AT4G14365 (XBAT34)

arabidopsis thaliana

Putative E3 ubiquitin-protein ligase XBAT34

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Arabidopsis thaliana
Organism part
Showing 41 experiments:
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Created with Highcharts 6.2.0adult vascular leafcarpelcauline leafcotyledonflowerflower pedicelfruitfruit septumfruit valvehypocotylleafmixed shoot apical meristem, cotyledon and first leavespetalpetioleplant calluspollenrootroot tiprosette leafseedsepalsiliquestamenstem internodestem node
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Experimental variables
Regulation
Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
00
Log2-fold change
7.4
AT4G14365'ozone; 350 nanoliter' vs 'none' in 'Cvi-0'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
1.4777 × 10-97.3
AT4G14365'cycloheximide' vs 'dimethyl sulfoxide' in '60 micromolar'compoundTranscription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes
Adjusted p-valueLog2-fold change
4.9155 × 10-87
AT4G14365'rhd6 WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
9.4542 × 10-87
AT4G14365'COBL9::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
1.6786 × 10-77
AT4G14365'WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
2.3109 × 10-106.9
AT4G14365'cycloheximide (60 micromolar) and dexamethasone (60 micromolar)' vs 'dimethyl sulfoxide; 60 micromolar'compoundTranscription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes
Adjusted p-valueLog2-fold change
1.6306 × 10-1996.5
AT4G14365'mechanical stimulus - water from spray bottle; 25 minute' vs 'none; 0 minute' in 'wild type genotype'genotype, stimulus, timeRNAseq analysis of early touch responses in myc234 mutants in Arabidopsis
Adjusted p-valueLog2-fold change
1.1859 × 10-76.5
AT4G14365'cycloheximide, dexamethasone' vs 'mock'treatmentTranscription profiling of Arabidopsis WUSCHEL targets
Adjusted p-valueLog2-fold change
2.5162 × 10-126.4
AT4G14365''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 6 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
8.5226 × 10-86.4
AT4G14365'cycloheximide' vs 'mock'treatmentTranscription profiling of Arabidopsis WUSCHEL targets
Adjusted p-valueLog2-fold change
8.9234 × 10-2426.3
AT4G14365'Te; 350 ppb ozone exposure for 2hr' vs 'Te; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
6.5822 × 10-466.3
AT4G14365'350 ppb ozone exposure for 2hr' vs 'control' in 'coi1-16 ein2 sid2'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
6.7703 × 10-11-6.2
AT4G14365'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '8 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
4.1246 × 10-1186.1
AT4G14365'350 ppb ozone exposure for 2hr' vs 'control' in 'tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
1.554 × 10-4-5.8
AT4G14365'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '24 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
7.2938 × 10-90-5.7
AT4G14365'5 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
1.9868 × 10-65.7
AT4G14365'KZ-10 x Mrk-0' vs 'Mrk-0'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
3.397 × 10-85.5
AT4G14365'MYB96 overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing MYB96 or myb96 knock out mutants
Adjusted p-valueLog2-fold change
1.2189 × 10-282-5.4
AT4G14365'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
9.3811 × 10-1395.4
AT4G14365'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky25, wrky33 double mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
6.9865 × 10-1275.4
AT4G14365'ozone; 350 nanoliter' vs 'none' in 'Shahdara'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
2.8658 × 10-405.4
AT4G14365'CT101; 350 ppb ozone exposure for 2hr' vs 'CT101; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.0962 × 10-115.4
AT4G14365''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 10 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
1.2587 × 10-175.3
AT4G14365'Blumeria graminis f. sp. hordei K1; avirulent; 18 hour' vs 'none; wild type phenotype; 18 hour'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.4198 × 10-85.2
AT4G14365'KZ-10 x Mrk-0' vs 'KZ-10'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
1.7074 × 10-65.2
AT4G14365'60 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
2.2202 × 10-55.2
AT4G14365'flg22' vs 'water' at '1 hour'compound, timeTranscription profiling by array of Arabidopsis after treatment with oligogalacturonides
Adjusted p-valueLog2-fold change
5.5087 × 10-225.1
AT4G14365'mechanical stimulus - water from spray bottle; 25 minute' vs 'none; 0 minute' in 'myc324'genotype, stimulus, timeRNAseq analysis of early touch responses in myc234 mutants in Arabidopsis
Adjusted p-valueLog2-fold change
7.2656 × 10-55.1
AT4G14365'ozone 500 parts per billion' vs 'control'growth conditionFunctional Genomics of Ozone Stress in Arabidopsis.
