-5.5 | | AT3G03640 | 'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '24 hour' | phenotype, time | Transcription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response |
5.3 | | AT3G03640 | 'tunicamycin; 5 microgram per milliliter' vs 'none' in 'ire1b mutant' | compound, genotype | Exploring the link between ER stress and autophagy in Arabidopsis thaliana |
4.8 | | AT3G03640 | 'tunicamycin; 5 microgram per milliliter' vs 'none' in 'ire1a; ire1b double mutant' | compound, genotype | Exploring the link between ER stress and autophagy in Arabidopsis thaliana |
4.7 | | AT3G03640 | 'Turnip mosaic virus' vs 'mock' in 'zone 0' | infect, sampling site | Transcription profiling by of Arabidopsis leaves after infection with Potyvirus turnip mosaic virus |
3.9 | | AT3G03640 | 'CL37' vs 'fae1 mutant' in '11 to 12 DPA' | developmental stage, genotype | RNASeq of Developing Arabidopsis Seeds Producing Hydroxy-Fatty Acids |
3.8 | | AT3G03640 | 'bzip17 -/- ; bzip28 -/-' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter' | compound, genotype | mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers |
3.8 | | AT3G03640 | 'COBL9::GFP' vs 'wild type genotype' | genotype | Diversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset |
3.8 | | AT3G03640 | 'cs26 mutant' vs 'wild type' in 'long day photoperiod' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods |
3.6 | | AT3G03640 | 'ire1b mutant' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter' | compound, genotype | Exploring the link between ER stress and autophagy in Arabidopsis thaliana |
3.5 | | AT3G03640 | 'wild type; Pseudomonas syringae pv. maculicola str. ES4326' vs 'wild type; mock' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance |
3.5 | | AT3G03640 | 'Turnip mosaic virus' vs 'mock' in 'zone 1' | infect, sampling site | Transcription profiling by of Arabidopsis leaves after infection with Potyvirus turnip mosaic virus |
3.3 | | AT3G03640 | 'cs26 mutant' vs 'wild type' in 'short day photoperiod' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods |
3.2 | | AT3G03640 | 'ire1a; ire1b double mutant' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter' | compound, genotype | Exploring the link between ER stress and autophagy in Arabidopsis thaliana |
3.2 | | AT3G03640 | 'tunicamycin; 5 microgram per milliliter' vs 'none' in 'bzip17 -/- ; bzip28 -/-' | compound, genotype | mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers |
3.2 | | AT3G03640 | 'vte2 mutant' vs 'wild type' in '3 day' | age, genotype | Transcription profiling by array of Arabidopsis mutant for vte1 or vte2 |
3.1 | | AT3G03640 | 'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'none' | compound, genotype | WUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq] |
3.1 | | AT3G03640 | 'rhd6 WER::GFP' vs 'wild type genotype' | genotype | Diversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset |
3.1 | | AT3G03640 | 'WER::GFP' vs 'wild type genotype' | genotype | Diversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset |
3 | | AT3G03640 | 'polysomal RNA; turnip mosaic virus inoculated' vs 'polysomal RNA; mock' | RNA, infect | The effect of TuMV on translation initiation in Arabidopsis |
3 | | AT3G03640 | 'total RNA; turnip mosaic virus inoculated' vs 'total RNA; mock' | RNA, infect | The effect of TuMV on translation initiation in Arabidopsis |
2.7 | | AT3G03640 | 'Ler/Kas-2 hybrid' vs 'Kas-2' in 'wild type genotype' | ecotype, genotype | RNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL) |
2.7 | | AT3G03640 | '35 micromolar; N-lauroylethanolamine (NAE(12:0))' vs '0.05 percent; DMSO' | compound | Transcription profiling of Arabidopsis seedlings treated with NAE(12:0) |
2.6 | | AT3G03640 | 'sid2-1 mutant; Pseudomonas syringae pv. maculicola str. ES4326' vs 'sid2-1 mutant; mock' | genotype, infect | Transcription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance |
2.5 | | AT3G03640 | 'tcx2; FEZ:FEZ-GFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
2.5 | | AT3G03640 | 'ozone; 350 nanoliter' vs 'none' in 'Cvi-0' | compound, ecotype | Transcriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity. |
2.5 | | AT3G03640 | '13 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
2.4 | | AT3G03640 | '15 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
