7.5 | | AT3G54940 | 'RBRcs mutant' vs 'wild type' in 'sucrose; 1 percent' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose |
5.9 | | AT3G54940 | 'epcr1-/-; epcr2-/-' vs 'wild type genotype' | genotype | The PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq] |
-5.8 | | AT3G54940 | 'atbzip16; red-light and long-day (0.5 μmole m-2 sec-1)' vs 'atbzip16; dark' | genotype, light | Transcription profiling by array of Arabidopsis early seedling development |
-5.7 | | AT3G54940 | 'abi3-6 mutant' vs 'wild type' in '16 day' | age, genotype | Gene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 2] |
5.7 | | AT3G54940 | 'phyABCDE quintuple mutant' vs 'wild type' in 'continuous dark (no light) regimen' | genotype, light | Transcription profiling by array of Arabidopsis mutants lacking all phytochromes in response to red light exposure |
5.6 | | AT3G54940 | 'drought environment' vs 'normal watering' in 'vtc2.5 mutant' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
5.2 | | AT3G54940 | 'sucrose; 1 percent' vs 'none' in 'RBRcs mutant' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose |
5 | | AT3G54940 | 'arid2-/-; arid3-/-; arid4-/-' vs 'wild type genotype' | genotype | The PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq] |
4.9 | | AT3G54940 | '15 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
4.7 | | AT3G54940 | 'pkr2 pkl' vs 'wild type' | genotype | Transcription profiling of Arabidopsis pickle mutants |
4.7 | | AT3G54940 | 'tcx2; FEZ:FEZ-GFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
-4.6 | | AT3G54940 | 'long day length regimen' at '3 day' vs 'none' at '0 day' | growth condition, time | Analysis of the Arabidopsis shoot meristem transcriptome during floral transition identifies distinct regulatory patterns and an LRR protein that promotes flowering |
4.5 | | AT3G54940 | 'drought environment' vs 'normal watering' in 'vtc2 mutant' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
-4.5 | | AT3G54940 | 'exposed to 10 degree Celsius; gemin2 mutant; 24 hour' vs 'control; gemin2 mutant' | environmental stress, genotype, time | Genome-wide analysis of wild type and gemin2 mutant plants [cold exposure] |
4.5 | | AT3G54940 | 'tcx2; TMO5:3xGFP' vs 'wild type genotype' | genotype | Transcriptional profile of TCX2 mutant |
-4.3 | | AT3G54940 | 'pif1pif3pif4pif5 (pifq) mutant' vs 'wild type' in 'seedling; darkness' | developmental stage, genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for pif1, pif3, pif4 and pif5 after growth in darkness or red light |
-4.3 | | AT3G54940 | 'seed germinating in continuous light 48 h SL' vs 'seed germinating in continuous light 24 h SL' | growth condition | Transcription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination |
4.2 | | AT3G54940 | 'phyABDE quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen' | genotype, light | Transcription profiling by array of Arabidopsis mutants lacking all phytochromes in response to red light exposure |
4.1 | | AT3G54940 | 'drought environment' vs 'normal watering' in 'wild type genotype' | environmental stress, genotype | Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana |
-3.7 | | AT3G54940 | 'wild type; red-light and long-day (0.5 μmole m-2 sec-1)' vs 'wild type; dark' | genotype, light | Transcription profiling by array of Arabidopsis early seedling development |
3.6 | | AT3G54940 | '13 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
3.6 | | AT3G54940 | '14 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
3.4 | | AT3G54940 | 'gul2-1 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids |
3.4 | | AT3G54940 | '35S::MIF1; dark' vs 'empty pRR2222 vector; dark' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions |
3.3 | | AT3G54940 | 'abscisic acid; 20 micromolar' vs 'none' in 'embryo' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
3.2 | | AT3G54940 | 'paclobutrazol; 20 micromolar' vs 'none' in 'embryo' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
-3.2 | | AT3G54940 | 'cycloheximide' vs 'control' | treatment | Transcription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts |
3.2 | | AT3G54940 | '35S::WRKY23-SRDX' vs 'wild type genotype' in 'auxin; 10 micromolar' | compound, genotype | Microarray designed to find PIN polarity regulators downstream of TIR1/AFB |
3.1 | | AT3G54940 | '12 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
3.1 | | AT3G54940 | '35S::MIF1; dark' vs '35S::MIF1; light' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions |
2.9 | | AT3G54940 | 'gul2-1 bri1-5 double mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids |
-2.9 | | AT3G54940 | 'tt2 mutant' vs 'wild type genotype' | genotype | Gene expression profiling by array of Arabidopsis tt2 mutant |