Adjusted p-valueLog2-fold change
7.2656 × 10-55.1
AT4G14365'ozone 500 parts per billion' vs 'control'growth conditionArabidopsis thaliana response to ozone
Adjusted p-valueLog2-fold change
1.0528 × 10-110-5
AT4G14365'14 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
2.357 × 10-55
AT4G14365'oligogalacturonide' vs 'water' at '1 hour'compound, timeTranscription profiling by array of Arabidopsis after treatment with oligogalacturonides
Adjusted p-valueLog2-fold change
2.7242 × 10-88-4.9
AT4G14365'7 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
8.2497 × 10-184-4.8
AT4G14365'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
2.1757 × 10-1754.8
AT4G14365'mechanical stimulation' at '25 minute' vs 'none'stimulus, timeRNAseq on touch-treated Arabidopsis thaliana plants
Adjusted p-valueLog2-fold change
3.2672 × 10-414.8
AT4G14365'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
6.3881 × 10-44.8
AT4G14365'flg22' vs 'water' at '3 hour'compound, timeTranscription profiling by array of Arabidopsis after treatment with oligogalacturonides
Adjusted p-valueLog2-fold change
1.9331 × 10-174-4.7
AT4G14365'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.5575 × 10-8-4.7
AT4G14365'microRNA targeting Umkirch-3 allele of At5g41750' vs 'control'genotypeTranscription profiling of Arabidopsis Umkirch-1/Umkirch-3 hybrid plants compared to siblings carrying a microRNA targeting the Umkirch-3 allele of At5g41750
Adjusted p-valueLog2-fold change
9.724 × 10-84.7
AT4G14365'120 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
2.972 × 10-74.7
AT4G14365'30 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
1.6567 × 10-64.7
AT4G14365'RALF peptide; 1 micromolar' vs 'water'compoundRALF induced transcriptome
Adjusted p-valueLog2-fold change
3.312 × 10-34.7
AT4G14365'ceh1 mutant' vs 'wild type'genotypeTranscriptome of Arabidopsis thaliana ceh1 mutant
Adjusted p-valueLog2-fold change
3.9508 × 10-148-4.6
AT4G14365'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.5002 × 10-101-4.6
AT4G14365'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
2.856 × 10-704.6
AT4G14365'S-nitrosocysteine; 1 millimolar' vs 'buffer'compoundTranscription profiling by high throughput sequencing of Arabidopsis leaf samples infiltrated with S-nitrosocysteine (CysNO)
Adjusted p-valueLog2-fold change
4.9171 × 10-504.6
AT4G14365'35 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
3.7702 × 10-344.6
AT4G14365'350 ppb ozone exposure for 2hr' vs 'none' in 'wild type'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
5.0083 × 10-124.6
AT4G14365'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky75 mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
1.0437 × 10-64.6
AT4G14365'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
6.8471 × 10-64.6
AT4G14365'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
3.7106 × 10-54.5
AT4G14365'Plectosphaerella cucumerina inoculation' vs 'control' in 'agb1-1 mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina
Adjusted p-valueLog2-fold change
2.6184 × 10-594.4
AT4G14365'42 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
2.6879 × 10-124.4
AT4G14365'Mir-0 x Se-0' vs 'Mir-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
6.7202 × 10-124.4
AT4G14365'Blumeria graminis f. sp. hordei A6; virulent; 18 hour' vs 'none; wild type phenotype; 18 hour'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.1484 × 10-94.4
AT4G14365'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for coi1-16 ein2 sid2'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
1.1484 × 10-94.4
AT4G14365'Col-0; 350 ppb ozone exposure for 2hr' vs 'Col-0; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.5352 × 10-64.4
AT4G14365'240 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
5.2129 × 10-54.4
AT4G14365'5-aza-2-deoxycytidine 20 milligram per liter' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ddm1
Adjusted p-valueLog2-fold change
5.3764 × 10-96-4.3
AT4G14365'10 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
9.0897 × 10-26-4.3
AT4G14365'salt and heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
1.0561 × 10-234.3
AT4G14365'wild type; Pseudomonas syringae pv. maculicola str. ES4326' vs 'wild type; mock'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance
Adjusted p-valueLog2-fold change
1.1815 × 10-234.3
AT4G14365'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
2.1024 × 10-9-4.3
AT4G14365'pepr1-1 Pepr2-3; Pep2' at '2 hour' vs 'wild type; Pep2' at '2 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
7.5758 × 10-214.2
AT4G14365'elf18; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.9409 × 10-174.2
AT4G14365'57 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
2.4619 × 10-104.2