2.4 | | AT3G03640 | 'NaCl' vs 'control' in 'stele cells' | cell type, growth condition | Transcription profiling by array of Arabidopsis root cells after treatment with NaCl |
2.3 | | AT3G03640 | 'salicylic acid; 0.5 millimolar' vs 'none' in 'wild type genotype' | compound, genotype | Salicylic acid-induced gene expression in wild-type Col-0 and mutant upl3-4 Arabidopsis thaliana plants. |
2.3 | | AT3G03640 | 'drought' vs 'control' in 'camta1-3 mutant; root' | genotype, growth condition, organism part | Role of CAMTA1 gene under drought stress |
-2.3 | | AT3G03640 | 'dexamethasone and cycloheximide' vs 'control' | treatment | Transcription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts |
2.3 | | AT3G03640 | 'MgCl2' vs 'none' in 'ulp1c/ulp1d double mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a |
2.3 | | AT3G03640 | 'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
2.3 | | AT3G03640 | 'pao-1 mutant' vs 'wild type genotype' in 'continuous dark (no light) regimen' at '2 day' | environmental stress, genotype, time | Transcriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway |
-2.2 | | AT3G03640 | '7 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
2.2 | | AT3G03640 | 'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-2 mutant' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2 |
2.2 | | AT3G03640 | 'dehydration stress' vs 'control' in 'srk2dei triple mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
2.2 | | AT3G03640 | 'pH 4.5' vs 'pH 6' at 8 hour | growth condition, time | Transcription profiling by array of Arabidopsis grown at low pH |
2.2 | | AT3G03640 | 'csn4-1 mutant' vs 'wild type' in 'light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
2.1 | | AT3G03640 | 'tcx2; TMO5:3xGFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
2.1 | | AT3G03640 | 'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-1 mutant' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2 |
-2.1 | | AT3G03640 | '500 micromolar; phosphate' vs 'none' in 'control' | compound, growth condition | Transcription profiling by array of Arabidopsis roots grown with different concentrations of phosphate |
2.1 | | AT3G03640 | 'AtGATA2ox transgenic' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing AtGATA2 or mutant for bri1 |
2 | | AT3G03640 | 'epcr1-/-; epcr2-/-' vs 'wild type genotype' | genotype | The PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq] |
2 | | AT3G03640 | '12 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
2 | | AT3G03640 | 'lsm4 mutant' vs 'wild type' in 'Columbia ecotype' | ecotype, genotype | Transcription profiling by high throughput sequencing of Arabidopsis lsm4-1 mutants and sad1/lsm5 double mutants |
2 | | AT3G03640 | 'ire1a/ire1b' vs 'wild type' in 'tunicamycin 5 milligram per liter' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ire1 after treatment with tunicamycin |
-2 | | AT3G03640 | 'cycloheximide' vs 'control' | treatment | Transcription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts |
2 | | AT3G03640 | 'salicylic acid' vs 'none' in 'wild type' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for sdh1 after treatment with salicylic acid |
2 | | AT3G03640 | 'Pseudomonas syringae pv. tomato' vs 'none' in 'ulp1c/ulp1d double mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a |
1.9 | | AT3G03640 | 'arr21c overexpressing line' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing arr21c |
1.9 | | AT3G03640 | 'csn3-1 mutant' vs 'wild type' in 'light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
1.9 | | AT3G03640 | 'dicamba; 7 millimolar' vs 'none' | compound | Transcription profiling by array of Arabidopsis after treatment with dicamba |
1.9 | | AT3G03640 | 'paclobutrazol; 20 micromolar' vs 'none' in 'embryo' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
1.9 | | AT3G03640 | 'dehydration stress' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
1.9 | | AT3G03640 | 'water deprivation' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after water deprivation |
-1.8 | | AT3G03640 | '5 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
-1.8 | | AT3G03640 | 'sulki1-8 mutant' vs 'wild type genotype' in 'Ler/Kas-2 hybrid' | ecotype, genotype | RNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL) |
