7.2 | | AT3G01290 | 'cycloheximide' vs 'mock' | treatment | Transcription profiling of Arabidopsis WUSCHEL targets |
6.8 | | AT3G01290 | '12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
6.7 | | AT3G01290 | '12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
6.7 | | AT3G01290 | 'Te; 350 ppb ozone exposure for 2hr' vs 'Te; control' | genotype, treatment | Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana |
-6.7 | | AT3G01290 | '2 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
6.5 | | AT3G01290 | '12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
6.5 | | AT3G01290 | ''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 6 hour' vs 'none; 0 hour' in 'wild type genotype' | genotype, infect, time | Expression profiling of Col-0 and rps2 treated with Psm:AvrRpt2 |
6.5 | | AT3G01290 | 'cycloheximide, dexamethasone' vs 'mock' | treatment | Transcription profiling of Arabidopsis WUSCHEL targets |
-6.5 | | AT3G01290 | 'flg22; 100 nanomolar; 60 minute' vs 'none; 8 minute' in 'jar1-1' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
6.4 | | AT3G01290 | ''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 10 hour' vs 'none; 0 hour' in 'wild type genotype' | genotype, infect, time | Expression profiling of Col-0 and rps2 treated with Psm:AvrRpt2 |
-6.4 | | AT3G01290 | 'flg22; 100 nanomolar; 45 minute' vs 'none; 8 minute' in 'ein2-5' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
-6.4 | | AT3G01290 | 'flg22; 100 nanomolar; 60 minute' vs 'none; 8 minute' in 'ein2-5' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
6.3 | | AT3G01290 | '350 ppb ozone exposure for 2hr' vs 'control' in 'coi1-16 ein2 sid2' | genotype, growth condition | RNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling |
-6.3 | | AT3G01290 | 'flg22; 100 nanomolar; 45 minute' vs 'none; 8 minute' in 'jar1-1' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
-6.3 | | AT3G01290 | 'flg22; 100 nanomolar; 120 minute' vs 'none; 8 minute' in 'jar1-1' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
-6.3 | | AT3G01290 | 'flg22; 100 nanomolar; 120 minute' vs 'none; 8 minute' in 'ein2-5' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
-6.2 | | AT3G01290 | 'flg22; 100 nanomolar; 180 minute' vs 'none; 8 minute' in 'jar1-1' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
6.1 | | AT3G01290 | '350 ppb ozone exposure for 2hr' vs 'none' in 'wrky25, wrky33 double mutant' | environmental stress, genotype | Transcription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment |
-6 | | AT3G01290 | 'salt and heat stress' vs 'none' | environmental stress | Transcription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress |
6 | | AT3G01290 | 'KZ-10 x Mrk-0' vs 'Mrk-0' | ecotype | Transcription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents |
-5.9 | | AT3G01290 | '1 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
5.9 | | AT3G01290 | '12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
5.8 | | AT3G01290 | '18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
5.7 | | AT3G01290 | 'ozone; 350 nanoliter' vs 'none' in 'Cvi-0' | compound, ecotype | Transcriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity. |
-5.6 | | AT3G01290 | 'flg22; 100 nanomolar; 120 minute' vs 'none; 8 minute' in 'npr1-1' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
-5.5 | | AT3G01290 | 'water deprivation' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after water deprivation |
5.4 | | AT3G01290 | 'pho1 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis phosphate deficient mutant pho1 |
-5.3 | | AT3G01290 | '14 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
-5.3 | | AT3G01290 | 'drought environment' vs 'normal watering' in 'wild type genotype' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
5.2 | | AT3G01290 | 'Pseudomonas syringae pv tomato DC3000(avrRpt2)' vs 'none' in 'gh3.5-1D heterozygous mutant' | genotype, infect | Transcription profiling by array of Arabidopsis heterozygous mutant for gh3.5 after inoculation with Pseudomonas syringae pv tomato DC3000(avrRpt2) against wild type counterparts and uninfected controls |
-5.2 | | AT3G01290 | 'flg22; 100 nanomolar; 180 minute' vs 'none; 8 minute' in 'ein2-5' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
5.1 | | AT3G01290 | '350 ppb ozone exposure for 2hr' vs 'control' in 'tga2 tga5 tga6' | genotype, growth condition | RNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling |
-5.1 | | AT3G01290 | 'drought environment' vs 'normal watering' in 'vtc2 mutant' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
5.1 | | AT3G01290 | '350 ppb ozone exposure for 2hr' vs 'none' in 'wild type' | environmental stress, genotype | Transcription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment |
-4.9 | | AT3G01290 | 'heat stress' vs 'none' | environmental stress | Transcription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress |
4.9 | | AT3G01290 | '350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for coi1-16 ein2 sid2' | genotype, growth condition | RNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling |
4.9 | | AT3G01290 | 'Col-0; 350 ppb ozone exposure for 2hr' vs 'Col-0; control' | genotype, treatment | Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana |
4.9 | | AT3G01290 | "rps10 RNAi; late onset of silencing (P3)" vs "none; wild type" | RNA interference, phenotype | Microarray data sets of Arabidopsis rps10 mutants with RNAi-silenced expression of mitoribosomal S10 protein |
4.8 | | AT3G01290 | 'cycloheximide' vs 'dimethyl sulfoxide' in '60 micromolar' | compound | Transcription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes |
4.8 | | AT3G01290 | 'Plectosphaerella cucumerina inoculation' vs 'control' in 'agb1-1 mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina |
4.7 | | AT3G01290 | '350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for tga2 tga5 tga6' | genotype, growth condition | RNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling |
4.7 | | AT3G01290 | 'CT101; 350 ppb ozone exposure for 2hr' vs 'CT101; control' | genotype, treatment | Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana |
4.7 | | AT3G01290 | '350 ppb ozone exposure for 2hr' vs 'none' in 'wrky75 mutant' | environmental stress, genotype | Transcription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment |
4.7 | | AT3G01290 | 'cycloheximide (60 micromolar) and dexamethasone (60 micromolar)' vs 'dimethyl sulfoxide; 60 micromolar' | compound | Transcription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes |
-4.6 | | AT3G01290 | 'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '8 hour' | phenotype, time | Transcription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response |
-4.6 | | AT3G01290 | 'flg22; 100 nanomolar; 180 minute' vs 'none; 8 minute' in 'npr1-1' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
4.5 | | AT3G01290 | 'ozone; 350 nanoliter' vs 'none' in 'Shahdara' | compound, ecotype | Transcriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity. |
4.5 | | AT3G01290 | 'Plectosphaerella cucumerina inoculation' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina |
4.4 | | AT3G01290 | '1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '3 hour' | time, treatment | Transcription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening) |
4.4 | | AT3G01290 | '1 micromolar salicylic acid at ZT24' vs 'water at ZT24' at '3 hour' | time, treatment | Transcription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening) |
-4.4 | | AT3G01290 | 'flg22; 100 nanomolar; 45 minute' vs 'none; 8 minute' in 'npr1-1' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
-4.2 | | AT3G01290 | '4 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
4.1 | | AT3G01290 | '18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
4.1 | | AT3G01290 | '9 hr hypoxia' vs '9 hr control' in 'polysomal mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
4.1 | | AT3G01290 | 'KZ-10 x Mrk-0' vs 'KZ-10' | ecotype | Transcription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents |
-4.1 | | AT3G01290 | 'microRNA targeting Umkirch-3 allele of At5g41750' vs 'control' | genotype | Transcription profiling of Arabidopsis Umkirch-1/Umkirch-3 hybrid plants compared to siblings carrying a microRNA targeting the Umkirch-3 allele of At5g41750 |
4 | | AT3G01290 | 'ANAC017 OEb' vs 'wild type genotype' at '1 day' | genotype, time | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
4 | | AT3G01290 | 'ANAC017 OEa' vs 'wild type genotype' at '1 day' | genotype, time | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
-4 | | AT3G01290 | 'flg22; 100 nanomolar; 60 minute' vs 'none; 8 minute' in 'npr1-1' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
4 | | AT3G01290 | 'mkk1;mkk2 knockout; none' vs 'wild_type; none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH |
3.9 | | AT3G01290 | 'pdx3-3 mutant' vs 'wild type' | genotype | Transcription profiling by high throughput sequencing of Arabidopsis pdx3 mutant plants |
3.9 | | AT3G01290 | 'Mir-0 x Se-0' vs 'Mir-0' | ecotype | Transcription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents |
-3.9 | | AT3G01290 | '3 percent glucose' vs 'none' | compound | Transcription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions |
3.9 | | AT3G01290 | 'pvip1;pvip2' vs 'none' | rnai, RNA interference | Transcription profiling by array of Arabidopsis after RNAi-mediated knock-down of pvip1 and pvip2 |
-3.9 | | AT3G01290 | 'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '24 hour' | phenotype, time | Transcription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response |
3.9 | | AT3G01290 | 'Zat10 overexpression' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing Zat10 under the control of the 35S promoter |
-3.9 | | AT3G01290 | 'flg22; 100 nanomolar; 180 minute' vs 'none; 8 minute' in 'wild type genotype' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
3.8 | | AT3G01290 | 'pdx3-4 mutant' vs 'wild type' | genotype | Transcription profiling by high throughput sequencing of Arabidopsis pdx3 mutant plants |
-3.8 | | AT3G01290 | '3 percent glucose and 1 micromolar indole-3-acetic acid' vs 'none' | compound | Transcription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions |
-3.8 | | AT3G01290 | 'homozygous AtCesA4' vs 'heterozygous AtCesA4' | genotype | Transcription profiling by array of Arabidopsis cellulose synthase mutants |
