 -/-'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
4.1111 × 10-21-1.3
AT2G43510'2 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
4.9304 × 10-101.3
AT2G43510'long Poly(A)-tail; paps1-1' vs 'long Poly(A)-tail; wild type'RNA, genotypeGenome-wide analysis of PAPS1-dependent polyadenylation identifies novel roles for functionally specialized poly(A) polymerases in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.9009 × 10-91.3
AT2G43510'pkl mutant; no compound' vs 'wild type; no compound'compound, genotypeTranscription profiling by array of Arabidopsis mutant for pickle after treatment with uniconazole
Adjusted p-valueLog2-fold change
1.3748 × 10-81.3
AT2G43510'wounding; 6 hour' vs 'none; 0 hour' in 'gamma-butyrolactone; 25 micromolar'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
5.0051 × 10-81.3
AT2G43510'abi4-102' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for vtc1 or abi4
Adjusted p-valueLog2-fold change
4.6349 × 10-7-1.3
AT2G43510'At3g24500 overexpression' vs 'wild type'genotypeOver-expression of MBF1c enhances stress tolerance
Adjusted p-valueLog2-fold change
6.8018 × 10-61.3
AT2G43510'cys-c1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for cys-c1
Adjusted p-valueLog2-fold change
1.2315 × 10-5-1.3
AT2G43510'nano-ceria; 500 milligram per liter' vs 'water'compoundExpression data from 12-day old Arabidopsis germinants
Adjusted p-valueLog2-fold change
9.7158 × 10-51.3
AT2G43510'powdery mildew' vs 'none' in 'wild type genotype'genotype, infectTranscription profiling of Arabidopsis callose synthase deficient (pmr4-1) mutant and wild type plants infected with powdery mildew
Adjusted p-valueLog2-fold change
2.3266 × 10-41.3
AT2G43510'RNAi knock out line 1' vs 'wild type' in 'Nd-1'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for At2g19270
Adjusted p-valueLog2-fold change
4.4624 × 10-41.3
AT2G43510'anac017 T-DNA mutant' vs 'wild type genotype' at '1 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
4.9881 × 10-4-1.3
AT2G43510'cs26 mutant' vs 'wild type' in 'short day photoperiod'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods
Adjusted p-valueLog2-fold change
8.1888 × 10-41.3
AT2G43510'low light; wild type' vs 'control; wild type'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
9.1836 × 10-4-1.3
AT2G43510'Ler x C24 F1 hybrid' vs 'Landsberg erecta ecotype'genotypeTranscription profiling by high throughput sequencing of Arabidopsis Ler and C24 ecotypes and their reciprocal hybrids
Adjusted p-valueLog2-fold change
1.1996 × 10-3-1.3
AT2G43510'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
2.5973 × 10-31.3
AT2G43510'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
3.3033 × 10-3-1.3
AT2G43510'beta-estradiol; CHLM overexpression' vs 'beta-estradiol; control'compound, phenotypeExpression data from Arabidopsis thaliana seedlings with altered enzymes activity of the tetrapyrrole biosynthesis pathway
Adjusted p-valueLog2-fold change
3.4212 × 10-3-1.3
AT2G43510'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.5451 × 10-31.3
AT2G43510'20% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature'growth conditionTranscription profiling by array of Arabidopsis after growth at different temperatures
Adjusted p-valueLog2-fold change
3.6096 × 10-31.3
AT2G43510'abscisic acid and dimethylthiourea' vs 'ethanol'compoundTranscription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea
Adjusted p-valueLog2-fold change
3.6767 × 10-31.3
AT2G43510'bru1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for bru1
Adjusted p-valueLog2-fold change
6.4067 × 10-31.3
AT2G43510'dcl2-1 mutant' vs 'wild type' in 'Col-0'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for dcl1, dcl2, hen1, hst, hyl1, rdr1, rdr2, or rdr6
Adjusted p-valueLog2-fold change
6.9207 × 10-3-1.3
AT2G43510'brm-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis ga1-3 mutants, brm-1 mutants and ga1-3, brm-1 double mutants
Adjusted p-valueLog2-fold change
8.374 × 10-3-1.3
AT2G43510'rrd2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis temperature-dependent later root fasciation mutants