1.8 | | AT3G03640 | 'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'wild type' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
1.8 | | AT3G03640 | '2 hour; excess light' vs '0 hour; low light' in 'wild type' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
1.8 | | AT3G03640 | 'seed after 12 h of stratification (12 h S)' vs 'seed after 1 h of stratification (1 h S)' | growth condition | Transcription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination |
1.8 | | AT3G03640 | 'Pseudomonas syringae pv. Maculicola with effector AvrRpt2' at '6 hour' vs 'none' | time, treatment | Expression profiling of Col-0 treated with Psm:AvrRpt2 |
-1.8 | | AT3G03640 | 'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; shoot' | genotype, growth condition, organism part | Transcription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation |
1.7 | | AT3G03640 | 'arid2-/-; arid3-/-; arid4-/-' vs 'wild type genotype' | genotype | The PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq] |
1.7 | | AT3G03640 | 'chr11-1, chr17-1 double mutant' vs 'wild type' at '8 day' | genotype, time | Transcription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture. |
1.7 | | AT3G03640 | 'abscisic acids; 50 micromolar' vs 'none' in 'wild type genotype' | compound, genotype | An Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress |
1.7 | | AT3G03640 | '9 hr hypoxia' vs '9 hr control' in 'polysomal mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
1.7 | | AT3G03640 | 'low water potential stress' vs 'control' in 'hai1-2 mutant' | genotype, growth condition | Comparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant |
1.7 | | AT3G03640 | 'nhx5-2/nhx6-2 knock outs' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis AtNHX5 and AtNHX6 single and double knock out mutants |
1.7 | | AT3G03640 | 'Pseudomonas syringae ES4326' vs 'none' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326 |
-1.7 | | AT3G03640 | 'nor1-1 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326 |
1.7 | | AT3G03640 | 'NaCl' vs 'control' in 'endodermal and quiescent center cells' | cell type, growth condition | Transcription profiling by array of Arabidopsis root cells after treatment with NaCl |
1.6 | | AT3G03640 | 'tunicamycin; 5 microgram per milliliter' vs 'none' in 'wild type genotype' | compound, genotype | Exploring the link between ER stress and autophagy in Arabidopsis thaliana |
1.6 | | AT3G03640 | '10 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
-1.6 | | AT3G03640 | 'myb36-1 (pSCR::ER:GFP)' vs 'wild type (pSCR::ER:GFP)' in 'root endodermis' | genotype, organism part | Transcription profiling by high throughput sequencing of the endodermis of Arabidopsis myb36 mutants |
1.6 | | AT3G03640 | 'ANAC017 OEa' vs 'wild type genotype' at '3 day' | genotype, time | Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis |
1.6 | | AT3G03640 | 'abscisic acid; 20 micromolar' vs 'none' in 'embryo' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
1.6 | | AT3G03640 | '2 hour; excess light' vs '0 hour; low light' in 'hsfa1dhsfa2hsfa3 mutant' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
1.6 | | AT3G03640 | 's1p -/-; s2p -/-' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter' | compound, genotype | mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers |
1.6 | | AT3G03640 | 'low water potential stress' vs 'control' in 'wild type' | genotype, growth condition | Comparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant |
1.6 | | AT3G03640 | 'karrikin; 1 micromolar; ga1-3 mutant' vs 'karrikin; 1 micromolar; wild type' | compound, genotype | Karrikin responses in Arabidopsis thaliana seed |
1.6 | | AT3G03640 | 'cabbage leaf curl virus infected' vs 'mock infected' | infect | Transcription profiling by array of Arabidopsis infected with geminivirus Cabbage leaf curl virus |
1.6 | | AT3G03640 | 'sps1' vs 'wild type' | genotype | Expression data from 10-days old dark grown Arabidopsis seedlings of wild type (Col-0), sps1 line and L17 line. |
1.6 | | AT3G03640 | 'phosphate deprivation' vs 'control' in 'wild type genotype; shoot' | genotype, growth condition, organism part | Transcription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation |
1.6 | | AT3G03640 | 'Turnip mosaic virus' vs 'mock' in 'zone 2' | infect, sampling site | Transcription profiling by of Arabidopsis leaves after infection with Potyvirus turnip mosaic virus |