3.8 | | AT3G01290 | 'pvip1; pvip2 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for pvip1 and pvip2 |
-3.8 | | AT3G01290 | 'flg22; 100 nanomolar; 120 minute' vs 'none; 8 minute' in 'wild type genotype' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
3.7 | | AT3G01290 | '18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
3.7 | | AT3G01290 | 'siz1-3' vs 'wild type' in 'drought' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for siz1 after exposure to drought |
3.7 | | AT3G01290 | 'rps2 mutant' vs 'wild type genotype' in 'none' at '0 hour' | genotype, infect, time | Expression profiling of Col-0 and rps2 treated with Psm:AvrRpt2 |
3.6 | | AT3G01290 | 'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
3.6 | | AT3G01290 | 'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
3.6 | | AT3G01290 | 'constant darkness' vs 'constant white light' in 'leaf without petiole' | growth condition, organism part | Transcription profiling by array of Arabidopsis subjected to far-red light pulse treatment |
3.6 | | AT3G01290 | 'eds16 mutant; Golovinomyces orontii infection' vs 'eds16 mutant; no infection' at 7 day | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii |
-3.6 | | AT3G01290 | 'water deprivation' vs 'control' in 'pKYL71-35S::InsP5-ptase (line “T8”)' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation |
3.6 | | AT3G01290 | 'Col-0; flg22' vs 'Col-0; none' | compound, genotype | Transcription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6 |
-3.6 | | AT3G01290 | 'flg22; 100 nanomolar; 45 minute' vs 'none; 8 minute' in 'wild type genotype' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
-3.5 | | AT3G01290 | 'drought environment' vs 'normal watering' in 'vtc2.5 mutant' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
3.5 | | AT3G01290 | '18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
3.5 | | AT3G01290 | 'S-nitrosocysteine; 1 millimolar' vs 'buffer' | compound | Transcription profiling by high throughput sequencing of Arabidopsis leaf samples infiltrated with S-nitrosocysteine (CysNO) |
-3.5 | | AT3G01290 | 'Meloidogyne incognita infested region' vs 'Meloidogyne incognita non-infested region' at '14 day' | sampling site, time | Transcription profiling by array of Arabidopsis root cells infested with Meloidogyne incognita 14 or 21 days after inoculation |
3.5 | | AT3G01290 | "rps10 RNAi; early onset of silencing (P2)" vs "none; wild type" | RNA interference, phenotype | Microarray data sets of Arabidopsis rps10 mutants with RNAi-silenced expression of mitoribosomal S10 protein |
3.5 | | AT3G01290 | 'wild type; Golovinomyces orontii infection' vs 'wild type; no infection' at 7 day | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii |
3.5 | | AT3G01290 | '35S::ERF104; none' vs 'Col-0; none' | compound, genotype | Transcription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6 |
-3.4 | | AT3G01290 | 'paclobutrazol; 20 micromolar' vs 'none' in 'endosperm' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
-3.4 | | AT3G01290 | 'abscisic acid; 20 micromolar' vs 'none' in 'endosperm' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
3.4 | | AT3G01290 | 'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf' | developmental stage, infect, organism part, stimulus | RNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive) |
3.4 | | AT3G01290 | 'Cal-0' vs 'Col-4' | ecotype | Transcription profiling by array of Arabidopsis Col-4 and Cal-0 ecotypes |
3.3 | | AT3G01290 | 'constant darkness' vs 'constant white light' in 'petiole' | growth condition, organism part | Transcription profiling by array of Arabidopsis subjected to far-red light pulse treatment |
3.3 | | AT3G01290 | 'cabbage leaf curl virus infected' vs 'mock infected' | infect | Transcription profiling by array of Arabidopsis infected with geminivirus Cabbage leaf curl virus |
3.2 | | AT3G01290 | '24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
3.2 | | AT3G01290 | 'wild type; Pseudomonas syringae pv. maculicola str. ES4326' vs 'wild type; mock' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance |
-3.2 | | AT3G01290 | 'tcx2; TMO5:3xGFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
3.2 | | AT3G01290 | '50 micromolar antimycin A' vs 'none' | treatment | Expression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue |
-3.2 | | AT3G01290 | '3% glucose; 0.1% epibrassinolide' vs 'none' | growth condition | Genome wide analysis of glucose brassinosteroid interaction in Arabidopsis |
3.2 | | AT3G01290 | 'far-red light pulse followed by darkness' vs 'constant white light' in 'leaf without petiole' | growth condition, organism part | Transcription profiling by array of Arabidopsis subjected to far-red light pulse treatment |
-3.2 | | AT3G01290 | 'Meloidogyne incognita infested region' vs 'Meloidogyne incognita non-infested region' at '21 day' | sampling site, time | Transcription profiling by array of Arabidopsis root cells infested with Meloidogyne incognita 14 or 21 days after inoculation |
-3.2 | | AT3G01290 | 'water deprivation' vs 'control' in 'pKYL71-35S::InsP5-ptase (line “T6”)' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation |
3.1 | | AT3G01290 | 'wild type; Botrytis cinerea 2100' vs 'wild type; mock' | genotype, infect | WRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation |
3.1 | | AT3G01290 | '24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
3.1 | | AT3G01290 | 'wrky33 mutant; Botrytis cinerea 2100' vs 'wrky33 mutant; mock' | genotype, infect | WRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation |
3.1 | | AT3G01290 | 'wild type; Pseudomonas syringae pv. tomato DC3000' vs 'wild type; none' | genotype, infect | Transcription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000 |
-3.1 | | AT3G01290 | 'water deprivation' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation |
3.1 | | AT3G01290 | 'HrpZ 10uM' vs 'water' at '4 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1 |
3.1 | | AT3G01290 | 'ceh1 mutant' vs 'wild type' | genotype | Transcriptome of Arabidopsis thaliana ceh1 mutant |
-3 | | AT3G01290 | '10 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
-3 | | AT3G01290 | 'flg22; 100 nanomolar; 15 minute' vs 'none; 8 minute' in 'npr1-1' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
3 | | AT3G01290 | 'ozone' vs 'control' in 'wild type' at '3 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis G-protein knockout plants in response to ozone |
-2.9 | | AT3G01290 | 'ref4-3; cdk8-1' vs 'wild type genotype' | genotype | Gene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1 |
2.9 | | AT3G01290 | 'Mir-0 x Se-0' vs 'Se-0' | ecotype | Transcription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents |
2.9 | | AT3G01290 | 'camta1/2/3 mutant; grown at 22 C and treated at 4 C for 24 hours' vs 'wild type; grown at 22 C and treated at 4 C for 24 hours' | genotype, growth condition | Expression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants |
2.9 | | AT3G01290 | 'Blumeria graminis f.sp. hordei' vs 'none' in 'ataf1-1' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei |
-2.9 | | AT3G01290 | 'paclobutrazol; 20 micromolar' vs 'none' in 'embryo' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
2.9 | | AT3G01290 | 'Sclerotinia sclerotiorum' vs 'none' in 'coi1-2 mutant' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
2.9 | | AT3G01290 | 'Pseudomonas syringae pv tomato DC3000(avrRpt2)' vs 'none' in 'wild type genotype' | genotype, infect | Transcription profiling by array of Arabidopsis heterozygous mutant for gh3.5 after inoculation with Pseudomonas syringae pv tomato DC3000(avrRpt2) against wild type counterparts and uninfected controls |
2.9 | | AT3G01290 | 'GST-NPP1 1uM' vs 'water' at '4 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1 |
2.9 | | AT3G01290 | 'ozone' vs 'control' in 'G-protein knockout mutant' at '3 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis G-protein knockout plants in response to ozone |
2.9 | | AT3G01290 | 'erf104 knockout; none' vs 'Col-0; none' | compound, genotype | Transcription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6 |
2.8 | | AT3G01290 | 'Bla-1 x Hh-0' vs 'Bla-1' | ecotype | Transcription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents |
2.8 | | AT3G01290 | 'camta1/2/3 mutant; grown at 22 C' vs 'wild type; grown at 22 C' | genotype, growth condition | Expression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants |
-2.8 | | AT3G01290 | 'csn3-1 mutant' vs 'wild type' in 'dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
2.8 | | AT3G01290 | 'ozone 500 parts per billion' vs 'control' | growth condition | Arabidopsis thaliana response to ozone |
2.8 | | AT3G01290 | 'ozone 500 parts per billion' vs 'control' | growth condition | Functional Genomics of Ozone Stress in Arabidopsis. |
2.8 | | AT3G01290 | 'mkk2 knockout; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'mkk2 knockout; none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH |
-2.8 | | AT3G01290 | 'flg22; 100 nanomolar; 15 minute' vs 'none; 8 minute' in 'ein2-5' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
2.8 | | AT3G01290 | 'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '12 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-2.8 | | AT3G01290 | 'serrate-1 mutant' vs 'wild type' | genotype | Transcription profiling by array of serrate-1 mutant Arabidopsis seedlings |
2.8 | | AT3G01290 | 'wild_type; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'wild_type; none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH |
2.7 | | AT3G01290 | '24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
-2.7 | | AT3G01290 | 'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '30 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
-2.7 | | AT3G01290 | 'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '30 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
2.7 | | AT3G01290 | '9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'polysomal mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
-2.7 | | AT3G01290 | 'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
-2.7 | | AT3G01290 | 'csn4-1 mutant' vs 'wild type' in 'dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
