AT4G11610

arabidopsis thaliana

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein

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Arabidopsis thaliana
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Showing 5 experiments:
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
6.9843 × 10-715.5
AT4G11610'Piereis brassicae; larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
7.5601 × 10-1711.4
AT4G11610'rhd6 WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
4.1319 × 10-1711.1
AT4G11610'WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
1.8531 × 10-1010.8
AT4G11610'COBL9::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
1.1759 × 10-17-9.8
AT4G11610'drought environment' vs 'normal watering' in 'vtc2.5 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.8435 × 10-15-9
AT4G11610'drought environment' vs 'normal watering' in 'vtc2 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.7357 × 10-18-7.9
AT4G11610'drought environment' vs 'normal watering' in 'wild type genotype'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.0149 × 10-233-5.2
AT4G11610'light regimen for 6 hour' vs 'continuous dark (no light) regimen' in 'wild type'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
1.3027 × 10-6-5
AT4G11610'polysome-bound RNA; 4 hour; white light' vs'polysome-bound RNA; dark'RNA, time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with white light
Adjusted p-valueLog2-fold change
4.2929 × 10-255-4.6
AT4G11610'det1-1 mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
1.0311 × 10-6-4.5
AT4G11610'steady-state RNA; 4 hour; white light' vs'steady-state RNA; dark'RNA, time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with white light
Adjusted p-valueLog2-fold change
5.1167 × 10-153-4.1
AT4G11610'pif quadruple mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
7.9212 × 10-31-3.4
AT4G11610'myb36-1 (pSCR::ER:GFP)' vs 'wild type (pSCR::ER:GFP)' in 'root endodermis'genotype, organism partTranscription profiling by high throughput sequencing of the endodermis of Arabidopsis myb36 mutants
Adjusted p-valueLog2-fold change
2.8416 × 10-2-3.1
AT4G11610'57 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
2.4579 × 10-2-2.9
AT4G11610'42 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
3.6006 × 10-72.7
AT4G11610'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.5153 × 10-2-2.7
AT4G11610'35 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
1.2181 × 10-10-2.6
AT4G11610'pif1pif3pif4pif5 (pifq) mutant' vs 'wild type' in 'seedling; darkness'developmental stage, genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for pif1, pif3, pif4 and pif5 after growth in darkness or red light
Adjusted p-valueLog2-fold change
7.3847 × 10-6-2.6
AT4G11610'epcr1-/-; epcr2-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
4.7791 × 10-5-2.6
AT4G11610'wild type; red-light and long-day (0.5 μmole m-2 sec-1)' vs 'wild type; dark'genotype, lightTranscription profiling by array of Arabidopsis early seedling development
Adjusted p-valueLog2-fold change
1.1986 × 10-22.5
AT4G11610'empty pRR2222 vector; dark' vs 'empty pRR2222 vector; light'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
8.6052 × 10-8-2.4
AT4G11610'continuous white light' vs 'complete darkness' at '4 h'growth conditionTranscription profiling by array of Arabidopsis after different light treatments
Adjusted p-valueLog2-fold change
2.9097 × 10-6-2.4
AT4G11610'abscisic acids; 100 micromolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
9.5198 × 10-6-2.4
AT4G11610'4 days in darkness and 18 hour in red continuous light' vs '4 days in darkness and 1 hour in red continuous light' in 'wild type'genotype, growth conditionGene expression in pif3 mutant under dark and in wt under Red 1h and Red 18h
Adjusted p-valueLog2-fold change
1.7875 × 10-9-2.3
AT4G11610'continuous far-red light' vs 'complete darkness' at '4 h'growth conditionTranscription profiling by array of Arabidopsis after different light treatments
Adjusted p-valueLog2-fold change
3.1592 × 10-6-2.3
AT4G11610'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
2.5249 × 10-34-2.2
AT4G11610'pif1pif3pif4pif5 (pifq) mutant' vs 'wild type genotype'genotypeRNA-seq of coding RNA of Arabidopsis Phytochrome (phy)-Interacting bHLH Factor (PIF) mutants against wild-type controls to study target genes of PIF
Adjusted p-valueLog2-fold change
5.6252 × 10-7-2.2
AT4G11610'continuous blue light' vs 'complete darkness' at '4 h'growth conditionTranscription profiling by array of Arabidopsis after different light treatments
Adjusted p-valueLog2-fold change
5.2413 × 10-7-2.1
AT4G11610'continuous red light' vs 'complete darkness' at '4 h'growth conditionTranscription profiling by array of Arabidopsis after different light treatments
Adjusted p-valueLog2-fold change
3.0699 × 10-5-2.1
AT4G11610'csn3-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
2.3634 × 10-2-2.1
AT4G11610'35S::MIF1; dark' vs 'empty pRR2222 vector; dark'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
7.3775 × 10-9-2
AT4G11610'arid2-/-; arid3-/-; arid4-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
6.1259 × 10-84-1.9
AT4G11610'1 hour of blue light exposure' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis wild type plants during the shift from dark to blue light
Adjusted p-valueLog2-fold change
5.5273 × 10-6-1.8