1.5 | | AT3G03640 | 'abscisic acids; 50 micromolar' vs 'none' in 'nup85 loss of function mutant' | compound, genotype | An Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress |
1.5 | | AT3G03640 | 'excess light; none; 2 hour' vs 'low light; none; 0 hour' | compound, growth condition, time | Transcription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB |
1.5 | | AT3G03640 | '24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei A6; virulent' | infect, phenotype, time | Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant. |
-1.5 | | AT3G03640 | 'antimycin A; 50 micromolar' vs 'water' in 'rao1-1 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A |
1.5 | | AT3G03640 | 'ga1-3 mutant' vs 'wild type' in 'seed' | genotype, organism part | Transcription profiling of Arabidopsis seed and flowers of ga1-3 mutant |
1.5 | | AT3G03640 | 'ceh1 mutant' vs 'wild type' | genotype | Transcriptome of Arabidopsis thaliana ceh1 mutant |
1.5 | | AT3G03640 | 'water; ga1-3 mutant' vs 'water; wild type' | compound, genotype | Karrikin responses in Arabidopsis thaliana seed |
1.5 | | AT3G03640 | 'nhx5-1/nhx6-1 knock outs' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis AtNHX5 and AtNHX6 single and double knock out mutants |
1.5 | | AT3G03640 | 'tcx2; CYCD6:GFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
1.4 | | AT3G03640 | 'pdx3-4 mutant' vs 'wild type' | genotype | Transcription profiling by high throughput sequencing of Arabidopsis pdx3 mutant plants |
-1.4 | | AT3G03640 | '10 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
1.4 | | AT3G03640 | 'exposed to 10 degree Celsius; gemin2 mutant; 24 hour' vs 'control; gemin2 mutant' | environmental stress, genotype, time | Genome-wide analysis of wild type and gemin2 mutant plants [cold exposure] |
-1.4 | | AT3G03640 | 'low pH (pH 4.6)' vs 'standard pH (pH 5.7)' in 'root columella root cap' | growth condition, organism part | Transcription profiling by array of Arabidopsis root cells after growth in low pH conditions |
-1.4 | | AT3G03640 | 'ASL9 overexpressor' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing ASL9 |
1.4 | | AT3G03640 | 'tcx2; WOX5:GFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
1.4 | | AT3G03640 | '100 micromolar; 4-chloro-6-methyl-2-phenylpyrimidine' vs 'control' at '24 hour' | compound, time | Transcription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine |
1.4 | | AT3G03640 | 'apl mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis phloem from Altered Phloem Development (APL) mutants and wild type controls |
1.4 | | AT3G03640 | 'arf7 arf19 double mutant' vs 'wild type' in 'Root Mature Zone' | genotype, organism part | Transcription profiling by array of different organism parts of Arabidopsis mutant for arf7 and arf19 |
1.4 | | AT3G03640 | 'phyABCDE quintuple mutant' vs 'wild type' in 'continuous dark (no light) regimen' | genotype, light | Transcription profiling by array of Arabidopsis mutants lacking all phytochromes in response to red light exposure |
-1.4 | | AT3G03640 | 'ga1-3 gai-t6 rga-t2 rgl1-1 rgl2-1' vs 'wild type' in 'Alternaria brassicicola' at '72 hour' | genotype, time, treatment | Transcription profiling by array of Arabidopsis DELLA mutants after treatment with flg22, methyl jasmonate, Alternaria brassicicola or Pseudomonas syringae pv. tomato DC3000 |
-1.4 | | AT3G03640 | '500 micromolar; phosphate' vs 'none' in 'split root' | compound, growth condition | Transcription profiling by array of Arabidopsis roots grown with different concentrations of phosphate |
1.3 | | AT3G03640 | 'Sei-0 x Col-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
1.3 | | AT3G03640 | 'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'trichostatin; 1 micromolar' | compound, genotype | WUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq] |
1.3 | | AT3G03640 | 'Col-0 x Sei-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
-1.3 | | AT3G03640 | 'wox5-1 mutant' vs 'wild type genotype' in 'wox5 GFP positive' | genotype, phenotype | From gene networks to network motif dynamics: how the presense of positive feed-back and -forward loops between PERIANTHIA, WUSCHEL-RELATED HOMEOBOX5 and GRF-INTERACTING FACTOR 1 modulates gene expression and function in the Arabidopsis roots. |
