AT3G05260

arabidopsis thaliana

Glucose and ribitol dehydrogenase homolog 2

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Arabidopsis thaliana
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Showing 35 experiments:
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
1.0737 × 10-9215.3
AT3G05260'15 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
1.6344 × 10-1710.8
AT3G05260'13 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
4.7855 × 10-168
AT3G05260'12 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
5.7166 × 10-87.2
AT3G05260'phyABCDE quintuple mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, lightTranscription profiling by array of Arabidopsis mutants lacking all phytochromes in response to red light exposure
Adjusted p-valueLog2-fold change
1.5456 × 10-9-7
AT3G05260'abi3-6 mutant' vs 'wild type' in '16 day'age, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 2]
00
Log2-fold change
6.8
AT3G05260'drought environment' vs 'normal watering' in 'vtc2.5 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.2158 × 10-7-6.8
AT3G05260'atbzip16; red-light and long-day (0.5 μmole m-2 sec-1)' vs 'atbzip16; dark'genotype, lightTranscription profiling by array of Arabidopsis early seedling development
Adjusted p-valueLog2-fold change
3.518 × 10-106.7
AT3G05260'GID1b over expression in sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
4.8664 × 10-106.6
AT3G05260'sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
3.8276 × 10-8-6.6
AT3G05260'fus3-3 mutant' vs 'wild type' in '12 day; Col-0'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
2.4846 × 10-86.2
AT3G05260'abscisic acid; 20 micromolar' vs 'none' in 'embryo'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
1.1286 × 10-2785.9
AT3G05260'drought environment' vs 'normal watering' in 'vtc2 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.9272 × 10-85.9
AT3G05260'ozone; 350 nanoliter' vs 'none' in 'Cvi-0'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
7.4503 × 10-5-5.8
AT3G05260'wild type; red-light and long-day (0.5 μmole m-2 sec-1)' vs 'wild type; dark'genotype, lightTranscription profiling by array of Arabidopsis early seedling development
Adjusted p-valueLog2-fold change
4.729 × 10-12-5.6
AT3G05260'abi3-6 mutant' vs 'wild type' in '12 day'age, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 2]
Adjusted p-valueLog2-fold change
6.0738 × 10-95.6
AT3G05260'paclobutrazol; 20 micromolar' vs 'none' in 'embryo'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
3.9768 × 10-45.6
AT3G05260'phyABDE quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, lightTranscription profiling by array of Arabidopsis mutants lacking all phytochromes in response to red light exposure
Adjusted p-valueLog2-fold change
1.0625 × 10-84.7
AT3G05260'drought environment' vs 'normal watering' in 'wild type genotype'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
8.7093 × 10-54.4
AT3G05260'S-nitrosocysteine; 1 millimolar' vs 'buffer'compoundTranscription profiling by high throughput sequencing of Arabidopsis leaf samples infiltrated with S-nitrosocysteine (CysNO)
Adjusted p-valueLog2-fold change
2.3552 × 10-2-3.8
AT3G05260'long day length regimen' at '3 day' vs 'none' at '0 day'growth condition, timeAnalysis of the Arabidopsis shoot meristem transcriptome during floral transition identifies distinct regulatory patterns and an LRR protein that promotes flowering
Adjusted p-valueLog2-fold change
1.2439 × 10-53.7
AT3G05260'350 ppb ozone exposure for 2hr' vs 'none' in 'wild type'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
1.1935 × 10-103.5
AT3G05260'gul2-1 bri1-5 double mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids
Adjusted p-valueLog2-fold change
4.8914 × 10-53.5
AT3G05260'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
2.2629 × 10-113.4
AT3G05260'gul2-1 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids
Adjusted p-valueLog2-fold change
5.5144 × 10-10-3.4
AT3G05260'pif1pif3pif4pif5 (pifq) mutant' vs 'wild type' in 'seedling; darkness'developmental stage, genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for pif1, pif3, pif4 and pif5 after growth in darkness or red light
Adjusted p-valueLog2-fold change
6.5878 × 10-33.4
AT3G05260'abscisic acid; 20 micromolar' vs 'none' in 'endosperm'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
4.5191 × 10-33.3
AT3G05260'wox5-1 mutant' vs 'wild type genotype' in 'wox5 GFP positive'genotype, phenotypeFrom gene networks to network motif dynamics: how the presense of positive feed-back and -forward loops between PERIANTHIA, WUSCHEL-RELATED HOMEOBOX5 and GRF-INTERACTING FACTOR 1 modulates gene expression and function in the Arabidopsis roots.