2.7 | | AT3G01290 | 'syringolin; 20 micromolar' vs 'none' in 'uninfected' at '8 to 12 hour' | compound, growth condition, time | Transcription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A |
2.7 | | AT3G01290 | 'powdery mildew infected' vs 'uninfected' in 'none' at '8 to 12 hour' | compound, growth condition, time | Transcription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A |
2.7 | | AT3G01290 | 'far-red light pulse followed by darkness' vs 'constant white light' in 'petiole' | growth condition, organism part | Transcription profiling by array of Arabidopsis subjected to far-red light pulse treatment |
2.6 | | AT3G01290 | 'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
2.6 | | AT3G01290 | 'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
2.6 | | AT3G01290 | 'ANAC017 OEa' vs 'wild type genotype' at '3 day' | genotype, time | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
-2.6 | | AT3G01290 | 'fmo1 mutant' vs 'wild type genotype' in 'pipecolic acid; 10 micromolar' | block, compound, genotype | Transcriptional response of Arabidopsis thaliana to exogenous application of pipecolic acid |
2.6 | | AT3G01290 | 'chr11-1, chr17-1 double mutant' vs 'wild type' at '8 day' | genotype, time | Transcription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture. |
-2.6 | | AT3G01290 | 'sodium chloride; 120 millimolar' vs 'control; 0 millimolar' in 'rsa1-1 mutant' at '24 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis rsa1-1 mutants under salt stress |
2.6 | | AT3G01290 | 'Pseudomonas syringae ES4326' vs 'none' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326 |
-2.5 | | AT3G01290 | 'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '30 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
-2.5 | | AT3G01290 | 'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '30 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
-2.5 | | AT3G01290 | 'ref8-1 mutant' vs 'wild type' | genotype | Transcription profiling by high throughput sequencing of Arabidospsis ref8-1, med5a/5b, and med5a/5b ref8-1 mutants |
2.5 | | AT3G01290 | '24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent' | genotype, infect, phenotype, time | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
2.5 | | AT3G01290 | 'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-1 mutant' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2 |
2.5 | | AT3G01290 | 'thaxtomin A treated' vs 'methanol treated (control)' | compound | Transcriptional profiling after inhibition of cellulose synthesis by thaxtomin and isoxaben in Arabidopsis thaliana suspension cells |
2.5 | | AT3G01290 | 'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-2 mutant' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2 |
2.5 | | AT3G01290 | 'cs26 mutant' vs 'wild type' in 'long day photoperiod' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods |
2.5 | | AT3G01290 | 'sid2-1 mutant; Pseudomonas syringae pv. maculicola str. ES4326' vs 'sid2-1 mutant; mock' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance |
-2.5 | | AT3G01290 | 'sodium chloride; 120 millimolar' vs 'control; 0 millimolar' in 'wild type' at '24 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis rsa1-1 mutants under salt stress |
2.5 | | AT3G01290 | 'phosphate deprivation' vs 'control' in 'wild type genotype; root' | genotype, growth condition, organism part | Transcription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation |
2.5 | | AT3G01290 | 'antimycin A; 50 micromolar; rao2_EMS_mutant' vs 'water; rao2_EMS_mutant' | compound, genotype | Transcription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals |
2.5 | | AT3G01290 | 'gir1 mutant; none' vs 'wild type; none' in 'flower' | compound, genotype, organism part | Gene expression profile in root and flower of gir1 mutant |
2.5 | | AT3G01290 | 'Flg-22 1uM' vs 'water' at '4 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1 |
2.5 | | AT3G01290 | 'ADEK1 calpian null' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing DEK1 calpain |
-2.4 | | AT3G01290 | 'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
2.4 | | AT3G01290 | 'pipecolic acid; 10 micromolar' vs 'none' in 'wild type genotype' | block, compound, genotype | Transcriptional response of Arabidopsis thaliana to exogenous application of pipecolic acid |
-2.4 | | AT3G01290 | 'lyk4/5' vs 'wild type genotype' in 'CO8; 1 millimolar' at '30 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
2.4 | | AT3G01290 | 'C24; 350 ppb ozone exposure for 2hr' vs 'C24; control' | genotype, treatment | Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana |
2.4 | | AT3G01290 | 'mechanical stimulus - water from spray bottle; 25 minute' vs 'none; 0 minute' in 'myc324' | genotype, stimulus, time | RNAseq analysis of early touch responses in myc234 mutants in Arabidopsis |
2.4 | | AT3G01290 | 'ANAC017 OEb' vs 'wild type genotype' at '3 day' | genotype, time | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
2.4 | | AT3G01290 | 'Blumeria graminis f.sp. hordei' vs 'none' in 'wild type' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei |
-2.4 | | AT3G01290 | 'ambient carbon dioxide 24h' vs 'ambient carbon dioxide 12h' | growth condition, organism part, time | Transcription profiling by array of Arabidopsis grown in ambient or elevated carbon dioxide at low light levels |
2.4 | | AT3G01290 | 'antimycin A; 50 micromolar; wild type' vs 'water; wild type' | compound, genotype | Transcription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals |
2.4 | | AT3G01290 | 'camta2/3 mutant; grown at 22 C' vs 'wild type; grown at 22 C' | genotype, growth condition | Expression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants |
2.4 | | AT3G01290 | '12h' vs '4h' | organism part, time | Transcription profiling by array of Arabidopsis grown in ambient carbon dioxide and ambient light |
2.4 | | AT3G01290 | 'tt4' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
2.4 | | AT3G01290 | 'Phytophthora infestans' vs 'none' in 'wild type' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-2.4 | | AT3G01290 | 'abscisic acid; 20 micromolar' vs 'none' in 'embryo' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
2.4 | | AT3G01290 | 'pao-1 mutant' vs 'wild type genotype' in 'continuous dark (no light) regimen' at '2 day' | environmental stress, genotype, time | Transcriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway |
2.4 | | AT3G01290 | 'Erysiphe orontii' vs 'none' at '120 hour' | infect, time | Transcription profiling by array of Arabidopsis after inoculation with Erysiphe orontii |
2.4 | | AT3G01290 | 'AFB1 overexpression; Pseudomonas syringae pv. tomato DC3000' vs 'AFB1 overexpression; none' | genotype, infect | Transcription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000 |
2.4 | | AT3G01290 | 'NaCl' vs 'control' in 'protophloem cells' | cell type, growth condition | Transcription profiling by array of Arabidopsis root cells after treatment with NaCl |
-2.4 | | AT3G01290 | 'pad4 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326 |
-2.4 | | AT3G01290 | 'control; abi1td' at '0 hour' vs 'control; wild type' at '0 hour' | environmental stress, genotype, time | Transcription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling |
2.4 | | AT3G01290 | '2-hexenal' vs 'mock' at '3 hour' | compound, time | Transcription profiling by array of Arabidopsis rosette leaves in response to aerial E-2-hexenal, one of the green leaf volatiles |
2.3 | | AT3G01290 | 'mechanical stimulus - water from spray bottle; 25 minute' vs 'none; 0 minute' in 'wild type genotype' | genotype, stimulus, time | RNAseq analysis of early touch responses in myc234 mutants in Arabidopsis |
2.3 | | AT3G01290 | 'abscisic acids; 50 micromolar' vs 'none' in 'nup85 loss of function mutant' | compound, genotype | An Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress |
2.3 | | AT3G01290 | 'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wild type' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2 |
2.3 | | AT3G01290 | '4.5 micromolar Naphtalenacetic acid and 50 micromolar antimycin A' vs 'none' | treatment | Expression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue |
2.3 | | AT3G01290 | '9 hr hypoxia' vs '9 hr control' in 'total mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
2.3 | | AT3G01290 | 'iron deprivation' vs. 'control' at '24 hours' in 'shoot' of 'Tsu-1' ecotype | ecotype, organism part, growth condition, time | Transcription profiling by array of Arabidopsis Kas-1 and Tsu-1 grown in iron-deficient medium |
2.3 | | AT3G01290 | 'ga1-3 mutant' vs 'wild type' in 'flower bud' | genotype, organism part | Transcription profiling of Arabidopsis seed and flowers of ga1-3 mutant |
2.3 | | AT3G01290 | 'Cax1/Cax3 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis cax1/cax3 double mutants |
2.3 | | AT3G01290 | 'mkk1 knockout; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'mkk1 knockout; none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH |
2.2 | | AT3G01290 | 'oligomycin' vs 'control' at '4 hour' | growth condition, time | Effect of oligomycin on transcript levels in Arabidopsis seedling cultures |
2.2 | | AT3G01290 | 'seed germinating in continuous light 48 h SL' vs 'seed germinating in continuous light 24 h SL' | growth condition | Transcription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination |
-2.2 | | AT3G01290 | 'arp6-1' vs 'wild type genotype' | genotype | Arabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition. [RNA-Seq] |
2.2 | | AT3G01290 | 'antimycin A; 50 micromolar; anac017-1' vs 'water; anac017-1' | compound, genotype | Transcription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals |
2.2 | | AT3G01290 | 'siz1-3' vs 'wild type' in 'control' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for siz1 after exposure to drought |
2.2 | | AT3G01290 | '12h' vs '4h' | organism part, time | Transcription profiling by array of Arabidopsis grown in elevated carbon dioxide levels in ambient light |
2.2 | | AT3G01290 | 'Phytophthera infestans' vs 'none' at '6 hour' | infect, time | Transcription profiling by array of Arabidopsis after infection with Phytophthera infestans |
2.2 | | AT3G01290 | 'Phytophthora infestans' vs 'none' in 'erp2D mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-2.2 | | AT3G01290 | 'npr1-3' vs 'wild type' in '3,5-dichloroanthranilic acid' at '2 day' | compound, genotype, time | Transcription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid |
-2.2 | | AT3G01290 | 'light pulse in the middle of the day' vs 'day time control' | growth condition | RNA-seq of Arabidopsis seedlings with or without light pulses treatment in the middle of day or night against untreated controls to study how the light pulses control the phase of the circadian clock |
-2.2 | | AT3G01290 | '3% glucose' at '4 hour' vs 'control' at '0 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid |
2.2 | | AT3G01290 | '3,5-dichloroanthranilic acid' vs 'none' in 'wild type' at '2 day' | compound, genotype, time | Transcription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid |
2.2 | | AT3G01290 | 'Phytophthora infestans' vs 'none' in 'erp140 mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-2.1 | | AT3G01290 | 'sd1-29' vs 'wild type genotype' in '3-OH-FA; 1 millimolar' at '30 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
-2.1 | | AT3G01290 | '24h' vs '12h' | organism part, time | Transcription profiling by array of Arabidopsis grown in ambient carbon dioxide and ambient light |
-2.1 | | AT3G01290 | 'efr-1; elf18' at '10 hour' vs 'wild type; elf18' at '10 hour' | genotype, time, treatment | Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2. |
2.1 | | AT3G01290 | 'bzr1-1D;bri1-116 double mutant' vs 'bri1-116 null mutant' | genotype | Transcription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only |
2.1 | | AT3G01290 | 'transgenic LeB4::AtHb1' vs 'wild type' in 'control' | genotype, growth condition | Expression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions |
2.1 | | AT3G01290 | 'vtc2' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for abi4 and/or vtc2 |
2.1 | | AT3G01290 | 'transgenics over expressing LecRKVI.2 (OH1)' vs 'wild type' | genotype | Transcriptome profiling of LecRKVI.2 over-expressor plants. |
-2.1 | | AT3G01290 | 'from low light to high light; wild type' vs 'control; wild type' | environmental stress, genotype | Transcription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light |
2.1 | | AT3G01290 | 'pap1-D/tt4' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
2.1 | | AT3G01290 | 'ambient carbon dioxide 12h' vs 'ambient carbon dioxide 4h' | growth condition, organism part, time | Transcription profiling by array of Arabidopsis grown in ambient or elevated carbon dioxide at low light levels |
2.1 | | AT3G01290 | 'flg22' vs 'water' at '1 hour' | compound, time | Transcription profiling by array of Arabidopsis after treatment with oligogalacturonides |
2.1 | | AT3G01290 | 'GO overexpression' vs 'wild type' in 'transferred to ambient CO2 concentration' at '8 hour' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis catalase mutant and plants expressing glycolate oxidase in chloroplasts transferred to ambient CO2 concentration |
2 | | AT3G01290 | 'mechanical stimulation' at '25 minute' vs 'none' | stimulus, time | RNAseq on touch-treated Arabidopsis thaliana plants |
-2 | | AT3G01290 | 'silver(1+) nitrate, 10 micromolar; N-benzyladenine, 3 micromolar' vs 'silver(1+) nitrate, 10 micromolar' | stimulus | Ethylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway. |
-2 | | AT3G01290 | '24h' vs '12h' | organism part, time | Transcription profiling by array of Arabidopsis grown in elevated carbon dioxide levels in ambient light |
2 | | AT3G01290 | 'Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day' | growth condition, infect, sampling time point | Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000 |
-2 | | AT3G01290 | 'arr22-ox' vs 'wild type' in 'none' | genotype, growth condition | Transcription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin |
2 | | AT3G01290 | 'abi4 vtc2' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for abi4 and/or vtc2 |
2 | | AT3G01290 | 'NOG1 knockdown by siRNA' vs 'none' in 'wild type genotype' | RNA interference, genotype | Transcriptome profiling of knock mutant and RNAi lines for small GTPase, nucleolar GTP-binding protein 1 (NOG1) in Arabidopsis |
2 | | AT3G01290 | 'primisulfuron' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after treatment with primisulfuron herbicide |
2 | | AT3G01290 | 'MYB12OX/tt4' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
-2 | | AT3G01290 | 'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '2 hour' | phenotype, time | Transcription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response |
2 | | AT3G01290 | 'apl mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis phloem from Altered Phloem Development (APL) mutants and wild type controls |
2 | | AT3G01290 | '2 hr hypoxia' vs '2 hr control' in 'polysomal mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
2 | | AT3G01290 | 'oligogalacturonide' vs 'water' at '1 hour' | compound, time | Transcription profiling by array of Arabidopsis after treatment with oligogalacturonides |
2 | | AT3G01290 | '2-hexenal' vs 'mock' at '1 hour' | compound, time | Transcription profiling by array of Arabidopsis rosette leaves in response to aerial E-2-hexenal, one of the green leaf volatiles |
2 | | AT3G01290 | '2,6-dichloroisonicotinic acid' vs 'none' in 'wild type' at '2 day' | compound, genotype, time | Transcription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid |
-2 | | AT3G01290 | 'abscisic acid' vs 'ethanol' | compound | Transcription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea |
2 | | AT3G01290 | 'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '12 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
2 | | AT3G01290 | 'salicylic acid' vs 'control' in 'npr1 sni1 mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for npr1, sni1, ssn2 and/or brca2a after treatment with salicylic acid |
1.9 | | AT3G01290 | 'hda5 mutant' vs 'wild type' | genotype | Transcription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants |
-1.9 | | AT3G01290 | 'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '180 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.9 | | AT3G01290 | 'salicylic acid; 0.5 millimolar' vs 'none' in 'wild type genotype' | compound, genotype | Salicylic acid-induced gene expression in wild-type Col-0 and mutant upl3-4 Arabidopsis thaliana plants. |
1.9 | | AT3G01290 | 'nlp20; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.9 | | AT3G01290 | 'abscisic acids; 50 micromolar' vs 'none' in 'wild type genotype' | compound, genotype | An Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress |
1.9 | | AT3G01290 | 'double mutant at3g03940/at518190 knockdown' vs 'wild type' | genotype | Osmotic stress induces phosphorylation of histone H3 at threonine 3 in pericentromeric regions of Arabidopsis thaliana [expression] |
1.9 | | AT3G01290 | 'mbd6 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana |
1.9 | | AT3G01290 | '9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'total mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
1.9 | | AT3G01290 | 'powdery mildew' vs 'none' in 'wild type genotype' | genotype, infect | Transcription profiling of Arabidopsis callose synthase deficient (pmr4-1) mutant and wild type plants infected with powdery mildew |
-1.9 | | AT3G01290 | 'sucrose; 1 percent' vs 'none' in 'RBRcs mutant' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose |
1.9 | | AT3G01290 | 'hst-15 mutant' vs 'wild type' in 'Col-0' | ecotype, genotype | Transcription profiling by array of Arabidopsis mutant for dcl1, dcl2, hen1, hst, hyl1, rdr1, rdr2, or rdr6 |
-1.9 | | AT3G01290 | 'WER::GFP' vs 'wild type genotype' | genotype | Diversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset |
-1.9 | | AT3G01290 | 'dehydration stress' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
1.9 | | AT3G01290 | 'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
1.9 | | AT3G01290 | 'optimum photosynthesis temperature' vs 'baseline growth temperature' | growth condition | Transcription profiling by array of Arabidopsis after growth at different temperatures |
1.9 | | AT3G01290 | 'flg22' vs 'water' at '3 hour' | compound, time | Transcription profiling by array of Arabidopsis after treatment with oligogalacturonides |
1.9 | | AT3G01290 | 'Pseudomonas syringae pv. Maculicola with effector AvrRpt2' at '6 hour' vs 'none' | time, treatment | Expression profiling of Col-0 treated with Psm:AvrRpt2 |
1.9 | | AT3G01290 | 'msh1 albino mutant' vs 'wild type' | genotype | Transcript profiling of Arabidopsis albino msh1 mutants |
-1.9 | | AT3G01290 | 'rhd6 WER::GFP' vs 'wild type genotype' | genotype | Diversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset |
-1.9 | | AT3G01290 | 'after cold treatment at 4 degrees Celsius' vs 'before cold treatment' | growth condition | Transcription profiling of Arabdiposis plants before and after cold treatment using spike-in controls to allow measurement of absolute mRNA expression at the global level |
1.9 | | AT3G01290 | 'sid2-2; Alternaria brassicicola' at '24 hours post infection' vs 'wild type; mock' at '24 hours post infection' | genotype, infect, sampling time point | Responses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection |
1.8 | | AT3G01290 | 'Sei-0 x Col-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
1.8 | | AT3G01290 | 'mechanical stimulation' at '40 minute' vs 'none' | stimulus, time | RNAseq on touch-treated Arabidopsis thaliana plants |
1.8 | | AT3G01290 | 'elf18; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
-1.8 | | AT3G01290 | 'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.8 | | AT3G01290 | 'pH 4.5' vs 'pH 6' at 8 hour | growth condition, time | Transcription profiling by array of Arabidopsis grown at low pH |
1.8 | | AT3G01290 | 'phosphate-lacking medium' vs 'complete medium' in 'wild type' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
1.8 | | AT3G01290 | 'ahk2/ahk3/ahk4 triple mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis ahk mutants |
1.8 | | AT3G01290 | 'camta1/3 mutant; grown at 22 C' vs 'wild type; grown at 22 C' | genotype, growth condition | Expression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants |
1.8 | | AT3G01290 | 'locally damaged by leafminer' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis leaves with localised or systemic damage by leafminer Liriomyza huidobrensis |