1.3 | | AT3G03640 | 'trichostatin; 1 micromolar' vs 'none' in 'wild type genotype' | compound, genotype | WUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq] |
1.3 | | AT3G03640 | 'tunicamycin; 5 microgram per milliliter' vs 'none' in 's1p -/-; s2p -/-' | compound, genotype | mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers |
1.3 | | AT3G03640 | 'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wild type' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2 |
1.3 | | AT3G03640 | 'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '3 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout |
1.3 | | AT3G03640 | 'abi3-6 mutant' vs 'wild type' in '16 day' | age, genotype | Gene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 2] |
1.3 | | AT3G03640 | 'arf2 mutant; none' vs 'Columbia; none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for arf2 after treatment with brassinazole |
1.3 | | AT3G03640 | '2 hour; excess light' vs '0 hour; low light' in 'tnr4 mutant' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
1.3 | | AT3G03640 | 'Golovinomyces orontii; 8 hour' vs 'none; 0 hour' in 'wild type' | genotype, infect, time | Transcription profiling by array of Arabidopsis thaliana WRKY18/40 double knock out infected with Golovinomyces orontii |
1.3 | | AT3G03640 | 'bzip17 -/- ; bzip60 -/-' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter' | compound, genotype | mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers |
1.3 | | AT3G03640 | 'sub-zero acclimation' vs 'cold acclimation' in 'Rschew' at '72 hour' | ecotype, environmental stress, time | Transcription profiling by array of three Arabidopsis accessions under acclimation to sub-zero temperature at -3 degree Celsius after cold acclimation |
1.3 | | AT3G03640 | 'pft1-1; 16 degree celsius' vs 'pft1-1; 23 degree celsius' | genotype, temperature | PFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis |
1.3 | | AT3G03640 | 'ozone 500 parts per billion' vs 'control' | growth condition | Arabidopsis thaliana response to ozone |
1.3 | | AT3G03640 | 'ozone 500 parts per billion' vs 'control' | growth condition | Functional Genomics of Ozone Stress in Arabidopsis. |
1.3 | | AT3G03640 | 'phyABDE quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen' | genotype, light | Transcription profiling by array of Arabidopsis mutants lacking all phytochromes in response to red light exposure |
1.3 | | AT3G03640 | '37 degrees celsius' vs '20 degrees celsius' | compound, temperature | Transcription profiling by array of Arabidopsis after heat shock or treatment with tunicamycin or L-azetidine-2-carboxylic acid |
-1.2 | | AT3G03640 | '14 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
1.2 | | AT3G03640 | 'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '6 hour' | compound, injury, time | The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots |
1.2 | | AT3G03640 | 'exposed to 10 degree Celsius; wild type; 24 hour' vs 'control; wild type' | environmental stress, genotype, time | Genome-wide analysis of wild type and gemin2 mutant plants [cold exposure] |
1.2 | | AT3G03640 | 'rlk1 mutant' vs 'wild type' in 'water' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for rlk1 after treatment with chitooctaose |
1.2 | | AT3G03640 | ''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 6 hour' vs 'none; 0 hour' in 'wild type genotype' | genotype, infect, time | Expression profiling of Col-0 and rps2 treated with Psm:AvrRpt2 |
-1.2 | | AT3G03640 | '35 day' vs '29 day' | age | RNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence |
1.2 | | AT3G03640 | 'sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light' | environmental history, genotype, sampling time point | Transcriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b |
1.2 | | AT3G03640 | 'GID1b over expression in sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light' | environmental history, genotype, sampling time point | Transcriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b |
1.2 | | AT3G03640 | '3 percent glucose and 1 micromolar indole-3-acetic acid' vs 'none' | compound | Transcription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions |
1.2 | | AT3G03640 | 'KZ-10 x Mrk-0' vs 'Mrk-0' | ecotype | Transcription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents |
1.2 | | AT3G03640 | 'CL37' vs 'fae1 mutant' in '9 to 10 DPA' | developmental stage, genotype | RNASeq of Developing Arabidopsis Seeds Producing Hydroxy-Fatty Acids |
1.2 | | AT3G03640 | 'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '6 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout |
1.2 | | AT3G03640 | 'fus3-3 mutant' vs 'wild type' in '8 day; Col-0' | age, ecotype, genotype | Gene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1] |
1.2 | | AT3G03640 | 'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf' | developmental stage, infect, organism part, stimulus | RNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive) |
1.2 | | AT3G03640 | 'NaCl' vs 'control' in 'epidermal and lateral root cap cells' | cell type, growth condition | Transcription profiling by array of Arabidopsis root cells after treatment with NaCl |
-1.2 | | AT3G03640 | 'Blumeria graminis f. sp. hordei K1; avirulent; 18 hour' vs 'none; wild type phenotype; 18 hour' | infect, phenotype, time | Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant. |
1.2 | | AT3G03640 | 'csn3-1 mutant' vs 'wild type' in 'dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
-1.2 | | AT3G03640 | 'pBeaconRFP_IAA19mll overexpressor; none' vs 'pMON999_mRFP control vector; none' | compound, genotype | Transcription profiling by array of Arabidopsis overexpressing IAA7mll or IAA19mll after treatment with indole-3-acetic acid |
1.2 | | AT3G03640 | 'KO line' vs 'wild type' in 'Col-0' | ecotype, genotype | Transcription profiling by array of Arabidopsis mutant for At2g19270 |
1.2 | | AT3G03640 | '4 degree celsius' vs '20 degree celsius' in 'Columbia-0' | ecotype, temperature | Transcription profiling by array of nine ecotypes of Arabidopsis before and after cold acclimation |
1.2 | | AT3G03640 | '4 degree celsius' vs '20 degree celsius' in 'Rschew' | ecotype, temperature | Transcription profiling by array of nine ecotypes of Arabidopsis before and after cold acclimation |
-1.2 | | AT3G03640 | 'ft-1 mutant' vs 'wild type' in 'long 16 (hour) days at 20 degrees celsius' | genotype, growth condition | Transcription profiling by array of Arabidopsis ft-1 mutants |
1.2 | | AT3G03640 | 'iron deprivation' vs. 'control' at '24 hours' in 'root' of 'Kas-1' ecotype | ecotype, organism part, growth condition, time | Transcription profiling by array of Arabidopsis Kas-1 and Tsu-1 grown in iron-deficient medium |
-1.2 | | AT3G03640 | 'Rose Bengal; 0.5 micromolar' vs 'none' | compound | Transcription profiling by array of Arabidopsis cell suspension cultures subjected to mild treatments with three different singlet oxygen elicitors (Indigo Carmine (IC), Methylene Violet (MV) and Rose Bengal (RB)) against untreated controls |
-1.2 | | AT3G03640 | '2-(4-carboxyphenyl)-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide' vs 'none' | compound | Expression data from Arabidopsis thaliana treated with NO donor SNP, compared to NO depletion by cPTIO |
1.1 | | AT3G03640 | 'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '3 hour' | compound, injury, time | The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots |
1.1 | | AT3G03640 | 'bli-1 -/-; ire1b -/-' vs 'wild type genotype' | genotype | BLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana |
1.1 | | AT3G03640 | 'bli-1 -/-' vs 'wild type genotype' | genotype | BLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana |
1.1 | | AT3G03640 | 'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'none' at '0 hour' | compound, injury, time | The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots |
1.1 | | AT3G03640 | 'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type' | compound, genotype | Transcription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment |
1.1 | | AT3G03640 | 'vtc1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for vtc1 or abi4 |
1.1 | | AT3G03640 | 'Spt4 knock down' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis RNAi knock-down plants of SPT4-1 and SPT4-2 |
-1.1 | | AT3G03640 | 'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '2 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
1.1 | | AT3G03640 | 'drought' vs 'control' in 'wild type; root' | genotype, growth condition, organism part | Role of CAMTA1 gene under drought stress |