Adjusted p-valueLog2-fold change
1.1126 × 10-72.9
AT3G05260'Te; 350 ppb ozone exposure for 2hr' vs 'Te; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.5721 × 10-52.9
AT3G05260'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky75 mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
2.8061 × 10-32.9
AT3G05260'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky25, wrky33 double mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
1.694 × 10-212.7
AT3G05260'xrn3-8 mutant' vs 'wild type genotype' in 'total RNA depleted for ribosomal RNA'fraction, genotype, protocolDirect RNA Sequencing of polyadenylated RNA & high-depth Illumina strand-specific, short read RNA-seq of a stably RNAi-silenced nuclear 5'-3' exonuclease XRN3 mutant line in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.0487 × 10-10-2.7
AT3G05260'seed after 48 h of stratification (48 h S)' vs 'seed after 12 h of stratification (12 h S)'growth conditionTranscription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination
Adjusted p-valueLog2-fold change
2.8818 × 10-2-2.4
AT3G05260'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
4.1694 × 10-4-2.3
AT3G05260'pif quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
4.966 × 10-4-2.3
AT3G05260'light regimen for 6 hour' vs 'continuous dark (no light) regimen' in 'wild type'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
6.7952 × 10-4-2.3
AT3G05260'pil5-1' vs 'wild type' in 'far-red light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for pil5 after exposure to red and far-red light or far-red light only
Adjusted p-valueLog2-fold change
1.8541 × 10-2-2.3
AT3G05260'hypoxia' vs 'control' in 'transgenic LeB4::AtHb1'genotype, growth conditionExpression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions
Adjusted p-valueLog2-fold change
1.4527 × 10-32.2
AT3G05260'ga1-3 mutant' vs 'wild type' in 'seed'genotype, organism partTranscription profiling of Arabidopsis seed and flowers of ga1-3 mutant
Adjusted p-valueLog2-fold change
3.1771 × 10-3-2.2
AT3G05260'Blumeria graminis f. sp. hordei K1; avirulent; 18 hour' vs 'none; wild type phenotype; 18 hour'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
4.0824 × 10-32.1
AT3G05260'Pseudomonas syringae DC3000 COR-avrPphB strain' vs 'mock' in 'upf1-5 mutant'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
1.2872 × 10-22.1
AT3G05260'transgenic LeB4::AtHb1' vs 'wild type' in 'control'genotype, growth conditionExpression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions
Adjusted p-valueLog2-fold change
5.3725 × 10-4-1.9
AT3G05260'4 days in darkness and 18 hour in red continuous light' vs '4 days in darkness and 1 hour in red continuous light' in 'wild type'genotype, growth conditionGene expression in pif3 mutant under dark and in wt under Red 1h and Red 18h
Adjusted p-valueLog2-fold change
3.9832 × 10-2-1.9
AT3G05260'cry1' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for cry1 or hfr1
Adjusted p-valueLog2-fold change
1.5968 × 10-7-1.8
AT3G05260'lec1-1 mutant' vs 'wild type' in '12 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
4.6581 × 10-41.8
AT3G05260'dexamethasone and cycloheximide' vs 'control'treatmentTranscription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts
Adjusted p-valueLog2-fold change
5.3422 × 10-51.7
AT3G05260'sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '0 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
1.0363 × 10-4-1.7
AT3G05260'pif1pif3pif4pif5 (pifq) mutant' vs 'wild type genotype'genotypeRNA-seq of coding RNA of Arabidopsis Phytochrome (phy)-Interacting bHLH Factor (PIF) mutants against wild-type controls to study target genes of PIF
Adjusted p-valueLog2-fold change
5.3971 × 10-81.6
AT3G05260'pkl mutant; uniconazole' vs 'wild_type; uniconazole'compound, genotypeTranscription profiling by array of Arabidopsis mutant for pickle after treatment with uniconazole
Adjusted p-valueLog2-fold change
3.0122 × 10-51.6
AT3G05260'GID1b over expression in sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '0 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
1.3594 × 10-3-1.6
AT3G05260'transgenic LeB4::AtHb1' vs 'wild type' in 'hypoxia'genotype, growth conditionExpression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions
Adjusted p-valueLog2-fold change