1.8 | | AT3G01290 | 'dexamethasone-induced STM overexpression' vs 'dexamethasone-induced STM knock down by RNAi' at '216 hour' | phenotype, sampling time point | Transcription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls |
1.8 | | AT3G01290 | 'triazolopyrimidine' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after treatment with triazolopyrimidine |
-1.8 | | AT3G01290 | '4 hour (light)' vs '0 hour (light)' | growth condition, time | Transcription profiling of diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves |
-1.8 | | AT3G01290 | 'protoplasting' vs 'control' | treatment | Transcription profiling by array of Arabidopsis protoplasted root cells after iron deprivation |
1.8 | | AT3G01290 | '96h' vs '48h' | organism part, time | Transcription profiling by array of Arabidopsis grown in elevated carbon dioxide levels in ambient light |
-1.8 | | AT3G01290 | '2hr transitory KNO3' vs 'control' in 'epidermis and cortex' | compound, organism part | Transcription profiling by array of Arabidopsis root cells after treatment with KNO3 |
-1.8 | | AT3G01290 | '2hr continuous KNO3, MSX and Gln' vs '2hr continuous KCl and MSX' in 'pericycle' | compound, organism part | Transcription profiling by array of Arabidopsis root cells after treatment with KNO3 |
1.8 | | AT3G01290 | 'CPEB_Arabidopsis_complex I mutant' vs 'wild type' | genotype | Transcription profiling of Arabidopsis wild type and complex I mutant plants |
1.7 | | AT3G01290 | 'exposed to 10 degree Celsius; wild type; 1 hour' vs 'control; wild type' | environmental stress, genotype, time | Genome-wide analysis of wild type and gemin2 mutant plants [cold exposure] |
1.7 | | AT3G01290 | 'mechanical stimulation' at '60 minute' vs 'none' | stimulus, time | RNAseq on touch-treated Arabidopsis thaliana plants |
1.7 | | AT3G01290 | 'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
1.7 | | AT3G01290 | 'Pseudomonas syringae DC3000 COR-avrPphB strain' vs 'mock' in 'wild type' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains |
-1.7 | | AT3G01290 | 'pepr1-1 Pepr2-3; Pep2' at '2 hour' vs 'wild type; Pep2' at '2 hour' | genotype, time, treatment | Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2. |
1.7 | | AT3G01290 | 'low pH (pH 4.6)' vs 'standard pH (pH 5.7)' in 'root columella root cap' | growth condition, organism part | Transcription profiling by array of Arabidopsis root cells after growth in low pH conditions |
1.7 | | AT3G01290 | 'ire1a/ire1b' vs 'wild type' in 'tunicamycin 5 milligram per liter' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ire1 after treatment with tunicamycin |
1.7 | | AT3G01290 | '57 day' vs '29 day' | age | RNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence |
1.7 | | AT3G01290 | 'hypoxia' vs 'control' in 'wild type' | genotype, growth condition | Expression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions |
1.7 | | AT3G01290 | 'AT4G01050 knock out' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis TROL knock-out plants |
1.7 | | AT3G01290 | '100 micromolar; 4-chloro-6-methyl-2-phenylpyrimidine' vs 'control' at '4 hour' | compound, time | Transcription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine |
-1.7 | | AT3G01290 | '3% glucose' at '2 hour' vs 'control' at '0 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid |
1.7 | | AT3G01290 | 'srk2dei triple mutant' vs 'wild type' in 'dehydration stress' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
-1.7 | | AT3G01290 | 'oxt6 mutant' vs 'wild type' | genotype | A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana |
-1.7 | | AT3G01290 | 'drought' vs 'control' in 'camta1-3 mutant; leaf' | genotype, growth condition, organism part | Role of CAMTA1 gene under drought stress |
1.7 | | AT3G01290 | 'WOX1-2' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
-1.7 | | AT3G01290 | '2 hour; excess light' vs '0 hour; low light' in 'tnr4 mutant' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
1.7 | | AT3G01290 | 'dde2-2; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection' | genotype, infect, sampling time point | Responses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection |
1.7 | | AT3G01290 | 'CAP-D3 mutant line SAIL_826_B06' vs 'wild type genotype' | genotype | Influence of CAP-D3 in Arabidopsis thaliana transcription |
1.7 | | AT3G01290 | 'wild type; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection' | genotype, infect, sampling time point | Responses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection |
-1.7 | | AT3G01290 | 'drought' vs 'control' in 'wild type; leaf' | genotype, growth condition, organism part | Role of CAMTA1 gene under drought stress |
1.7 | | AT3G01290 | 'warm/hot temperature regimen' vs 'none' in 'wild type genotype' | environmental stress, genotype | Genome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq] |
1.6 | | AT3G01290 | 'hda6 mutant' vs 'wild type' | genotype | Transcription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants |
1.6 | | AT3G01290 | 'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.6 | | AT3G01290 | 'flg22' vs 'none' | stimulus | RNA-seq of Arabidopsis thaliana seedlings treated with Flg22 or Pep1 |
1.6 | | AT3G01290 | '42 day' vs '29 day' | age | RNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence |
-1.6 | | AT3G01290 | 'tcx2; FEZ:FEZ-GFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
-1.6 | | AT3G01290 | 'from low light to high light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)' | environmental stress, genotype | Transcription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light |
-1.6 | | AT3G01290 | '35S::WRKY23-SRDX' vs 'wild type genotype' in 'auxin; 10 micromolar' | compound, genotype | Microarray designed to find PIN polarity regulators downstream of TIR1/AFB |
1.6 | | AT3G01290 | 'antimycin A; 50 micromolar' vs 'water' in 'wild type' | compound, genotype | Transcription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A |
1.6 | | AT3G01290 | '96h' vs '48h' | organism part, time | Transcription profiling by array of Arabidopsis grown in ambient carbon dioxide and ambient light |
-1.6 | | AT3G01290 | 'high light; wild type' vs 'control; wild type' | environmental stress, genotype | Transcription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light |
1.6 | | AT3G01290 | 'sid2-2; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection' | genotype, infect, sampling time point | Responses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection |
1.6 | | AT3G01290 | 'flg22; 100 nanomolar' vs 'none' in 'wild type genotype; 8 minute' | compound, genotype, time | EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II |
1.6 | | AT3G01290 | 'dde2-2; Alternaria brassicicola' at '24 hours post infection' vs 'wild type; mock' at '24 hours post infection' | genotype, infect, sampling time point | Responses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection |
1.6 | | AT3G01290 | 'low pH (pH 4.6)' vs 'standard pH (pH 5.7)' in 'root cortex' | growth condition, organism part | Transcription profiling by array of Arabidopsis root cells after growth in low pH conditions |
1.6 | | AT3G01290 | 'phosphate deprivation' vs 'control' in 'wild type genotype; shoot' | genotype, growth condition, organism part | Transcription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation |
-1.6 | | AT3G01290 | 'eds16 mutant; no infection' vs 'wild type; no infection' at 0 hour | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii |
-1.6 | | AT3G01290 | 'light pulse in the middle of the night' vs 'night time control' | growth condition | RNA-seq of Arabidopsis seedlings with or without light pulses treatment in the middle of day or night against untreated controls to study how the light pulses control the phase of the circadian clock |
1.6 | | AT3G01290 | '4 days salt treatment' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis leaves under the condition of salt-induced senescence |
1.6 | | AT3G01290 | 'sni-1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for sni1 |
-1.5 | | AT3G01290 | 'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.5 | | AT3G01290 | 'vtc1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for vtc1 or abi4 |
1.5 | | AT3G01290 | 'OGs; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.5 | | AT3G01290 | 'Sphingomonas melonis Fr1 colonization; Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day' | growth condition, infect, sampling time point | Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000 |
1.5 | | AT3G01290 | 'anac090 loss of function mutant' vs 'wild type genotype' | genotype | Regulatory inversion in NAC networks steers the timing of age-dependent cell death in plants [RNA-Seq] |
1.5 | | AT3G01290 | 'salicylic acid' vs 'control' in 'npr1 sni1 brca2a mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for npr1, sni1, ssn2 and/or brca2a after treatment with salicylic acid |
1.5 | | AT3G01290 | 'sulfometuron methyl' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after treatment with sulfometuron methyl herbicide |
1.5 | | AT3G01290 | 'powdery mildew' vs 'none' in 'pmr4-1' | genotype, infect | Transcription profiling of Arabidopsis callose synthase deficient (pmr4-1) mutant and wild type plants infected with powdery mildew |
1.5 | | AT3G01290 | 'dexamethasone-induced STM overexpression' vs 'wild type' at '216 hour' | phenotype, sampling time point | Transcription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls |
-1.5 | | AT3G01290 | 'cs26 mutant' vs 'wild type' in 'short day photoperiod' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods |
-1.5 | | AT3G01290 | 'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'wild type' at '3 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout |
1.5 | | AT3G01290 | 'pmr5 pmr6 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for pmr5 and/or pmr6 |
1.5 | | AT3G01290 | 'Phytophthora infestans' vs 'none' in 'erp2 mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
1.5 | | AT3G01290 | 'Erysiphe orontii' vs 'none' at '72 hour' | infect, time | Transcription profiling by array of Arabidopsis after inoculation with Erysiphe orontii |
1.5 | | AT3G01290 | 'ambient carbon dioxide 48h' vs 'ambient carbon dioxide 24h' | growth condition, organism part, time | Transcription profiling by array of Arabidopsis grown in ambient or elevated carbon dioxide at low light levels |