AT4G11610'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
2.1329 × 10-8-1.7
AT4G11610'chr11-1, chr17-1 double mutant' vs 'wild type' at '8 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
1.3141 × 10-4-1.7
AT4G11610'atbzip16; red-light and long-day (0.5 μmole m-2 sec-1)' vs 'atbzip16; dark'genotype, lightTranscription profiling by array of Arabidopsis early seedling development
Adjusted p-valueLog2-fold change
3.71 × 10-41.7
AT4G11610'protoplasting' vs 'control'treatmentTranscription profiling by array of Arabidopsis protoplasted root cells after iron deprivation
Adjusted p-valueLog2-fold change
6.1615 × 10-4-1.7
AT4G11610'csn4-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
4.1866 × 10-61.6
AT4G11610'se-2 loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
7.8843 × 10-61.6
AT4G11610'hda6 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants
Adjusted p-valueLog2-fold change
1.0565 × 10-61.5
AT4G11610'se-2; atxr5; atxr6 triple loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
7.3234 × 10-7-1.4
AT4G11610'pif1pif3pif4pif5 (pifq) mutant; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '3 hour' vs 'wild type; 2 days in continuous light plus Red/Far-Red ratio 0.006' at '3 hour'genotype, light, timeExpression data from WT (Columbia) and pifq (pif1pif3pif4pif5) mutant Arabidopsis seedlings
Adjusted p-valueLog2-fold change
1.1499 × 10-41.4
AT4G11610'hda9 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants
Adjusted p-valueLog2-fold change
1.9729 × 10-3-1.4
AT4G11610'pif4; pif5' vs 'wild type' in 'far-red light' at '24 hour'genotype, growth condition, timeTranscription profiling by array of Arabidopsis mutant for pif4 and pif5 after exposure to far-red light
Adjusted p-valueLog2-fold change
5.3133 × 10-81.3
AT4G11610'gul2-1 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids
Adjusted p-valueLog2-fold change
1.1431 × 10-21.3
AT4G11610'apl mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis phloem from Altered Phloem Development (APL) mutants and wild type controls
Adjusted p-valueLog2-fold change
2.1918 × 10-2-1.3
AT4G11610'Phytophthora parasitica' vs 'none' in 'wild type genotype'genotype, infectRNA-sequence of Arabidopsis thaliana lines gsnor1 and Col-0 post infection of Phytophthora parasitica against controls
Adjusted p-valueLog2-fold change
4.658 × 10-61.2
AT4G11610'gul2-1 bri1-5 double mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids
Adjusted p-valueLog2-fold change
1.098 × 10-41.2
AT4G11610'cbp80; atxr5; atxr6 triple loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
1.3453 × 10-4-1.2
AT4G11610'tunicamycin; 5 microgram per milliliter' vs 'none' in 'ire1b mutant'compound, genotypeExploring the link between ER stress and autophagy in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.6596 × 10-3-1.2
AT4G11610'nematode aqueous diffusate' vs 'control'stimulusTranscription profiling by array of Arabidopsis roots treated with nematode aqueous diffusate (NemaWater)
Adjusted p-valueLog2-fold change
1.0597 × 10-2-1.2
AT4G11610'mannitol; 300 millimolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
2.1671 × 10-51.1
AT4G11610'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'spx1,spx2 double mutant'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
2.48 × 10-41.1
AT4G11610'L17 phyA' line' vs 'wild type'genotypeExpression data from 10-days old dark grown Arabidopsis seedlings of wild type (Col-0), sps1 line and L17 line.
Adjusted p-valueLog2-fold change
6.2927 × 10-31.1
AT4G11610'hyl1 loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
2.8178 × 10-21.1
AT4G11610'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'mannitol; 300 millimolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
8.9588 × 10-71
AT4G11610'tcx2; CYCD6:GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
1.0653 × 10-3-1
AT4G11610'5 min UV-A light pulse + 40 min darkness' vs 'complete darkness' at '45 min'growth conditionTranscription profiling by array of Arabidopsis after different light treatments
Adjusted p-valueLog2-fold change
1.3845 × 10-31
AT4G11610'cbp80 loss of function mutant' vs 'wild type genotype'genotypeArabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
Adjusted p-valueLog2-fold change
2.4472 × 10-31
AT4G11610'hid1 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis hid1 mutant seedlings grown under continuous red light
Adjusted p-valueLog2-fold change
5.0186 × 10-31
AT4G11610'hos1-3 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis hos1-3 seedlings
Adjusted p-valueLog2-fold change
7.8039 × 10-31
AT4G11610'fus3-3 mutant' vs 'wild type' in '12 day; Col-0'age, ecotype, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 1]
Adjusted p-valueLog2-fold change
1.0621 × 10-21
AT4G11610'xrn3-8 mutant' vs 'wild type genotype' in 'total RNA depleted for ribosomal RNA'fraction, genotype, protocolDirect RNA Sequencing of polyadenylated RNA & high-depth Illumina strand-specific, short read RNA-seq of a stably RNAi-silenced nuclear 5'-3' exonuclease XRN3 mutant line in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.6489 × 10-21
AT4G11610'hda5 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants
Adjusted p-valueLog2-fold change
3.2217 × 10-2-1
AT4G11610'low pH (pH 4.6)' vs 'standard pH (pH 5.7)' in 'root stele'growth condition, organism partTranscription profiling by array of Arabidopsis root cells after growth in low pH conditions