2.1105 × 10-21.6
AT3G05260'arid2-/-; arid3-/-; arid4-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
2.8303 × 10-21.6
AT3G05260'pp7l-1 loss of function mutant' vs 'wild type genotype'genotypeSERINE/THREONINE-PROTEIN PHOSPHATASE7-LIKE PP7L Regulates Chloroplast Development
Adjusted p-valueLog2-fold change
4.0451 × 10-21.6
AT3G05260'epcr1-/-; epcr2-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
4.0729 × 10-2-1.6
AT3G05260'strigolactone GR24; 2.5 micromolar' vs 'DMSO'compoundTranscription profiling by array of Arabidosis seeds after treatment with EL6 and GR24 to investigate the effect on germination
Adjusted p-valueLog2-fold change
5.8397 × 10-7-1.5
AT3G05260'seed germinating in continuous light 6 h SL' vs 'seed germinating in continuous light 1 h SL'growth conditionTranscription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination
Adjusted p-valueLog2-fold change
3.6184 × 10-41.4
AT3G05260'hypoxia' vs 'control' in 'wild type'genotype, growth conditionExpression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions
Adjusted p-valueLog2-fold change
6.3778 × 10-3-1.4
AT3G05260'fus3-3 mutant' vs 'wild type' in '8 day; Col-0'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
8.1406 × 10-31.4
AT3G05260'long Poly(A)-tail; paps1-1' vs 'long Poly(A)-tail; wild type'RNA, genotypeGenome-wide analysis of PAPS1-dependent polyadenylation identifies novel roles for functionally specialized poly(A) polymerases in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.7239 × 10-51.3
AT3G05260'sodium chloride; 120 millimolar' vs 'control; 0 millimolar' in 'rsa1-1 mutant' at '24 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis rsa1-1 mutants under salt stress
Adjusted p-valueLog2-fold change
1.4517 × 10-3-1.3
AT3G05260'500 ppm carbon dioxide' vs '150 ppm carbon dioxide' in 'wild type'environmental stress, genotypeTranscription profiling by high throughput sequencing of immature aerial tissues of A. thaliana seedlings grown at the low and elevated CO2 concentrations
Adjusted p-valueLog2-fold change
2.3653 × 10-3-1.3
AT3G05260'lec2-1 mutant' vs 'wild type' in '8 day; Ws'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
2.3857 × 10-7-1.2
AT3G05260'pkl mutant; uniconazole' vs 'pkl mutant; no compound'compound, genotypeTranscription profiling by array of Arabidopsis mutant for pickle after treatment with uniconazole
Adjusted p-valueLog2-fold change
1.1447 × 10-51.2
AT3G05260'pif1pif3pif4pif5 (pifq) mutant; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '0 hour' vs 'wild type; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '0 hour'genotype, light, timeExpression data from WT (Columbia) and pifq (pif1pif3pif4pif5) mutant Arabidopsis seedlings
Adjusted p-valueLog2-fold change
1.2662 × 10-41.2
AT3G05260'mdh mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for mdh
Adjusted p-valueLog2-fold change
1.2321 × 10-31.2
AT3G05260'indole-3-acetic acid; 1 hour' vs 'indole-3-acetic acid; 0.5 hour' in 'C24'compound, ecotype, timeTranscription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
2.399 × 10-31.2
AT3G05260'frb1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for frb1
Adjusted p-valueLog2-fold change
3.3785 × 10-2-1.2
AT3G05260'auxin resistant pIAA26::IAA26-P108H-GFP transgenic' vs 'control'genotypeTranscription profiling by high throughput sequencing of Arabidopsis pIAA26::IAA26-P108H-GFP transgenic plants
Adjusted p-valueLog2-fold change
2.3854 × 10-31.1
AT3G05260'RBRcs mutant' vs 'wild type' in 'sucrose; 1 percent'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
2.6206 × 10-3-1.1
AT3G05260'indole-3-acetic acid; 3 hour' vs 'indole-3-acetic acid; 1 hour' in 'C24'compound, ecotype, timeTranscription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
6.4351 × 10-41
AT3G05260'pif1pif3pif4pif5 (pifq) mutant; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '3 hour' vs 'wild type; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '3 hour'genotype, light, timeExpression data from WT (Columbia) and pifq (pif1pif3pif4pif5) mutant Arabidopsis seedlings
Adjusted p-valueLog2-fold change
6.867 × 10-3-1
AT3G05260'40 micromolar; rotenone' vs '0.25 percent; methanol' at '12 hour'compound, timeTranscription profiling by array of Arabidopsis cell cultures treated with rotenone