-1.5 | | AT3G01290 | 'eds16 mutant; Golovinomyces orontii infection' vs 'wild type; Golovinomyces orontii infection' at 5 day | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii |
-1.5 | | AT3G01290 | 'L-azetidine-2-carboxylic acid' vs 'L-proline' | compound, temperature | Transcription profiling by array of Arabidopsis after heat shock or treatment with tunicamycin or L-azetidine-2-carboxylic acid |
1.5 | | AT3G01290 | 'ein2-1; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection' | genotype, infect, sampling time point | Responses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection |
-1.5 | | AT3G01290 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; leaf' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
1.5 | | AT3G01290 | 'Phytophthora infestans' vs 'none' in 'wild type' at '12 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-1.5 | | AT3G01290 | 'beta-estradiol 5 micromolar' vs 'water' at 12h | compound, time | Transcription profiling by array of Arabidopsis with RNAi-mediated knockdown of RBR after treatment with beta estradiol |
1.4 | | AT3G01290 | 'trichostatin; 1 micromolar' vs 'none' in 'pUBI10::mCherry-GR-linker-WUS' | compound, genotype | WUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq] |
1.4 | | AT3G01290 | 'bli-1 -/-' vs 'wild type genotype' | genotype | BLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana |
-1.4 | | AT3G01290 | 'cdk8-1' vs 'wild type genotype' | genotype | Gene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1 |
-1.4 | | AT3G01290 | '7 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
-1.4 | | AT3G01290 | 'abscisic acid; 50 micromolar' vs 'mock' in 'wild type' | compound, genotype | Transcription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA |
-1.4 | | AT3G01290 | 'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '90 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.4 | | AT3G01290 | 'arr22-ox' vs 'wild type' in 't-zeatin' | genotype, growth condition | Transcription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin |
-1.4 | | AT3G01290 | 'drought' vs 'control' in 'wild type; root' | genotype, growth condition, organism part | Role of CAMTA1 gene under drought stress |
1.4 | | AT3G01290 | 'mea homozygous knockout' vs 'wild type genotype' in '4 days after pollination; seed' | developmental stage, genotype, organism part | Transcriptome profile of Arabidopsis thaliana wild-type versus mea mutant ovary and seed at different developmental time points |
1.4 | | AT3G01290 | 'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.4 | | AT3G01290 | 'chitooctaose; 1 micromolar' vs 'none' in 'erf5/6 double mutant' | compound, genotype | Comparison of gene expression profiles between erf5/6 and WT Arabidopsis in response to chitooctaose |
1.4 | | AT3G01290 | 'antimycin A; 50 micromolar' vs 'water' in 'rao1-2 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A |
1.4 | | AT3G01290 | 'Bla-1 x Hh-0' vs 'Hh-0' | ecotype | Transcription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents |
1.4 | | AT3G01290 | 'phosphate-lacking medium' vs 'complete medium' in 'spx1,spx2 double mutant' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
1.4 | | AT3G01290 | 'antimycin A; 50 micromolar' vs 'water' in 'rao1-1 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A |
1.4 | | AT3G01290 | '35S::HA::RAP2.12' vs 'wild type' in 'hypoxia' | genotype, growth condition | Transcription profiling by array of Arabidopsis overexpressing RAP2.12 or with RAP2.12 and RAP2.2 silenced after growth in hypoxic conditions |
-1.4 | | AT3G01290 | 'estradiol; 2 micromolar' vs 'DMSO' at '12 hour' | compound, time | Transcription profiling by array of Arabidopsis expressing DUO1 as a result of induction with estradiol |
-1.4 | | AT3G01290 | 'sucrose; 1 percent' vs 'none' in 'wild type' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose |
1.4 | | AT3G01290 | 'Phytophthera infestans' vs 'none' at '12 hour' | infect, time | Transcription profiling by array of Arabidopsis after infection with Phytophthera infestans |
-1.4 | | AT3G01290 | 'essp3 and brm mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis seedlings mutant for essp3 and brm |
1.4 | | AT3G01290 | 'MYB96 overexpression' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing MYB96 or myb96 knock out mutants |
1.4 | | AT3G01290 | 'mbd11 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana |
-1.4 | | AT3G01290 | 'L17 phyA' line' vs 'wild type' | genotype | Expression data from 10-days old dark grown Arabidopsis seedlings of wild type (Col-0), sps1 line and L17 line. |
-1.4 | | AT3G01290 | 'dexamethasone' vs 'no compound' in 'GVGdvl4' | compound, genotype | Transcription profiling by array of Arabidopsis overexpressing dvl4 after treatment with dexamethasone |
1.4 | | AT3G01290 | 'camta1/2 mutant; grown at 22 C' vs 'wild type; grown at 22 C' | genotype, growth condition | Expression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants |
1.4 | | AT3G01290 | 'salicylic acid' vs 'Silwet' at time: '4 hours' in ecotype: 'Col-0' | growth condition, time, ecotype | Transcription profiling by array of seven ecotypes of Arabidopsis thaliana after time course treatment with salicylic acid. |
-1.4 | | AT3G01290 | 'sodium nitroprusside' vs 'none' | compound | Expression data from Arabidopsis thaliana treated with NO donor SNP, compared to NO depletion by cPTIO |
-1.4 | | AT3G01290 | 'oas-a1.1' vs 'wild type' in 'untreated shoot' at '0 hour' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis mutant for oas-a1 after treatment with cadmium chloride |
1.4 | | AT3G01290 | 'pdx1.3 knockout' vs 'wild type' in 'leaf' | genotype, organism part | Expression data from WT Col-0 and the pdx1.3 ko mutant of Arabidopsis |
-1.4 | | AT3G01290 | 'Plasmodiophora brassicae' vs 'none' at '10 day' | infect, time | Plasmodiophora brassicae infection of Arabidopsis thaliana |
-1.4 | | AT3G01290 | 'GVGdvl4' vs 'control' in 'dexamethasone' | compound, genotype | Transcription profiling by array of Arabidopsis overexpressing dvl4 after treatment with dexamethasone |
-1.4 | | AT3G01290 | 'COBL9::GFP' vs 'wild type genotype' | genotype | Diversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset |
-1.4 | | AT3G01290 | 'low water potential stress' vs 'control' in 'hai1-2 mutant' | genotype, growth condition | Comparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant |
1.3 | | AT3G01290 | 'bli-1 -/-; ire1b -/-' vs 'wild type genotype' | genotype | BLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana |
1.3 | | AT3G01290 | 'exposed to 10 degree Celsius; wild type; 24 hour' vs 'control; wild type' | environmental stress, genotype, time | Genome-wide analysis of wild type and gemin2 mutant plants [cold exposure] |
-1.3 | | AT3G01290 | 'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '180 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.3 | | AT3G01290 | 'AtPep1' vs 'none' | stimulus | RNA-seq of Arabidopsis thaliana seedlings treated with Flg22 or Pep1 |
1.3 | | AT3G01290 | 'short Poly(A)-tail; paps1-1' vs 'short Poly(A)-tail; wild type' | RNA, genotype | Genome-wide analysis of PAPS1-dependent polyadenylation identifies novel roles for functionally specialized poly(A) polymerases in Arabidopsis thaliana |
-1.3 | | AT3G01290 | 'excess light; none; 2 hour' vs 'low light; none; 0 hour' | compound, growth condition, time | Transcription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB |
1.3 | | AT3G01290 | 'letm1-2 homozygous, letm2-1 heterozygous double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis wild-type seedlings and either single or double knock-out mutants of LETM1 or LETM2 |
1.3 | | AT3G01290 | 'low phosphate' vs 'control' in 'none; wild type' | compound, genotype, growth condition | Transcription profiling by array of Arabidopsis MKK9DD (constitutively active MKK9 kinase mutant) overexpressing seedlings and Pi-starved wild type seedlings to identify the same regulated genes |
1.3 | | AT3G01290 | 'chitooctaose; 1 micromolar' vs 'none' in 'wild type' | compound, genotype | Comparison of gene expression profiles between erf5/6 and WT Arabidopsis in response to chitooctaose |
-1.3 | | AT3G01290 | 'dexamethasone; 10 micromolar' vs 'dimethyl sulfoxide; 0.01 percent' in 'mCherry-RAX1-GR' | compound, genotype | RNA-seq of Arabidopsis 14 day-old seedlings expressing either mCherry-RAX1-GR or mCherry-GR with 4h mock vs. dexamethasone treatment |
-1.3 | | AT3G01290 | 'RBRcs mutant' vs 'wild type' in 'sucrose; 1 percent' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose |
1.3 | | AT3G01290 | 'trans-zeatin; 20 micromolar' vs 'control' in 'arr10 arr12 double mutant' | compound, genotype | Transcription profiling of aerial parts of Arabidopsis wild type and arr10 arr12 double mutant seedlings treated with the cytokinin trans-zeatin |
1.3 | | AT3G01290 | 't-zeatin; SALK_098604, SALK_054752' vs 'DMSO; SALK_098604, SALK_054752' | compound, ecotype | Transcription profiling by array of Arabidopsis mutant for arr10 and arr12 after treatment with t-zeatin |
-1.3 | | AT3G01290 | 'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '180 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.3 | | AT3G01290 | 'met1 mutant' vs 'wild type' at '4 hour' | genotype, time | Transcription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours |
1.3 | | AT3G01290 | 'crab shell chitin' vs 'water' | compound | Transcription profiling by array of Arabidopsis after treatment with crab shell chitin or chitin octamer |
-1.3 | | AT3G01290 | 'ddm1-12 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis polyploidy-associated transcriptional gene silencing (paTGS) mutants ddm1-12 and hog1-7 against wild type controls |
1.3 | | AT3G01290 | 'edr1 mutant' vs 'wild type' in 'Golovinomyces cichoracearum' at '18 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for edr1 after infection with Golovinomyces cichoracearum |
1.3 | | AT3G01290 | 'scarecrow mutant' vs 'wild type' | genotype | Transcription profiling of Scarecrow mutant Arabidopsis root-tips of 5-day-old plants to those of wildtype reveals an evolutionarily conserved mechanism delimiting SHR movement defines a single layer of endodermis in plants |
1.3 | | AT3G01290 | '100 micromolar; 4-chloro-6-methyl-2-phenylpyrimidine' vs 'control' at '24 hour' | compound, time | Transcription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine |
-1.3 | | AT3G01290 | '2 hour; excess light' vs '0 hour; low light' in 'hsfa1dhsfa2hsfa3 mutant' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
1.3 | | AT3G01290 | 'arf6-2, arf8-3 double mutant' vs 'wild type' at 'flowering stage' | developmental stage, genotype | Transcription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant |
-1.3 | | AT3G01290 | 'fpgs1 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidiopsis inflorescence stems from fpgs1 mutants |
-1.3 | | AT3G01290 | '8 hour (light)' vs '0 hour (light)' | growth condition, time | Transcription profiling of diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves |
1.3 | | AT3G01290 | 'edr1 mutant' vs 'wild type' in 'Golovinomyces cichoracearum' at '36 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for edr1 after infection with Golovinomyces cichoracearum |
1.3 | | AT3G01290 | '35S::MIF1; dark' vs '35S::MIF1; light' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions |
1.3 | | AT3G01290 | 'MtNPF1.7 expression' vs 'wild type genotype' in '0.1 mM nitrate' | genotype, growth condition | Transcriptional profiling of Arabidopsis constitutively expressing Medicago truncatula NRT1 PTR FAMILY 1.7 |
1.3 | | AT3G01290 | '10 micromolar; dexamethasone' vs 'none' at '8 hour' | compound, time | Identifying FIL-response genes |
-1.3 | | AT3G01290 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 gpa1-4 double mutant; leaf' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
-1.3 | | AT3G01290 | 'abscisic acid and dimethylthiourea' vs 'ethanol' | compound | Transcription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea |
-1.3 | | AT3G01290 | 'photoperiod induced flowering at 22 hours' vs 'control at 22 hours' | growth condition, sampling time point | Transcription profiling by array of Arabidopsis thaliana roots following the photoperiodic induction of flowering |
1.3 | | AT3G01290 | 'pdx1.3 knockout' vs 'wild type' in 'root' | genotype, organism part | Expression data from WT Col-0 and the pdx1.3 ko mutant of Arabidopsis |
1.3 | | AT3G01290 | '2,6-dichloroisonicotinic acid' vs 'none' in 'wild type' at '6 day' | compound, genotype, time | Transcription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid |
-1.3 | | AT3G01290 | '35S:HSFA1b-RFP' vs 'wild type genotype' in 'warm/hot temperature regimen' | environmental stress, genotype | Genome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq] |
-1.2 | | AT3G01290 | 'abscisic acids; 100 micromolar' vs 'none' in 'wild type genotype' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
-1.2 | | AT3G01290 | 'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-3' | compound, genotype | Transcription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA |
-1.2 | | AT3G01290 | 'atphb3 ANAC017' vs 'wild type' | age, genotype | Transcription profiling by high throughput sequencing of Arabidopsis mutants that are defective in mitochondrial proteins |
-1.2 | | AT3G01290 | 'med5a-1; med5b-1' vs 'wild type genotype' | genotype | Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof |
1.2 | | AT3G01290 | 'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '2 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
-1.2 | | AT3G01290 | 'med5a/5b ref8-1 triple mutant' vs 'wild type' | genotype | Transcription profiling by high throughput sequencing of Arabidospsis ref8-1, med5a/5b, and med5a/5b ref8-1 mutants |
-1.2 | | AT3G01290 | 'gapcp mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for gapcp |
1.2 | | AT3G01290 | 'letm1-1 homozygous, letm2-1 heterozygous double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis wild-type seedlings and either single or double knock-out mutants of LETM1 or LETM2 |
1.2 | | AT3G01290 | 'anac017 T-DNA mutant' vs 'wild type genotype' at '1 day' | genotype, time | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
-1.2 | | AT3G01290 | 'mCherry-RAX1-GR' vs 'mCherry-GR' in 'dexamethasone; 10 micromolar' | compound, genotype | RNA-seq of Arabidopsis 14 day-old seedlings expressing either mCherry-RAX1-GR or mCherry-GR with 4h mock vs. dexamethasone treatment |
-1.2 | | AT3G01290 | 'ccr1 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis ccr1 mutants |
1.2 | | AT3G01290 | 'mil4 mutant' vs 'wild type' in 'water' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for mil4 and/or sid2 after treatment with benzothiadiazole |
-1.2 | | AT3G01290 | 'tcx2; CYCD6:GFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
-1.2 | | AT3G01290 | 'nano-titania; 500 milligram per liter' vs 'potassium chloride; 0.1 molar' | compound | Expression data from 12-day old Arabidopsis germinants |
1.2 | | AT3G01290 | 'dicamba; 7 millimolar' vs 'none' | compound | Transcription profiling by array of Arabidopsis after treatment with dicamba |
-1.2 | | AT3G01290 | 'hog1-7 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis polyploidy-associated transcriptional gene silencing (paTGS) mutants ddm1-12 and hog1-7 against wild type controls |
-1.2 | | AT3G01290 | '2 hour; excess light' vs '0 hour; low light' in 'wild type' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
1.2 | | AT3G01290 | 'dexamethasone-induced STM overexpression' vs 'wild type' at '72 hour' | phenotype, sampling time point | Transcription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls |
-1.2 | | AT3G01290 | 'atphb3 anac017' vs 'wild type' | age, genotype | Transcription profiling by high throughput sequencing of Arabidopsis mutants that are defective in mitochondrial proteins |
-1.2 | | AT3G01290 | 'arsenic; 100 micromolar' vs 'none' in 'Col-0' | compound, ecotype | Transcriptome profiling identified genes and pathways associated with arsenic toxicity and tolerance in Arabidopsis |
-1.2 | | AT3G01290 | 'Cvi-1' vs 'Ler-2' | genotype | Transcription profiling by array of Arabidopsis lines grown on tilted hard agar surfaces |
1.2 | | AT3G01290 | 'drought stress' vs 'none' in 'ABF3 overexpression' at '24 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress |
-1.2 | | AT3G01290 | 'ga1-3, brm-1 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis ga1-3 mutants, brm-1 mutants and ga1-3, brm-1 double mutants |
-1.2 | | AT3G01290 | 'photoperiod induced flowering at 16 hours' vs 'control at 16 hours' | growth condition, sampling time point | Transcription profiling by array of Arabidopsis thaliana roots following the photoperiodic induction of flowering |
1.2 | | AT3G01290 | 'ddm1 mutant' vs 'wild type genotype' | genotype | Gene expression in Arabidopsis ddm1 mutants with high levels of Transposable Element activity |
1.2 | | AT3G01290 | '100 micromolar; fenclorim' vs 'control' at '4 hour' | compound, time | Transcription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine |
-1.2 | | AT3G01290 | 'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '3 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout |
1.2 | | AT3G01290 | 'trans-zeatin; 20 micromolar' vs 'control' in 'wild type' | compound, genotype | Transcription profiling of aerial parts of Arabidopsis wild type and arr10 arr12 double mutant seedlings treated with the cytokinin trans-zeatin |
1.2 | | AT3G01290 | 't-zeatin; Col-0' vs 'DMSO; Col-0' | compound, ecotype | Transcription profiling by array of Arabidopsis mutant for arr10 and arr12 after treatment with t-zeatin |
1.2 | | AT3G01290 | 'ahk2/ahk3 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis ahk mutants |
-1.2 | | AT3G01290 | 'steady-state RNA; 4 hour; white light' vs'steady-state RNA; dark' | RNA, time, treatment | Transcription profiling by array of Arabidopsis seedlings treated with white light |
1.2 | | AT3G01290 | 'cngc4 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for cngc1, cngc4, or akt1 |
1.2 | | AT3G01290 | 'WOX1-1' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
-1.2 | | AT3G01290 | 'stn7-1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for psae1, psad1 or stn7, or double mutant for psae1 and stn7 or psad1 and stn7 |
1.2 | | AT3G01290 | 'systemically damaged by leafminer' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis leaves with localised or systemic damage by leafminer Liriomyza huidobrensis |
1.2 | | AT3G01290 | 'pap1-D' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
1.2 | | AT3G01290 | 'variegation msh1' vs 'wild type' | RNA interference | Transcript profiling of Arabidopsis msh1 mutants |
-1.2 | | AT3G01290 | 'brm-1 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis ga1-3 mutants, brm-1 mutants and ga1-3, brm-1 double mutants |
1.2 | | AT3G01290 | '35S::ERF104; flg22' vs '35S::ERF104; none' | compound, genotype | Transcription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6 |
-1.2 | | AT3G01290 | 'drought' vs 'control' at '18:00' | growth condition, time | Transcription profiling by array of Arabidopsis after drought conditions sampled at different times of day |
1.2 | | AT3G01290 | 'mock inoculation' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina |
-1.2 | | AT3G01290 | 'wnk8-1 mutant' vs 'wild type' | genotype | Expression data from 2-week-old Arabidopsis untreated seedlings grown under a short day condition |
-1.2 | | AT3G01290 | 'Atwrky12-2' vs 'wild type' | genotype | Gene expression profiling of Arabidopsis Atwrky12 mutants stems |
1.2 | | AT3G01290 | 'Erysiphe orontii' vs 'none' at '96 hour' | infect, time | Transcription profiling by array of Arabidopsis after inoculation with Erysiphe orontii |
1.2 | | AT3G01290 | 'Phytophthora infestans' vs 'none' in 'erp2D mutant' at '12 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-1.2 | | AT3G01290 | '120 minute' vs '0 minute' in 'control; arf7, arf19 double knockout; root meristem' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
1.2 | | AT3G01290 | 'rdo3 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for rdo2, rdo3 or rdo4 |
-1.1 | | AT3G01290 | 'salt stress' vs 'none' | environmental stress | Transcription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress |
1.1 | | AT3G01290 | 'bli-1 -/-; ire1a -/-' vs 'wild type genotype' | genotype | BLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana |
1.1 | | AT3G01290 | 'limited phosphate treatment' vs 'none' | environmental stress | Transcription profiling by high throughput sequencing of Arabidopsis roots upon exposure of phosphate starvation |