-2.9 | | AT3G54940 | 'exposed to 10 degree Celsius; wild type; 24 hour' vs 'control; wild type' | environmental stress, genotype, time | Genome-wide analysis of wild type and gemin2 mutant plants [cold exposure] |
2.9 | | AT3G54940 | 'dexamethasone-induced STM overexpression' vs 'wild type' at '216 hour' | phenotype, sampling time point | Transcription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls |
2.9 | | AT3G54940 | 'dexamethasone-induced STM overexpression' vs 'dexamethasone-induced STM knock down by RNAi' at '216 hour' | phenotype, sampling time point | Transcription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls |
2.9 | | AT3G54940 | 'mdh mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for mdh |
2.9 | | AT3G54940 | 'apl mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis phloem from Altered Phloem Development (APL) mutants and wild type controls |
2.9 | | AT3G54940 | 'indole-3-acetic acid; 1 hour' vs 'indole-3-acetic acid; 0.5 hour' in 'C24' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
2.8 | | AT3G54940 | '4 day' vs '0 day' | time | Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development |
2.8 | | AT3G54940 | 'abscisic acid 2 micromolar' vs 'control' in 'SNRK3.15 expression' | growth condition, phenotype | Transcription profiling of DEX-inducible SNRK3.15 Arabidopsis seedlings in the presence of ABA |
-2.7 | | AT3G54940 | 'abi3-6 mutant' vs 'wild type' in '12 day' | age, genotype | Gene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 2] |
2.6 | | AT3G54940 | 'pif1pif3pif4pif5 (pifq) mutant; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '0 hour' vs 'wild type; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '0 hour' | genotype, light, time | Expression data from WT (Columbia) and pifq (pif1pif3pif4pif5) mutant Arabidopsis seedlings |
-2.6 | | AT3G54940 | 'arf6-2, arf8-3 double mutant' vs 'wild type' at 'flowering stage' | developmental stage, genotype | Transcription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant |
2.6 | | AT3G54940 | 'abscisic acid 2 micromolar' vs 'control' in 'no SNRK3.15 expression' | growth condition, phenotype | Transcription profiling of DEX-inducible SNRK3.15 Arabidopsis seedlings in the presence of ABA |
-2.5 | | AT3G54940 | 'myb21-5, myb24-5 double mutant' vs 'wild type' at 'flowering stage' | developmental stage, genotype | Transcription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant |
2.5 | | AT3G54940 | 'pkl' vs 'wild type' | genotype | Transcription profiling of Arabidopsis pickle mutants |
2.5 | | AT3G54940 | 'rrd2 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis temperature-dependent later root fasciation mutants |
2.4 | | AT3G54940 | '35 micromolar; N-lauroylethanolamine (NAE(12:0))' vs '0.05 percent; DMSO' | compound | Transcription profiling of Arabidopsis seedlings treated with NAE(12:0) |
2.4 | | AT3G54940 | 'abscisic acid; 20 micromolar' vs 'none' in 'endosperm' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
2.3 | | AT3G54940 | '10 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
-2.3 | | AT3G54940 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'C24' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
2.3 | | AT3G54940 | 'csn4-1 mutant' vs 'wild type' in 'light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
2.3 | | AT3G54940 | 'pab2 pab8; polysomal RNA' vs 'wild type; polysomal RNA' | RNA, genotype | PAB/WT polysome loading and transcript levels (Arabidopsis thaliana) |
-2.3 | | AT3G54940 | 'indole-3-acetic acid; 3 hour' vs 'indole-3-acetic acid; 1 hour' in 'C24' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
-2.3 | | AT3G54940 | 'sps1' vs 'wild type' | genotype | Expression data from 10-days old dark grown Arabidopsis seedlings of wild type (Col-0), sps1 line and L17 line. |
2.2 | | AT3G54940 | 'PIF5 overexpressing; high red/far-red light ratio' vs 'wild type; high red/far-red light ratio' | genotype, treatment | Phytochrome Interacting Factor 4 and 5 regulate different set of genes in high and low red/far-red light |
2.2 | | AT3G54940 | 'RBRcs mutant' vs 'wild type' in 'none' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose |
-2.2 | | AT3G54940 | 'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar' | compound, genotype | Gene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant |
-2.2 | | AT3G54940 | 'cry1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for cry1 or hfr1 |
2.1 | | AT3G54940 | 'pab2 pab8; total RNA' vs 'wild type; total RNA' | RNA, genotype | PAB/WT polysome loading and transcript levels (Arabidopsis thaliana) |
2.1 | | AT3G54940 | 'pp7l-1 loss of function mutant' vs 'wild type genotype' | genotype | SERINE/THREONINE-PROTEIN PHOSPHATASE7-LIKE PP7L Regulates Chloroplast Development |
-2.1 | | AT3G54940 | 'pft1-1; 16 degree celsius' vs 'pft1-1; 23 degree celsius' | genotype, temperature | PFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis |
-2 | | AT3G54940 | 'fpa-7 loss of function mutant' vs 'wild type genotype' | genotype | Gene expression profiling by RNA-seq of wild-type, fpa mutant, bdr1 mutant, bdr2 mutant, bdr3 mutant and bdrs triple mutant Arabidopsis thaliana seedlings |
2 | | AT3G54940 | 'sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light' | environmental history, genotype, sampling time point | Transcriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b |
2 | | AT3G54940 | 'abscisic acid' vs 'ethanol' | compound | Transcription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea |
1.9 | | AT3G54940 | 'GID1b over expression in sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light' | environmental history, genotype, sampling time point | Transcriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b |
-1.9 | | AT3G54940 | 'strigolactone GR24; 2.5 micromolar' vs 'DMSO' | compound | Transcription profiling by array of Arabidosis seeds after treatment with EL6 and GR24 to investigate the effect on germination |
1.9 | | AT3G54940 | 'phosphate-lacking medium' vs 'complete medium' in 'spx1,spx2 double mutant' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
1.9 | | AT3G54940 | '35S-CalMV::Zat12 mutant' vs 'wild type' in 'no compound' | genotype, growth condition | Transcription profiling by array of Arabidopsis over-expressing Zat12 after treatment with hydrogen peroxide |
1.9 | | AT3G54940 | '35S-CalMV::Zat12 mutant' vs 'wild type' in 'hydrogen peroxide' | genotype, growth condition | Transcription profiling by array of Arabidopsis over-expressing Zat12 after treatment with hydrogen peroxide |
1.8 | | AT3G54940 | 'gun1-103 loss of function mutant' vs 'wild type genotype' | genotype | Functional relationship of Arabidopsis thaliana GUN1 and FUG1 in plastid proteostasis |
1.8 | | AT3G54940 | '5 micromolar gibberellin' vs 'water' at 30 minute | growth condition, time | Transcription profiling by array of Arabidopsis expressing PcGA2ox1 after treatment with gibberellin |
1.7 | | AT3G54940 | 'pif1pif3pif4pif5 (pifq) mutant; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '1 hour' vs 'wild type; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '1 hour' | genotype, light, time | Expression data from WT (Columbia) and pifq (pif1pif3pif4pif5) mutant Arabidopsis seedlings |
1.7 | | AT3G54940 | 'pif1pif3pif4pif5 (pifq) mutant; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '24 hour' vs 'wild type; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '24 hour' | genotype, light, time | Expression data from WT (Columbia) and pifq (pif1pif3pif4pif5) mutant Arabidopsis seedlings |
1.7 | | AT3G54940 | 'pab2 pab8; nonpolysomal RNA' vs 'wild type; nonpolysomal RNA' | RNA, genotype | PAB/WT polysome loading and transcript levels (Arabidopsis thaliana) |
1.7 | | AT3G54940 | 'gct-2' vs 'wild type' | genotype | The Arabidopsis Mediator CDK8 module genes CCT and GCT are global regulators of developmental phase transitions. |
1.6 | | AT3G54940 | 'PIF5 overexpressing; low red/far-red light ratio' vs 'wild type; low red/far-red light ratio' | genotype, treatment | Phytochrome Interacting Factor 4 and 5 regulate different set of genes in high and low red/far-red light |
-1.5 | | AT3G54940 | 'pif quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen' | genotype, growth condition | Transcription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours |
-1.5 | | AT3G54940 | 'lec1-1 mutant' vs 'wild type' in '8 day; Ws' | age, ecotype, genotype | Gene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1] |
1.5 | | AT3G54940 | 'dcl1-15 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis wild-type and dcl1-15 torpedo-staged embryos |
1.5 | | AT3G54940 | 'dicamba; 7 millimolar' vs 'none' | compound | Transcription profiling by array of Arabidopsis after treatment with dicamba |
1.5 | | AT3G54940 | 'fug1-3 loss of function mutant' vs 'wild type genotype' | genotype | Functional relationship of Arabidopsis thaliana GUN1 and FUG1 in plastid proteostasis |
1.5 | | AT3G54940 | 'cct-1' vs 'wild type' | genotype | The Arabidopsis Mediator CDK8 module genes CCT and GCT are global regulators of developmental phase transitions. |
1.4 | | AT3G54940 | 'pif1pif3pif4pif5 (pifq) mutant; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '3 hour' vs 'wild type; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '3 hour' | genotype, light, time | Expression data from WT (Columbia) and pifq (pif1pif3pif4pif5) mutant Arabidopsis seedlings |
1.4 | | AT3G54940 | 'pif1pif3pif4pif5 (pifq) mutant; 3 days in continuous light plus Red/Far-Red ratio 0.006' at '0 hour' vs 'wild type; 3 days in continuous light plus Red/Far-Red ratio 0.006' at '0 hour' | genotype, light, time | Expression data from WT (Columbia) and pifq (pif1pif3pif4pif5) mutant Arabidopsis seedlings |