AT4G14365'dehydration stress' vs 'control' in 'srk2dei triple mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
1.3294 × 10-94.2
AT4G14365'bleomycin and 2, 6-dichloroisonicotinic acid' vs 'none'stimulusTranscription profiling by array of Arabidopsis seedlings grown after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment to identify synergistically induced defence genes
Adjusted p-valueLog2-fold change
2.0048 × 10-1204.1
AT4G14365'mechanical stimulation' at '40 minute' vs 'none'stimulus, timeRNAseq on touch-treated Arabidopsis thaliana plants
Adjusted p-valueLog2-fold change
8.3271 × 10-114.1
AT4G14365'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-1 mutant'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
6.1629 × 10-74.1
AT4G14365'Plectosphaerella cucumerina inoculation' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina
Adjusted p-valueLog2-fold change
7.1822 × 10-74.1
AT4G14365'480 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
2.3707 × 10-54.1
AT4G14365'0.125 mM gold for 24 hours' vs 'untreated control'growth conditionTranscription profiling by array of roots of hydroponically grown Arabidopsis treated with 0.125 mM gold against untreated control to study the uptake of gold
Adjusted p-valueLog2-fold change
1.9686 × 10-254
AT4G14365'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.1449 × 10-94
AT4G14365'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-2 mutant'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
5.6158 × 10-74
AT4G14365'chitin octamer' vs 'water'compoundTranscription profiling by array of Arabidopsis after treatment with crab shell chitin or chitin octamer
Adjusted p-valueLog2-fold change
8.5336 × 10-74
AT4G14365'1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '3 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)
Adjusted p-valueLog2-fold change
9.5425 × 10-74
AT4G14365'crab shell chitin' vs 'water'compoundTranscription profiling by array of Arabidopsis after treatment with crab shell chitin or chitin octamer
Adjusted p-valueLog2-fold change
1.4047 × 10-6-4
AT4G14365'drought environment' vs 'normal watering' in 'wild type genotype'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.96 × 10-54
AT4G14365'mkk2 knockout; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'mkk2 knockout; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
2.4536 × 10-44
AT4G14365'1 micromolar salicylic acid at ZT24' vs 'water at ZT24' at '3 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)
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Log2-fold change
3.9
AT4G14365'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
8.1165 × 10-93-3.9
AT4G14365'2 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
2.3533 × 10-43.9
AT4G14365'AtGATA2ox transgenic' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing AtGATA2 or mutant for bri1
Adjusted p-valueLog2-fold change
2.9609 × 10-47-3.8
AT4G14365'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.9435 × 10-7-3.8
AT4G14365'efr-1; elf18' at '10 hour' vs 'wild type; elf18' at '10 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
7.9625 × 10-6-3.8
AT4G14365'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '2 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
5.6247 × 10-33.8
AT4G14365'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
00
Log2-fold change
3.7
AT4G14365'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.3253 × 10-883.7
AT4G14365'flg22' vs 'none'stimulusRNA-seq of Arabidopsis thaliana seedlings treated with Flg22 or Pep1
Adjusted p-valueLog2-fold change
1.2006 × 10-413.7
AT4G14365'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
1.4821 × 10-32-3.7
AT4G14365'lyk4/5' vs 'wild type genotype' in 'CO8; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.4007 × 10-28-3.7
AT4G14365'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.4149 × 10-4-3.7
AT4G14365'npr1-3' vs 'wild type' in '3,5-dichloroanthranilic acid' at '2 day'compound, genotype, timeTranscription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid
Adjusted p-valueLog2-fold change
2.0696 × 10-33.7
AT4G14365'cabbage leaf curl virus infected' vs 'mock infected'infectTranscription profiling by array of Arabidopsis infected with geminivirus Cabbage leaf curl virus
Adjusted p-valueLog2-fold change
2.207 × 10-33.7
AT4G14365'30 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
1.4338 × 10-613.6
AT4G14365'pdx3-3 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis pdx3 mutant plants
Adjusted p-valueLog2-fold change
2.4189 × 10-50-3.6
AT4G14365'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.6664 × 10-25-3.6
AT4G14365'heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
2.3197 × 10-223.6
AT4G14365'nlp20; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.1671 × 10-93.6