1.1 | | AT3G01290 | 'Pseudomonas syringae DC3000 COR-avrPphB strain' vs 'mock' in 'upf1-5 mutant' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains |
1.1 | | AT3G01290 | 'anac017 loss of function mutant' vs 'wild type genotype' | genotype | Regulatory inversion in NAC networks steers the timing of age-dependent cell death in plants [RNA-Seq] |
-1.1 | | AT3G01290 | '5 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
1.1 | | AT3G01290 | 'abi4-102' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for vtc1 or abi4 |
1.1 | | AT3G01290 | 'exposed to 10 degree Celsius; gemin2 mutant; 1 hour' vs 'control; gemin2 mutant' | environmental stress, genotype, time | Genome-wide analysis of wild type and gemin2 mutant plants [cold exposure] |
1.1 | | AT3G01290 | 'DEWAX2 overexpression' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis thaliana columbia and DEWAX2 overexpression plants line stems |
1.1 | | AT3G01290 | 'glu1-2 mutant' vs 'wild type' in 'rosette leaf' | genotype, organism part | Transcription profiling by array of Arabidopsis mutant for Fd-GOGAT1/GLU1 |
-1.1 | | AT3G01290 | 'rlt1-1 rlt2-1 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis rlt1-1 rlt2-1 mutants |
1.1 | | AT3G01290 | 'mil4 sid2 double mutant' vs 'wild type' in 'water' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for mil4 and/or sid2 after treatment with benzothiadiazole |
1.1 | | AT3G01290 | 'elf18; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
1.1 | | AT3G01290 | 'chr11-1 chr17-1 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis chr11-1 chr17-1 mutants |
-1.1 | | AT3G01290 | 'fbl17-1 (GK_170-E02)' vs 'wild type genotype' | genotype | RNAseq analysis of Arabidopsis Col-0 wild-type and fbl17 mutant seedlings |
-1.1 | | AT3G01290 | 'pp7l-1 loss of function mutant' vs 'wild type genotype' | genotype | SERINE/THREONINE-PROTEIN PHOSPHATASE7-LIKE PP7L Regulates Chloroplast Development |
1.1 | | AT3G01290 | 'sid2 mutant' vs 'wild type' in 'water' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for mil4 and/or sid2 after treatment with benzothiadiazole |
1.1 | | AT3G01290 | 'Pseudomonas syringae pv. tomato expressing HopZ1a' vs 'MgCl2' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a |
1.1 | | AT3G01290 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Bay-0' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
1.1 | | AT3G01290 | '240 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; root meristem' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
-1.1 | | AT3G01290 | 'OsSAP11 transgenic' vs 'wild type' | genotype | Rice A20/AN1 zinc-finger containing stress-associated proteins (SAP1/11) and a receptor-like cytoplasmic kinase (OsRLCK253) interact via A20 zinc-finger and confer abiotic stress tolerance in transgenic Arabidopsis plants |
1.1 | | AT3G01290 | 'isoxaben treated' vs 'methanol treated (control)' | compound | Transcriptional profiling after inhibition of cellulose synthesis by thaxtomin and isoxaben in Arabidopsis thaliana suspension cells |
-1.1 | | AT3G01290 | 'wnk8-2 mutant' vs 'wild type' | genotype | Expression data from 2-week-old Arabidopsis untreated seedlings grown under a short day condition |
1.1 | | AT3G01290 | 'Pseudomonas syringae DC3000' vs 'control' in '12 hour' | age, growth condition | Transcription profiling by array of Arabidopsis after inoculation with Pseudomonas syringae |
1.1 | | AT3G01290 | 'ahk3/ahk4 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis ahk mutants |
1.1 | | AT3G01290 | 'scrm-D;mute' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings |
-1.1 | | AT3G01290 | 'high light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)' | environmental stress, genotype | Transcription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light |
-1.1 | | AT3G01290 | 'beta-estradiol 5 micromolar' vs 'water' at 24h | compound, time | Transcription profiling by array of Arabidopsis with RNAi-mediated knockdown of RBR after treatment with beta estradiol |
1.1 | | AT3G01290 | 'atx1-1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for atx1 |
1.1 | | AT3G01290 | 'abi4-102' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for abi4 and/or vtc2 |
1.1 | | AT3G01290 | 'drought stress' vs 'none' in 'control' at '24 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress |
-1.1 | | AT3G01290 | 'bri1-116 null mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only |
-1.1 | | AT3G01290 | '0.1 mM nitrate' vs '10 mM nitrate' in 'wild type genotype' | genotype, growth condition | Transcriptional profiling of Arabidopsis constitutively expressing Medicago truncatula NRT1 PTR FAMILY 1.7 |
-1.1 | | AT3G01290 | 'rhd2 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for rhd2/ArtbohC |
-1.1 | | AT3G01290 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 mutant; leaf' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
1.1 | | AT3G01290 | 'methyl jasmonate 0.1 micromolar' vs 'none' in 'jin1-9' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for myc2 after treatment with methyl jasmonate |
1.1 | | AT3G01290 | 'nudt7-1 sid2-1' vs 'wild type' | genotype | Transcription profiling of EDS1- and SA-dependent genes in Arabidopsis nudt7-1 |
1 | | AT3G01290 | 'Phytophthora parasitica' vs 'none' in 'wild type genotype' | genotype, infect | RNA-sequence of Arabidopsis thaliana lines gsnor1 and Col-0 post infection of Phytophthora parasitica against controls |
1 | | AT3G01290 | 'wounding' at '3 hour' vs 'none' at '0 hour' | injury, time | Transcriptional response to wounding of Arabidopsis thaliana roots |
-1 | | AT3G01290 | 'sd1-29' vs 'wild type genotype' in '3-OH-FA; 1 millimolar' at '180 minute' | compound, genotype, time | RNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course |
-1 | | AT3G01290 | 'light pulse at ZT18' vs 'control' | environmental stress | Transcription profiling by high throughput sequencing of Arabidopsis exposed to a pulse of white light at ZT18 to study the effect of light on alternative splicing |
1 | | AT3G01290 | 'prmt4a;4b double mutant' vs 'wild type' | genotype | Genome-wide analysis of the prmt5 and prmt4a;4b mutant transcriptomes |
1 | | AT3G01290 | 'At3g24500 overexpression' vs 'wild type' | genotype | Over-expression of MBF1c enhances stress tolerance |
-1 | | AT3G01290 | 'auxin' vs 'none' in '7 day' | age, growth condition | Transcription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin |
1 | | AT3G01290 | '35 day' vs '29 day' | age | RNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence |
1 | | AT3G01290 | 'oligomycin' vs 'control' at '1 hour' | growth condition, time | Effect of oligomycin on transcript levels in Arabidopsis seedling cultures |
1 | | AT3G01290 | '30 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; root meristem' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
-1 | | AT3G01290 | 'rsa1-1 mutant' vs 'wild type' in 'sodium chloride; 120 millimolar' at '24 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis rsa1-1 mutants under salt stress |
-1 | | AT3G01290 | 'arsenic; 200 micromolar' vs 'none' in 'Col-0' | compound, ecotype | Transcriptome profiling identified genes and pathways associated with arsenic toxicity and tolerance in Arabidopsis |
1 | | AT3G01290 | 'coi1-2 mutant' vs 'wild type genotype' in 'Sclerotinia sclerotiorum' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
1 | | AT3G01290 | 'chitin octamer' vs 'water' | compound | Transcription profiling by array of Arabidopsis after treatment with crab shell chitin or chitin octamer |
1 | | AT3G01290 | 'SCO3-1 point mutation' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for sco3 |
1 | | AT3G01290 | 'hyl1 loss of function mutant' vs 'wild type genotype' | genotype | Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq] |
1 | | AT3G01290 | 'catalase2 mutant' vs 'wild type; transferred to air for 2 days in short day length regime' | genotype, growth condition | Transcription profiling by array of Arabidopsis catalase 2 mutant in response to CO2 level and photoperiod |
-1 | | AT3G01290 | '35S:BatIMS knock-in' vs 'empty vector' | genotype | Transcription profiling by array of Arabidopsis seedlings overexpressing an IPMS gene from Brassica (BatIMS) |
-1 | | AT3G01290 | 'LBD38 overexpression' vs 'wild type' in 'nitrogen depletion' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for or overexpressing LBD37 and LBD38 after nitrogen deprivation |
1 | | AT3G01290 | '2 hr hypoxia' vs '2 hr control' in 'total mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
1 | | AT3G01290 | '120 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
-1 | | AT3G01290 | 'sps1' vs 'wild type' | genotype | Expression data from 10-days old dark grown Arabidopsis seedlings of wild type (Col-0), sps1 line and L17 line. |
1 | | AT3G01290 | 'bzr1-1D;bri1-116 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only |
1 | | AT3G01290 | 'low light; wild type' vs 'control; wild type' | environmental stress, genotype | Transcription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light |
1 | | AT3G01290 | 'pnp1-1' vs 'wild type' in 'full nutrient medium' at '168 hour' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis mutant for pnp after phosphate deprivation |
1 | | AT3G01290 | 'stunted msh1' vs 'wild type' | RNA interference | Transcript profiling of Arabidopsis msh1 mutants |
-1 | | AT3G01290 | 'wnk8-3 mutant' vs 'wild type' | genotype | Expression data from 2-week-old Arabidopsis untreated seedlings grown under a short day condition |
1 | | AT3G01290 | 'Phytophthora infestans' vs 'none' in 'erp140 mutant' at '12 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-1 | | AT3G01290 | 'continuous white light' vs 'complete darkness' at '4 h' | growth condition | Transcription profiling by array of Arabidopsis after different light treatments |
1 | | AT3G01290 | 'camta1-3 mutant' vs 'wild type' in 'control; leaf' | genotype, growth condition, organism part | Role of CAMTA1 gene under drought stress |
-1 | | AT3G01290 | 'gpt2 T-DNA mutant' vs 'wild type genotype' in 'low light intensity' at '1 day' | genotype, growth condition, time | Acclimation of photosynthesis to changes in the environment results decreases oxidative stress in Arabidopsis thaliana |
-1 | | AT3G01290 | 'cct-1' vs 'wild type' | genotype | The Arabidopsis Mediator CDK8 module genes CCT and GCT are global regulators of developmental phase transitions. |