Adjusted p-valueLog2-fold change
9.3576 × 10-31.3
AT2G43510'pnp1-1' vs 'wild type' in 'full nutrient medium' at '168 hour'genotype, growth condition, timeTranscription profiling by array of Arabidopsis mutant for pnp after phosphate deprivation
Adjusted p-valueLog2-fold change
9.4339 × 10-31.3
AT2G43510'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.039 × 10-2-1.3
AT2G43510'drought; abi1td' at '0 hour' vs 'drought; wild type' at '0 hour'environmental stress, genotype, timeTranscription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling
Adjusted p-valueLog2-fold change
1.3293 × 10-21.3
AT2G43510'OGs; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.5323 × 10-2-1.3
AT2G43510'dimethylthiourea' vs 'ethanol'compoundTranscription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea
Adjusted p-valueLog2-fold change
1.5484 × 10-2-1.3
AT2G43510'ire1a/ire1b' vs 'wild type' in 'tunicamycin 5 milligram per liter'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ire1 after treatment with tunicamycin
Adjusted p-valueLog2-fold change
1.9763 × 10-21.3
AT2G43510'edr1 mutant' vs 'wild type' in 'Golovinomyces cichoracearum' at '36 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for edr1 after infection with Golovinomyces cichoracearum
Adjusted p-valueLog2-fold change
2.9451 × 10-21.3
AT2G43510'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.5033 × 10-21.3
AT2G43510'wild type; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
4.7096 × 10-21.3
AT2G43510'ahk2/ahk3 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis ahk mutants
Adjusted p-valueLog2-fold change
1.1635 × 10-71.2
AT2G43510'Col-0 x Sei-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
1.2728 × 10-61.2
AT2G43510'bleomycin' vs 'none'stimulusTranscription profiling by array of Arabidopsis seedlings grown after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment to identify synergistically induced defence genes
Adjusted p-valueLog2-fold change
2.667 × 10-61.2
AT2G43510'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'none' at '0 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
4.9472 × 10-61.2
AT2G43510'lec1-1 mutant' vs 'wild type' in '8 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
2.1808 × 10-51.2
AT2G43510'lec1-1 mutant' vs 'wild type' in '12 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
3.1014 × 10-51.2
AT2G43510'actin2-5' vs 'wild type'genotypeActin Cytoskeleton Integrates Auxin and Brassinosteroid Signaling in Plants.
Adjusted p-valueLog2-fold change
3.5289 × 10-51.2
AT2G43510'mbd4 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
8.0835 × 10-51.2
AT2G43510'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '6 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
2.3694 × 10-41.2
AT2G43510'powdery mildew' vs 'none' in 'pmr4-1'genotype, infectTranscription profiling of Arabidopsis callose synthase deficient (pmr4-1) mutant and wild type plants infected with powdery mildew
Adjusted p-valueLog2-fold change
4.9175 × 10-41.2
AT2G43510'wrky33 mutant; Botrytis cinerea 2100' vs 'wrky33 mutant; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
5.7072 × 10-4-1.2
AT2G43510'essp3 and brm mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis seedlings mutant for essp3 and brm
Adjusted p-valueLog2-fold change
1.2546 × 10-3-1.2
AT2G43510'coi1-2 mutant' vs 'wild type genotype' in 'Sclerotinia sclerotiorum' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
2.2416 × 10-31.2
AT2G43510'abscisic acids; 50 micromolar' vs 'none' in 'nup85 loss of function mutant'compound, genotypeAn Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress
Adjusted p-valueLog2-fold change
2.3718 × 10-3-1.2
AT2G43510'hog1-7 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis polyploidy-associated transcriptional gene silencing (paTGS) mutants ddm1-12 and hog1-7 against wild type controls
Adjusted p-valueLog2-fold change
2.5263 × 10-3-1.2
AT2G43510'Ler x C24 F1 hybrid' vs 'Ler'genotypeTranscription profiling by high throughput sequencing of Arabidopsis F1 hybrids from crosses between C24, Landsberg erecta (Ler) and Columbia (Col)