AT4G14365'salicylic acid' vs 'none' in 'sdh1 mutant'compound, genotypeTranscription profiling by array of Arabidopsis mutant for sdh1 after treatment with salicylic acid
Adjusted p-valueLog2-fold change
2.196 × 10-63.6
AT4G14365"rps10 RNAi; late onset of silencing (P3)" vs "none; wild type"RNA interference, phenotypeMicroarray data sets of Arabidopsis rps10 mutants with RNAi-silenced expression of mitoribosomal S10 protein
Adjusted p-valueLog2-fold change
1.2937 × 10-43.6
AT4G14365'Sclerotinia sclerotiorum' vs 'none' in 'coi1-2 mutant' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
3.9375 × 10-43.6
AT4G14365'vte2 mutant' vs 'wild type' in '3 day'age, genotypeTranscription profiling by array of Arabidopsis mutant for vte1 or vte2
Adjusted p-valueLog2-fold change
1.9645 × 10-723.5
AT4G14365'wrky33 mutant; Botrytis cinerea 2100' vs 'wrky33 mutant; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
6.8706 × 10-10-3.5
AT4G14365'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
3.7712 × 10-73.5
AT4G14365'9 hr hypoxia' vs '9 hr control' in 'polysomal mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
1.1613 × 10-53.5
AT4G14365'syringolin; 20 micromolar' vs 'none' in 'uninfected' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
7.1982 × 10-863.4
AT4G14365'pipecolic acid; 10 micromolar' vs 'none' in 'wild type genotype'block, compound, genotypeTranscriptional response of Arabidopsis thaliana to exogenous application of pipecolic acid
Adjusted p-valueLog2-fold change
6.6346 × 10-823.4
AT4G14365'AtPep1' vs 'none'stimulusRNA-seq of Arabidopsis thaliana seedlings treated with Flg22 or Pep1
Adjusted p-valueLog2-fold change
1.0506 × 10-46-3.4
AT4G14365'4 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
5.1511 × 10-26-3.4
AT4G14365'fmo1 mutant' vs 'wild type genotype' in 'pipecolic acid; 10 micromolar'block, compound, genotypeTranscriptional response of Arabidopsis thaliana to exogenous application of pipecolic acid
Adjusted p-valueLog2-fold change
2.6198 × 10-123.4
AT4G14365'OGs; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.3733 × 10-113.4
AT4G14365'Mir-0 x Se-0' vs 'Se-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
1.8328 × 10-73.4
AT4G14365'9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'total mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
2.1343 × 10-63.4
AT4G14365'dehydration; 46T' vs 'none; 46T'environmental stress, genotypeTranscription factor WRKY46 regulates osmotic stress responses and stomatal movement tissue specifically and independently in Arabidopsis
Adjusted p-valueLog2-fold change
7.2699 × 10-63.4
AT4G14365'met1 mutant' vs 'wild type' at '4 hour'genotype, timeTranscription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours
Adjusted p-valueLog2-fold change
3.6204 × 10-51-3.3
AT4G14365'sd1-29' vs 'wild type genotype' in '3-OH-FA; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.083 × 10-35-3.3
AT4G14365'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
6.5884 × 10-73.3
AT4G14365'antimycin A; 50 micromolar; anac017-1' vs 'water; anac017-1'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
9.828 × 10-73.3
AT4G14365'50 micromolar abscisic acid' vs 'control' in 'srk2dei triple mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
7.6845 × 10-63.3
AT4G14365'Pseudomonas syringae pv tomato DC3000(avrRpt2)' vs 'none' in 'gh3.5-1D heterozygous mutant'genotype, infectTranscription profiling by array of Arabidopsis heterozygous mutant for gh3.5 after inoculation with Pseudomonas syringae pv tomato DC3000(avrRpt2) against wild type counterparts and uninfected controls
Adjusted p-valueLog2-fold change
1.4908 × 10-43.3
AT4G14365'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '6 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
8.7711 × 10-43.3
AT4G14365'Rhizoctonia solani AG8' vs 'mock'infectExpression data in whole Arabidopsis seedlings after treatment with Rhizoctonia solani AG8 and AG2-1
Adjusted p-valueLog2-fold change
9.8198 × 10-43.3
AT4G14365'3,5-dichloroanthranilic acid' vs 'none' in 'wild type' at '2 day'compound, genotype, timeTranscription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid
Adjusted p-valueLog2-fold change
3.3405 × 10-3-3.3
AT4G14365'water deprivation' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after water deprivation
Adjusted p-valueLog2-fold change
4.6801 × 10-33.3
AT4G14365'wild_type; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
8.7864 × 10-33.3
AT4G14365'mkk1;mkk2 knockout; none' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
1.2498 × 10-773.2
AT4G14365'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.2468 × 10-393.2
AT4G14365'C24; 350 ppb ozone exposure for 2hr' vs 'C24; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.1658 × 10-103.2