1.4 | | AT3G54940 | 'pvip1; pvip2 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for pvip1 and pvip2 |
1.4 | | AT3G54940 | 'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
1.4 | | AT3G54940 | 'mbd11 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana |
1.4 | | AT3G54940 | 'gun1-103; fug1-3 double loss of function mutant' vs 'wild type genotype' | genotype | Functional relationship of Arabidopsis thaliana GUN1 and FUG1 in plastid proteostasis |
-1.3 | | AT3G54940 | 'bdr1; brd2; brd3 triple loss of function mutant' vs 'wild type genotype' | genotype | Gene expression profiling by RNA-seq of wild-type, fpa mutant, bdr1 mutant, bdr2 mutant, bdr3 mutant and bdrs triple mutant Arabidopsis thaliana seedlings |
1.3 | | AT3G54940 | 'arr21c overexpressing line' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing arr21c |
1.3 | | AT3G54940 | 'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'spx1,spx2 double mutant' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
-1.3 | | AT3G54940 | 'nano-titania; 500 milligram per liter' vs 'potassium chloride; 0.1 molar' | compound | Expression data from 12-day old Arabidopsis germinants |
1.3 | | AT3G54940 | 'csn3-1 mutant' vs 'wild type' in 'light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
1.3 | | AT3G54940 | '100 micromolar; fenclorim' vs 'control' at '4 hour' | compound, time | Transcription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine |
-1.2 | | AT3G54940 | 'pkl mutant; uniconazole' vs 'pkl mutant; no compound' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for pickle after treatment with uniconazole |
1.2 | | AT3G54940 | '8 day' vs '7 day' in 'wild type' | genotype, sampling time point | Transcription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos |
-1.2 | | AT3G54940 | 'lec1-1 mutant' vs 'wild type' in '12 day; Ws' | age, ecotype, genotype | Gene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1] |
1.2 | | AT3G54940 | 'sodium chloride; 120 millimolar' vs 'control; 0 millimolar' in 'rsa1-1 mutant' at '24 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis rsa1-1 mutants under salt stress |
1.2 | | AT3G54940 | 'phosphate-lacking medium' vs 'complete medium' in 'wild type' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
-1.2 | | AT3G54940 | '4 days in darkness and 18 hour in red continuous light' vs '4 days in darkness and 1 hour in red continuous light' in 'wild type' | genotype, growth condition | Gene expression in pif3 mutant under dark and in wt under Red 1h and Red 18h |
-1.2 | | AT3G54940 | 'L17 phyA' line' vs 'wild type' | genotype | Expression data from 10-days old dark grown Arabidopsis seedlings of wild type (Col-0), sps1 line and L17 line. |
1.2 | | AT3G54940 | 'pft1-1; 23 degree celsius' vs 'wild type; 23 degree celsius' | genotype, temperature | PFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis |
1.2 | | AT3G54940 | 'trichostatin; 1 micromolar' vs 'none' in 'wild type genotype' | compound, genotype | WUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq] |
-1.2 | | AT3G54940 | 'ire1a/ire1b' vs 'wild type' in 'tunicamycin 5 milligram per liter' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ire1 after treatment with tunicamycin |
1.1 | | AT3G54940 | 'dexamethasone' vs 'control' | treatment | Transcription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts |
1.1 | | AT3G54940 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Fei-0' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
-1.1 | | AT3G54940 | 'auxin' vs 'none' in '7 day' | age, growth condition | Transcription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin |
1.1 | | AT3G54940 | 'pUBI10::mCherry-GR-linker-WUS' vs 'wild type genotype' in 'none' | compound, genotype | WUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq] |
-1 | | AT3G54940 | 'fus3-3 mutant' vs 'wild type' in '12 day; Col-0' | age, ecotype, genotype | Gene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1] |
1 | | AT3G54940 | 'rsa1-1 mutant' vs 'wild type' in 'sodium chloride; 120 millimolar' at '24 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis rsa1-1 mutants under salt stress |
1 | | AT3G54940 | 'fip37-4 LEC1:FIP37' vs 'wild type' | genotype | Transcription profiling by high throughput sequencing of Arabidopsis fip37-4 LEC1:FIP37 seedlings |
1 | | AT3G54940 | 'CPL4RNAi' vs 'wild type genotype' | genotype | Salt-stress and CTD phosphatase-like 4 mediate switching of snRNA to mRNA transcription in Arabidopsis thaliana [CPL4(Oto)] |
-1 | | AT3G54940 | 'frs7-1;frs12-1' vs 'wild type genotype' in 'ZT8' | genotype, time | RNA-seq analysis of frs7;frs12 (frsD) double loss-of function lines at different times of the day ZT8 (2pm) and ZT16 (10pm). |