Adjusted p-valueLog2-fold change
2.7508 × 10-3-1.2
AT2G43510'antimycin A; 50 micromolar' vs 'water' in 'rao1-1 mutant'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
4.0127 × 10-31.2
AT2G43510'anac017 loss of function mutant' vs 'wild type genotype'genotypeRegulatory inversion in NAC networks steers the timing of age-dependent cell death in plants [RNA-Seq]
Adjusted p-valueLog2-fold change
4.899 × 10-3-1.2
AT2G43510'iron deprivation' vs. 'control' at '24 hours' in 'shoot' of 'Kas-1' ecotypeecotype, organism part, growth condition, timeTranscription profiling by array of Arabidopsis Kas-1 and Tsu-1 grown in iron-deficient medium
Adjusted p-valueLog2-fold change
8.8825 × 10-3-1.2
AT2G43510'serrate-1 mutant' vs 'wild type'genotypeTranscription profiling by array of serrate-1 mutant Arabidopsis seedlings
Adjusted p-valueLog2-fold change
9.2793 × 10-31.2
AT2G43510'methyl jasmonate 0.1 micromolar' vs 'none' in 'jin1-9'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for myc2 after treatment with methyl jasmonate
Adjusted p-valueLog2-fold change
1.0944 × 10-21.2
AT2G43510'AFB1 overexpression; Pseudomonas syringae pv. tomato DC3000' vs 'AFB1 overexpression; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
1.1133 × 10-21.2
AT2G43510'variegation msh1' vs 'wild type'RNA interferenceTranscript profiling of Arabidopsis msh1 mutants
Adjusted p-valueLog2-fold change
1.1295 × 10-2-1.2
AT2G43510'cry1' vs 'wild type' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for cry1 or hy5 after growth in high light or blue light
Adjusted p-valueLog2-fold change
1.2471 × 10-21.2
AT2G43510'mil4 mutant' vs 'wild type' in 'benzothiadiazole'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for mil4 and/or sid2 after treatment with benzothiadiazole
Adjusted p-valueLog2-fold change
1.2991 × 10-2-1.2
AT2G43510'iron; 100 micromolar' vs 'none' in 'wild type; shoot'compound, genotype, organism partExpression data from Arabidopsis roots and shoots grown with or without iron
Adjusted p-valueLog2-fold change
2.248 × 10-21.2
AT2G43510'camta1/2/3 mutant; grown at 22 C and treated at 4 C for 24 hours' vs 'wild type; grown at 22 C and treated at 4 C for 24 hours'genotype, growth conditionExpression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants
Adjusted p-valueLog2-fold change
3.248 × 10-2-1.2
AT2G43510'protoplasting' vs 'control'treatmentTranscription profiling by array of Arabidopsis protoplasted root cells after iron deprivation
Adjusted p-valueLog2-fold change
4.6325 × 10-21.2
AT2G43510'nutrient solution with caesium; root' vs 'control; root'growth condition, organism partTranscription profiling by array of Arabidopsis after potassium starvation or treatment with caesium
Adjusted p-valueLog2-fold change
1.2351 × 10-22-1.1
AT2G43510'4 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
4.4962 × 10-14-1.1
AT2G43510'atprmt5 mutant' vs 'wild type genotype'genotypeAtPRMT5 regulates shoot regeneration through modulating multiple genes expression analyzed by RNA-seq
Adjusted p-valueLog2-fold change
2.353 × 10-101.1
AT2G43510'bli-1 -/-; ire1a -/-' vs 'wild type genotype'genotypeBLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.7594 × 10-91.1
AT2G43510'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.1342 × 10-81.1
AT2G43510'Pseudomonas syringae DC3000' vs 'axenic plant' at '2 day'growth condition, infect, sampling time pointLeaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
Adjusted p-valueLog2-fold change
1.1749 × 10-81.1
AT2G43510'drought environment' vs 'normal watering' in 'wild type genotype'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.0705 × 10-51.1
AT2G43510'Laccaria bicolor' vs 'none'infectTranscription profiling of Arabidopsis thaliana leaves as reaction to fungi (Laccaria bicolor) infection of the roots
Adjusted p-valueLog2-fold change
1.8653 × 10-51.1
AT2G43510'benzothiadiazole' vs 'control'growth conditionTranscription profiling by array of Arabidopsis overexpressing mil4 after treatment with benzothiadiazole
Adjusted p-valueLog2-fold change