AT4G14365'chitooctaose; 1 micromolar' vs 'none' in 'erf5/6 double mutant'compound, genotypeComparison of gene expression profiles between erf5/6 and WT Arabidopsis in response to chitooctaose
Adjusted p-valueLog2-fold change
5.6802 × 10-93.2
AT4G14365'sid2-1 mutant; Pseudomonas syringae pv. maculicola str. ES4326' vs 'sid2-1 mutant; mock'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance
Adjusted p-valueLog2-fold change
7.6871 × 10-73.2
AT4G14365'salicylic acid' vs 'none' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis mutant for sdh1 after treatment with salicylic acid
Adjusted p-valueLog2-fold change
5.0122 × 10-43.2
AT4G14365'dehydration; 46T' vs 'dehydration; wild type'environmental stress, genotypeTranscription factor WRKY46 regulates osmotic stress responses and stomatal movement tissue specifically and independently in Arabidopsis
Adjusted p-valueLog2-fold change
4.4668 × 10-33.2
AT4G14365'60 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
7.0183 × 10-33.2
AT4G14365'trichostatin A 2.5 milligram per liter' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ddm1
Adjusted p-valueLog2-fold change
1.7739 × 10-83.1
AT4G14365'low phosphate' vs 'control' in 'none; wild type'compound, genotype, growth conditionTranscription profiling by array of Arabidopsis MKK9DD (constitutively active MKK9 kinase mutant) overexpressing seedlings and Pi-starved wild type seedlings to identify the same regulated genes
Adjusted p-valueLog2-fold change
5.3977 × 10-63.1
AT4G14365'pvip1;pvip2' vs 'none'rnai, RNA interferenceTranscription profiling by array of Arabidopsis after RNAi-mediated knock-down of pvip1 and pvip2
Adjusted p-valueLog2-fold change
6.708 × 10-53.1
AT4G14365'eds16 mutant; Golovinomyces orontii infection' vs 'eds16 mutant; no infection' at 7 daygenotype, infect, timeTranscription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii
Adjusted p-valueLog2-fold change
1.2275 × 10-43.1
AT4G14365'wild type; Golovinomyces orontii infection' vs 'wild type; no infection' at 7 daygenotype, infect, timeTranscription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii
Adjusted p-valueLog2-fold change
6.349 × 10-33.1
AT4G14365'2-hexenal' vs 'mock' at '1 hour'compound, timeTranscription profiling by array of Arabidopsis rosette leaves in response to aerial E-2-hexenal, one of the green leaf volatiles
Adjusted p-valueLog2-fold change
8.8982 × 10-33.1
AT4G14365'Col-0; flg22' vs 'Col-0; none'compound, genotypeTranscription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6
Adjusted p-valueLog2-fold change
9.6995 × 10-643
AT4G14365'pdx3-4 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis pdx3 mutant plants
Adjusted p-valueLog2-fold change
8.3094 × 10-103
AT4G14365'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wild type'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
9.704 × 10-73
AT4G14365'50 micromolar antimycin A' vs 'none'treatmentExpression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue
Adjusted p-valueLog2-fold change
1.8144 × 10-63
AT4G14365'salicylic acid' vs 'control' in 'npr1 sni1 mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for npr1, sni1, ssn2 and/or brca2a after treatment with salicylic acid
Adjusted p-valueLog2-fold change
7.1274 × 10-53
AT4G14365'drought stress' vs 'none' in 'ABF3 overexpression' at '24 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress
Adjusted p-valueLog2-fold change
7.1536 × 10-53
AT4G14365'480 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; root meristem'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
4.3795 × 10-43
AT4G14365'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '3 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
5.5082 × 10-4-3
AT4G14365'0.1 mM nitrate' vs '10 mM nitrate' in 'wild type genotype'genotype, growth conditionTranscriptional profiling of Arabidopsis constitutively expressing Medicago truncatula NRT1 PTR FAMILY 1.7
Adjusted p-valueLog2-fold change
2.014 × 10-33
AT4G14365'HrpZ 10uM' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
7.0071 × 10-33
AT4G14365'pho1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis phosphate deficient mutant pho1
Adjusted p-valueLog2-fold change
1.0835 × 10-23
AT4G14365'2,6-dichloroisonicotinic acid' vs 'none' in 'wild type' at '2 day'compound, genotype, timeTranscription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid
Adjusted p-valueLog2-fold change
3.3791 × 10-1332.9
AT4G14365'12 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.2342 × 10-682.9
AT4G14365'salicylic acid; 0.5 millimolar' vs 'none' in 'wild type genotype'compound, genotypeSalicylic acid-induced gene expression in wild-type Col-0 and mutant upl3-4 Arabidopsis thaliana plants.