1.1 | | AT3G03640 | 'auxin' vs 'none' in '7 day' | age, growth condition | Transcription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin |
1.1 | | AT3G03640 | '3 percent glucose' vs 'none' | compound | Transcription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions |
1.1 | | AT3G03640 | 'phosphate-lacking medium' vs 'complete medium' in 'wild type' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
1.1 | | AT3G03640 | 'cdkf,1-2 T-DNA insertion mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis cdkf;1-2 mutant |
1.1 | | AT3G03640 | 'tunicamycin; 5 microgram per milliliter' vs 'none' in 'bzip17 -/- ; bzip60 -/-' | compound, genotype | mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers |
1.1 | | AT3G03640 | '120 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
1.1 | | AT3G03640 | 'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'wild type' at '3 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout |
-1.1 | | AT3G03640 | 'short (8 hour) days at 20 degrees celsius' vs 'long (16 hour) days at 20 degrees celsius' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis ft-1 mutants |
1.1 | | AT3G03640 | 'oxt6:AtCPSF30' vs 'wild type' | genotype | A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana |
1.1 | | AT3G03640 | '2 hr hypoxia' vs '2 hr control' in 'polysomal mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
1.1 | | AT3G03640 | 'drought' vs 'control' in 'wild type; leaf' | genotype, growth condition, organism part | Role of CAMTA1 gene under drought stress |
1.1 | | AT3G03640 | 'complete solution minus iron; 24 hour' vs 'complete solution; 24 hour' in 'Kas-1' | ecotype, growth condition, time | Transcription profiling by array of Arabidopsis Kas-1 and Tsu-1 ecotypes in response to iron deficiency |
-1.1 | | AT3G03640 | 'Sclerotinia sclerotiorum' vs 'none' in 'coi1-2 mutant' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
1.1 | | AT3G03640 | 'ozone' vs 'control' in 'wild type' at '48 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis G-protein knockout plants in response to ozone |
-1.1 | | AT3G03640 | 'catalase2 mutant' vs 'wild type' in 'transferred to air for 2 days in long day length regime' | genotype, growth condition | Transcription profiling by array of Arabidopsis catalase 2 mutant in response to CO2 level and photoperiod |
-1.1 | | AT3G03640 | 'defense signaling mutant ndr1-1; Verticillium longisporum isolate VL1 (CBS110220)' vs 'defense signaling mutant ndr1-1; mock' | genotype, infect | Expression data roots of Arabidopsis plants inoculated with Verticillium longisporum |
1 | | AT3G03640 | 'mannitol; 300 millimolar' vs 'none' in 'pyl duodecuple loss of function mutant' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
1 | | AT3G03640 | 'Sei-0 x Col-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
1 | | AT3G03640 | 'short Poly(A)-tail; paps1-1' vs 'short Poly(A)-tail; wild type' | RNA, genotype | Genome-wide analysis of PAPS1-dependent polyadenylation identifies novel roles for functionally specialized poly(A) polymerases in Arabidopsis thaliana |
1 | | AT3G03640 | 'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '1 hour' | compound, injury, time | The effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots |
1 | | AT3G03640 | 'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant' | compound, genotype | Transcription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment |
1 | | AT3G03640 | 'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
-1 | | AT3G03640 | 'Sei-0 x Col-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '2 day' | genotype, infect | Transcription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000 |
1 | | AT3G03640 | 'tunicamycin; 5 microgram per milliliter' vs 'none' in 'bzip28 -/-; bzip60 -/-' | compound, genotype | mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers |
1 | | AT3G03640 | 'sodium chloride; 120 millimolar' vs 'control; 0 millimolar' in 'wild type' at '24 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis rsa1-1 mutants under salt stress |
1 | | AT3G03640 | 'KZ-10 x Mrk-0' vs 'KZ-10' | ecotype | Transcription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents |
1 | | AT3G03640 | 'sucrose; 1 percent' vs 'none' in 'RBRcs mutant' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose |
1 | | AT3G03640 | 'mannitol; 300 millimolar' vs 'none' in 'wild type genotype' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
1 | | AT3G03640 | 'sodium chloride; 120 millimolar' vs 'control; 0 millimolar' in 'rsa1-1 mutant' at '24 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis rsa1-1 mutants under salt stress |
-1 | | AT3G03640 | 'antimycin A; 50 micromolar' vs 'water' in 'rao1-2 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A |
-1 | | AT3G03640 | 'rps2 mutant' vs 'wild type genotype' in 'none' at '0 hour' | genotype, infect, time | Expression profiling of Col-0 and rps2 treated with Psm:AvrRpt2 |
1 | | AT3G03640 | 'pvip1;pvip2' vs 'none' | rnai, RNA interference | Transcription profiling by array of Arabidopsis after RNAi-mediated knock-down of pvip1 and pvip2 |
1 | | AT3G03640 | 'transgenics over expressing LecRKVI.2 (OH1)' vs 'wild type' | genotype | Transcriptome profiling of LecRKVI.2 over-expressor plants. |
-1 | | AT3G03640 | '0.5 hour; excess light' vs '0 hour; low light' in 'hsfa1dhsfa2hsfa3 mutant' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis after exposure to excess light |
1 | | AT3G03640 | 'bzr1-1D;bri1-116 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only |
-1 | | AT3G03640 | '42 day' vs '29 day' | age | RNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence |
-1 | | AT3G03640 | 'pkl' vs 'wild type' | genotype | Transcription profiling of Arabidopsis pickle mutants |
1 | | AT3G03640 | '35S::MIF1; dark' vs '35S::MIF1; light' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions |
1 | | AT3G03640 | 'NaCl' vs 'control' in 'cortex cells' | cell type, growth condition | Transcription profiling by array of Arabidopsis root cells after treatment with NaCl |
1 | | AT3G03640 | 'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
1 | | AT3G03640 | 'spx1,spx2 double mutant' vs 'wild type' in 'complete medium' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
-1 | | AT3G03640 | 'pBeaconRFP_IAA7mll overexpressor; none' vs 'pMON999_mRFP control vector; none' | compound, genotype | Transcription profiling by array of Arabidopsis overexpressing IAA7mll or IAA19mll after treatment with indole-3-acetic acid |
1 | | AT3G03640 | 'scrm-D' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings |
-1 | | AT3G03640 | 'low pH (pH 4.6)' vs 'standard pH (pH 5.7)' in 'root stele' | growth condition, organism part | Transcription profiling by array of Arabidopsis root cells after growth in low pH conditions |
1 | | AT3G03640 | 'Piereis brassicae; larval feeding' vs 'none; none' in 'whole plant flowering stage; leaf' | developmental stage, infect, organism part, stimulus | RNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive) |
-1 | | AT3G03640 | '35S:MBS1 overexpression' vs 'fluorescent (flu) mutant' in 'high light' | genotype, growth condition | Transcription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response |
-1 | | AT3G03640 | 'sodium nitroprusside' vs 'none' | compound | Expression data from Arabidopsis thaliana treated with NO donor SNP, compared to NO depletion by cPTIO |
-1 | | AT3G03640 | 'primisulfuron' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after treatment with primisulfuron herbicide |
-1 | | AT3G03640 | 'Meloidogyne incognita infested region' vs 'Meloidogyne incognita non-infested region' at '14 day' | sampling site, time | Transcription profiling by array of Arabidopsis root cells infested with Meloidogyne incognita 14 or 21 days after inoculation |
1 | | AT3G03640 | 'sni-1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for sni1 |
1 | | AT3G03640 | 'NaCl' vs 'control' in 'columella root cap cells' | cell type, growth condition | Transcription profiling by array of Arabidopsis root cells after treatment with NaCl |
1 | | AT3G03640 | 'sub-zero acclimation' vs 'cold acclimation' in 'Rschew' at '24 hour' | ecotype, environmental stress, time | Transcription profiling by array of three Arabidopsis accessions under acclimation to sub-zero temperature at -3 degree Celsius after cold acclimation |
-1 | | AT3G03640 | 'tim23 knockout' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis tim23 knock-out and over-expressing plants compared to wild-type |
-1 | | AT3G03640 | 'tim23 over-expression' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis tim23 knock-out and over-expressing plants compared to wild-type |