3.0706 × 10-41.1
AT2G43510'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Sha'compound, ecotype, timeTranscription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
2.1478 × 10-31.1
AT2G43510'synthetic strigolactone GR24 10 micromolar' vs 'DMSO'compoundTranscription profiling by array of Arabidopsis thaliana seedlings treated with CTL-VI or GR24
Adjusted p-valueLog2-fold change
2.3013 × 10-31.1
AT2G43510'fbl17-1 (GK_170-E02)' vs 'wild type genotype'genotypeRNAseq analysis of Arabidopsis Col-0 wild-type and fbl17 mutant seedlings
Adjusted p-valueLog2-fold change
2.8928 × 10-3-1.1
AT2G43510'Ler x C24 F1 hybrid' vs 'C24 ecotype'genotypeTranscription profiling by high throughput sequencing of Arabidopsis Ler and C24 ecotypes and their reciprocal hybrids
Adjusted p-valueLog2-fold change
3.4259 × 10-31.1
AT2G43510'Methylobacterium extorquens PA1 colonization; Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day'growth condition, infect, sampling time pointLeaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
Adjusted p-valueLog2-fold change
3.4997 × 10-31.1
AT2G43510'des1-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis des1-1 mutants
Adjusted p-valueLog2-fold change
5.0002 × 10-31.1
AT2G43510'arsenic; 100 micromolar' vs 'none' in 'Col-0'compound, ecotypeTranscriptome profiling identified genes and pathways associated with arsenic toxicity and tolerance in Arabidopsis
Adjusted p-valueLog2-fold change
6.7723 × 10-31.1
AT2G43510'rhd2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for rhd2/ArtbohC
Adjusted p-valueLog2-fold change
7.1186 × 10-3-1.1
AT2G43510'none; atpao5-3 mutant' vs 'none; wild type genotype'compound, genotypeTranscription profiling by array of Arabidopsis wild type and polyamine oxidase 5 loss-of-function mutant exposed to sodium chloride
Adjusted p-valueLog2-fold change
9.149 × 10-31.1
AT2G43510'methyl jasmonate 0.1 micromolar' vs 'none' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for myc2 after treatment with methyl jasmonate
Adjusted p-valueLog2-fold change
9.8084 × 10-3-1.1
AT2G43510'short (8 hour) days at 20 degrees celsius' vs 'long (16 hour) days at 20 degrees celsius' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis ft-1 mutants
Adjusted p-valueLog2-fold change
1.9926 × 10-21.1
AT2G43510'ein2-1; untreated' at '0 hour' vs 'wild type; untreated' at '0 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
2.2104 × 10-21.1
AT2G43510'8h semi-in vivo pollen tube' vs '4h pollen tube'growth condition, timeTranscription profiling by array of Arabidopsis pollen and pollen tubes grown in vitro and in vivo
Adjusted p-valueLog2-fold change
3.1832 × 10-21.1
AT2G43510'3% mannitol' at '4 hour' vs 'control' at '0 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid
Adjusted p-valueLog2-fold change
4.1502 × 10-2-1.1
AT2G43510'coi1 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
4.8789 × 10-2-1.1
AT2G43510'PAP, 100 micromolar; lithium chloride, 100 millimolar; ATP, 1 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
9.7456 × 10-71
AT2G43510'rlk1 mutant' vs 'wild type' in 'water'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for rlk1 after treatment with chitooctaose
Adjusted p-valueLog2-fold change
2.5819 × 10-51
AT2G43510'drought environment' vs 'none' in 'ahl10-1'environmental stress, genotypeTranscriptome analysis using RNA sequencing conducted for Arabidopsis thaliana Col-0 wild type and ahl10-1 mutant in response to low water potential (drought environment)
Adjusted p-valueLog2-fold change
2.5938 × 10-5-1
AT2G43510'hos1-3 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis hos1-3 seedlings
Adjusted p-valueLog2-fold change
2.8652 × 10-51
AT2G43510'35 micromolar; N-lauroylethanolamine (NAE(12:0))' vs '0.05 percent; DMSO'compoundTranscription profiling of Arabidopsis seedlings treated with NAE(12:0)
Adjusted p-valueLog2-fold change
3.4564 × 10-5-1
AT2G43510'Sei-0 x Col-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '2 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
3.3485 × 10-4-1