Adjusted p-valueLog2-fold change
4.3225 × 10-562.9
AT4G14365'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
7.3223 × 10-19-2.9
AT4G14365'AtRsgA-i homozygous knockout' vs 'wild type genotype'genotypeRNA-seq of Arabidopsis thaliana wild-type and a putative chloroplast ribosome biogenesis mutant AtRsgA homozygous knockout
Adjusted p-valueLog2-fold change
2.7501 × 10-92.9
AT4G14365'50 micromolar abscisic acid' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
4.3585 × 10-92.9
AT4G14365'Bla-1 x Hh-0' vs 'Bla-1'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
3.6028 × 10-72.9
AT4G14365'camta1/2/3 mutant; grown at 22 C and treated at 4 C for 24 hours' vs 'wild type; grown at 22 C and treated at 4 C for 24 hours'genotype, growth conditionExpression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants
Adjusted p-valueLog2-fold change
1.2277 × 10-62.9
AT4G14365'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
4.0664 × 10-62.9
AT4G14365'9 hr hypoxia' vs '9 hr control' in 'total mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
5.5369 × 10-62.9
AT4G14365'9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'polysomal mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
1.6749 × 10-52.9
AT4G14365'Phytophthora infestans' vs 'none' in 'wild type' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
3.1239 × 10-52.9
AT4G14365'antimycin A; 50 micromolar; rao2_EMS_mutant' vs 'water; rao2_EMS_mutant'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
4.2971 × 10-42.9
AT4G14365'scrm-D' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings
Adjusted p-valueLog2-fold change
6.4691 × 10-32.9
AT4G14365'120 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
1.213 × 10-22.9
AT4G14365'Pseudomonas syringae pv. Maculicola with effector AvrRpt2' at '6 hour' vs 'none'time, treatmentExpression profiling of Col-0 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
1.3612 × 10-532.8
AT4G14365'mechanical stimulation' at '60 minute' vs 'none'stimulus, timeRNAseq on touch-treated Arabidopsis thaliana plants
Adjusted p-valueLog2-fold change
1.0611 × 10-92.8
AT4G14365'chitooctaose; 1 micromolar' vs 'none' in 'wild type'compound, genotypeComparison of gene expression profiles between erf5/6 and WT Arabidopsis in response to chitooctaose
Adjusted p-valueLog2-fold change
8.8819 × 10-92.8
AT4G14365'oligomycin' vs 'control' at '4 hour'growth condition, timeEffect of oligomycin on transcript levels in Arabidopsis seedling cultures
Adjusted p-valueLog2-fold change
4.5151 × 10-72.8
AT4G14365'siz1-3' vs 'wild type' in 'control'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for siz1 after exposure to drought
Adjusted p-valueLog2-fold change
4.771 × 10-62.8
AT4G14365'Pseudomonas syringae ES4326' vs 'none' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
1.3893 × 10-52.8
AT4G14365'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
1.5402 × 10-52.8
AT4G14365'15 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
8.376 × 10-52.8
AT4G14365'powdery mildew infected' vs 'uninfected' in 'none' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
1.0244 × 10-32.8
AT4G14365'100 micromolar; 4-chloro-6-methyl-2-phenylpyrimidine' vs 'control' at '4 hour'compound, timeTranscription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine
Adjusted p-valueLog2-fold change
1.4588 × 10-32.8
AT4G14365'Erysiphe orontii' vs 'none' at '120 hour'infect, timeTranscription profiling by array of Arabidopsis after inoculation with Erysiphe orontii
Adjusted p-valueLog2-fold change
1.4734 × 10-32.8
AT4G14365'Turnip mosaic virus' vs 'mock' in 'zone 0'infect, sampling siteTranscription profiling by of Arabidopsis leaves after infection with Potyvirus turnip mosaic virus
Adjusted p-valueLog2-fold change
1.7498 × 10-32.8
AT4G14365'pvip1; pvip2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for pvip1 and pvip2
Adjusted p-valueLog2-fold change
1.7624 × 10-32.8
AT4G14365'nematode aqueous diffusate' vs 'control'stimulusTranscription profiling by array of Arabidopsis roots treated with nematode aqueous diffusate (NemaWater)
Adjusted p-valueLog2-fold change
1.9173 × 10-32.8
AT4G14365'15 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
2.756 × 10-22.8
AT4G14365'ozone' vs 'control' in 'G-protein knockout mutant' at '3 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis G-protein knockout plants in response to ozone
Adjusted p-valueLog2-fold change
3.2258 × 10-562.7
AT4G14365'Phytophthora parasitica' vs 'none' in 'gsnor1'genotype, infectRNA-sequence of Arabidopsis thaliana lines gsnor1 and Col-0 post infection of Phytophthora parasitica against controls
Adjusted p-valueLog2-fold change
1.3862 × 10-522.7
AT4G14365'wild type; Botrytis cinerea 2100' vs 'wild type; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
7.8449 × 10-112.7
AT4G14365'hda5 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants
Adjusted p-valueLog2-fold change
8.2599 × 10-72.7
AT4G14365'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'none' at '0 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
1.4953 × 10-62.7
AT4G14365'siz1-3' vs 'wild type' in 'drought'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for siz1 after exposure to drought
Adjusted p-valueLog2-fold change
2.3341 × 10-62.7
AT4G14365'dexamethasone' vs 'none' in 'MKK9DD mutant; control'compound, genotype, growth conditionTranscription profiling by array of Arabidopsis MKK9DD (constitutively active MKK9 kinase mutant) overexpressing seedlings and Pi-starved wild type seedlings to identify the same regulated genes
Adjusted p-valueLog2-fold change
6.7435 × 10-6-2.7
AT4G14365'homozygous AtCesA4' vs 'heterozygous AtCesA4'genotypeTranscription profiling by array of Arabidopsis cellulose synthase mutants
Adjusted p-valueLog2-fold change
9.0457 × 10-62.7
AT4G14365'ire1a/ire1b' vs 'wild type' in 'tunicamycin 5 milligram per liter'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ire1 after treatment with tunicamycin
Adjusted p-valueLog2-fold change
4.0182 × 10-52.7
AT4G14365'drought stress' vs 'none' in 'control' at '2 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress
Adjusted p-valueLog2-fold change
5.2716 × 10-52.7
AT4G14365'Blumeria graminis f.sp. hordei' vs 'none' in 'ataf1-1'genotype, infectTranscription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei
Adjusted p-valueLog2-fold change
1.466 × 10-32.7
AT4G14365'MtNPF1.7 expression' vs 'wild type genotype' in '0.1 mM nitrate'genotype, growth conditionTranscriptional profiling of Arabidopsis constitutively expressing Medicago truncatula NRT1 PTR FAMILY 1.7
Adjusted p-valueLog2-fold change
1.6069 × 10-32.7
AT4G14365'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
1.7049 × 10-3-2.7
AT4G14365'abscisic acid' vs 'ethanol'compoundTranscription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea
Adjusted p-valueLog2-fold change
8.1482 × 10-32.7
AT4G14365'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
3.5114 × 10-732.6
AT4G14365'Phytophthora parasitica' vs 'none' in 'wild type genotype'genotype, infectRNA-sequence of Arabidopsis thaliana lines gsnor1 and Col-0 post infection of Phytophthora parasitica against controls
Adjusted p-valueLog2-fold change
9.2638 × 10-10-2.6
AT4G14365'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.039 × 10-92.6
AT4G14365'abscisic acids; 50 micromolar' vs 'none' in 'nup85 loss of function mutant'compound, genotypeAn Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress
Adjusted p-valueLog2-fold change
2.9728 × 10-92.6
AT4G14365'pao-1 mutant' vs 'wild type genotype' in 'continuous dark (no light) regimen' at '2 day'environmental stress, genotype, timeTranscriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway
Adjusted p-valueLog2-fold change
1.3086 × 10-52.6
AT4G14365'hst-15 mutant' vs 'wild type' in 'Col-0'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for dcl1, dcl2, hen1, hst, hyl1, rdr1, rdr2, or rdr6
Adjusted p-valueLog2-fold change
1.4372 × 10-42.6
AT4G14365'atx1-1' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for atx1
Adjusted p-valueLog2-fold change
4.9351 × 10-42.6
AT4G14365'scrm-D;mute' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis speechless, scrm-D and scrm-D;mute mutant seedlings
Adjusted p-valueLog2-fold change
1.4549 × 10-32.6
AT4G14365'GST-NPP1 1uM' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
3.6355 × 10-32.6
AT4G14365"rps10 RNAi; early onset of silencing (P2)" vs "none; wild type"RNA interference, phenotypeMicroarray data sets of Arabidopsis rps10 mutants with RNAi-silenced expression of mitoribosomal S10 protein
Adjusted p-valueLog2-fold change
5.5054 × 10-32.6
AT4G14365'flg22; 100 nanomolar; 30 minute' vs 'none; 8 minute' in 'npr1-1'compound, genotype, timeEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Adjusted p-valueLog2-fold change
1.0645 × 10-22.6
AT4G14365'dde2-2; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
1.4531 × 10-2-2.6
AT4G14365'water deprivation' vs 'control' in 'pKYL71-35S::InsP5-ptase (line “T8”)'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation
Adjusted p-valueLog2-fold change
9.7221 × 10-102.5
AT4G14365'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.7202 × 10-72.5
AT4G14365'lsd1-1' vs 'wild type genotype' in 'none'compound, genotypeRNA-seq to investigate dual role of lesion simulating disease 1 as a condition-dependent scaffold protein and transcription regulator in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.2253 × 10-4-2.5
AT4G14365'from low light to high light; wild type' vs 'control; wild type'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
3.9466 × 10-42.5