AT2G43510'pif1pif3pif4pif5 (pifq) mutant' vs 'wild type' in 'seedling; darkness'developmental stage, genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for pif1, pif3, pif4 and pif5 after growth in darkness or red light
Adjusted p-valueLog2-fold change
6.251 × 10-4-1
AT2G43510'sd1-29' vs 'wild type genotype' in '3-OH-FA; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.4619 × 10-31
AT2G43510'bhlh100/101 double mutant' vs 'wild type' in 'none; root'compound, genotype, organism partExpression data from Arabidopsis roots and shoots grown with or without iron
Adjusted p-valueLog2-fold change
1.6139 × 10-31
AT2G43510'bzr1-1D;bri1-116 double mutant' vs 'bri1-116 null mutant'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
2.1717 × 10-31
AT2G43510'Pseudomonas syringae DC3000 COR-avrPphB strain' vs 'mock' in 'wild type'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
2.4591 × 10-31
AT2G43510'GVGdvl4' vs 'control' in 'dexamethasone'compound, genotypeTranscription profiling by array of Arabidopsis overexpressing dvl4 after treatment with dexamethasone
Adjusted p-valueLog2-fold change
2.8673 × 10-3-1
AT2G43510'ubc13-/- mutant' vs 'wild type' in 'iron deprivation'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ubc13A or expressing cucumber CsUBC13 under the control of the 35S promoter after iron deprivation
Adjusted p-valueLog2-fold change
3.826 × 10-3-1
AT2G43510'chitin' vs 'none' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin
Adjusted p-valueLog2-fold change
5.4004 × 10-3-1
AT2G43510'hyl1 mutant' vs 'wild type' in 'Col-0'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for dcl1, dcl2, hen1, hst, hyl1, rdr1, rdr2, or rdr6
Adjusted p-valueLog2-fold change
7.7641 × 10-31
AT2G43510'osmotic stress (3h with 0.3 molar mannitol)' vs 'control' in 'leaf'growth condition, organism partTranscriptome Profiling of Roots and leaves Under High Osmotic Stress in Arabidopsis
Adjusted p-valueLog2-fold change
7.7902 × 10-31
AT2G43510'T-DNA knock out line 2' vs 'wild type' in 'Nd-1'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for At2g19270
Adjusted p-valueLog2-fold change
8.5867 × 10-3-1
AT2G43510'dexamethasone and cycloheximide' vs 'control'treatmentTranscription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts
Adjusted p-valueLog2-fold change
9.6629 × 10-3-1
AT2G43510'DCC1 mutant' vs 'wild type genotype'genotypeThioredoxin DCC1 regulates shoot regeneration through modulating multiple genes expression by RNA-seq analyses in Arabidopsis
Adjusted p-valueLog2-fold change
9.9809 × 10-3-1
AT2G43510'indole-3-acetic acid;3 hour' vs 'indole-3-acetic acid; 1 hour' in 'Bur-0'compound, ecotype, timeTranscription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
1.2727 × 10-21
AT2G43510'stunted msh1' vs 'wild type'RNA interferenceTranscript profiling of Arabidopsis msh1 mutants
Adjusted p-valueLog2-fold change
1.8313 × 10-21
AT2G43510'shoot; recovery, 10 day phosphate starvation then recovery for 3 days' vs 'shoot; mock'organism part, treatmentThe response and recovery of Arabidopsis thaliana transcriptome to phosphate starvation [ATH1-121501]
Adjusted p-valueLog2-fold change
2.0135 × 10-21
AT2G43510'MYB96 overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing MYB96 or myb96 knock out mutants
Adjusted p-valueLog2-fold change
2.2417 × 10-21
AT2G43510'35 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
2.7514 × 10-21
AT2G43510'lipopolysaccharide 100ug/ml' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
3.6592 × 10-21
AT2G43510'jasmonic acid; low red/far-red ratio' vs 'mock; low red/far-red ratio'compound, treatmentExpression data from low Red:Far-Red ratio and Jasmonic Acid crosstalk in Arabidopsis
Adjusted p-valueLog2-fold change
3.7624 × 10-21
AT2G43510'wild_type; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
3.8725 × 10-21
AT2G43510'ga1-3 gai-t6 rga-t2 rgl1-1 rgl2-1' vs 'wild type' in 'Alternaria brassicicola' at '72 hour'genotype, time, treatmentTranscription profiling by array of Arabidopsis DELLA mutants after treatment with flg22, methyl jasmonate, Alternaria brassicicola or Pseudomonas syringae pv. tomato DC3000