AT4G14365'480 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
6.1128 × 10-42.5
AT4G14365'wild type; Pseudomonas syringae pv. tomato DC3000' vs 'wild type; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
9.4689 × 10-42.5
AT4G14365'mkk1 knockout; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'mkk1 knockout; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
2.4802 × 10-32.5
AT4G14365'ddm1 mutant' vs 'wild type genotype'genotypeGene expression in Arabidopsis ddm1 mutants with high levels of Transposable Element activity
Adjusted p-valueLog2-fold change
3.3583 × 10-3-2.5
AT4G14365'pad4 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
1.1317 × 10-22.5
AT4G14365'ozone' vs 'control' in 'wild type' at '3 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis G-protein knockout plants in response to ozone
Adjusted p-valueLog2-fold change
1.351 × 10-22.5
AT4G14365'3% mannitol' at '4 hour' vs 'control' at '0 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid
Adjusted p-valueLog2-fold change
2.7483 × 10-22.5
AT4G14365'erf104 knockout; none' vs 'Col-0; none'compound, genotypeTranscription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6
Adjusted p-valueLog2-fold change
6.6779 × 10-6-2.4
AT4G14365'arr22-ox' vs 'wild type' in 'none'genotype, growth conditionTranscription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin
Adjusted p-valueLog2-fold change
1.3681 × 10-52.4
AT4G14365'Rhizoctonia solani AG2-1' vs 'mock'infectExpression data in whole Arabidopsis seedlings after treatment with Rhizoctonia solani AG8 and AG2-1
Adjusted p-valueLog2-fold change
3.5171 × 10-52.4
AT4G14365'camta1/2/3 mutant; grown at 22 C' vs 'wild type; grown at 22 C'genotype, growth conditionExpression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants
Adjusted p-valueLog2-fold change
6.9249 × 10-52.4
AT4G14365'locally damaged by leafminer' vs 'control'growth conditionTranscription profiling by array of Arabidopsis leaves with localised or systemic damage by leafminer Liriomyza huidobrensis
Adjusted p-valueLog2-fold change
7.6188 × 10-52.4
AT4G14365'Phytophthera infestans' vs 'none' at '6 hour'infect, timeTranscription profiling by array of Arabidopsis after infection with Phytophthera infestans
Adjusted p-valueLog2-fold change
1.8114 × 10-4-2.4
AT4G14365'24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei K1; avirulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
2.9372 × 10-42.4
AT4G14365'antimycin A; 50 micromolar; wild type' vs 'water; wild type'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
3.8278 × 10-42.4
AT4G14365'drought stress' vs 'none' in 'control' at '24 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress
Adjusted p-valueLog2-fold change
7.6792 × 10-42.4
AT4G14365'Phytophthora infestans' vs 'none' in 'erp140 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
1.2872 × 10-32.4
AT4G14365'msh1 albino mutant' vs 'wild type'genotypeTranscript profiling of Arabidopsis albino msh1 mutants
Adjusted p-valueLog2-fold change
1.4046 × 10-3-2.4
AT4G14365'oxt6 mutant' vs 'wild type'genotypeA polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.2386 × 10-2-2.4
AT4G14365'Meloidogyne incognita infested region' vs 'Meloidogyne incognita non-infested region' at '14 day'sampling site, timeTranscription profiling by array of Arabidopsis root cells infested with Meloidogyne incognita 14 or 21 days after inoculation
Adjusted p-valueLog2-fold change
2.3695 × 10-22.4
AT4G14365'ein2-1; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
1.5485 × 10-49-2.3
AT4G14365'1 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
4.4455 × 10-442.3
AT4G14365'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.9417 × 10-252.3
AT4G14365'hda6 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants
Adjusted p-valueLog2-fold change
3.2723 × 10-92.3
AT4G14365'csn3-1 mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
5.8405 × 10-62.3
AT4G14365'100 micromolar; 4-chloro-6-methyl-2-phenylpyrimidine' vs 'control' at '24 hour'compound, timeTranscription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine
Adjusted p-valueLog2-fold change
2.1238 × 10-52.3
AT4G14365'Phytophthora infestans' vs 'none' in 'erp2D mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
2.235 × 10-52.3
AT4G14365'bzr1-1D;bri1-116 double mutant' vs 'bri1-116 null mutant'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
3.3681 × 10-52.3
AT4G14365'csn4-1 mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
4.5367 × 10-52.3
AT4G14365'indole-3-acetic acid; 5 micromolar' vs 'none' in 'columella'compound, organism partTranscription profiling by array of four distinct tissues of Arabidopsis root and whole root treated with (auxin) indole-3-acetic acid against mock-treated controls
Adjusted p-valueLog2-fold change
2.7922 × 10-42.3
AT4G14365'ga1-3 mutant' vs 'wild type' in 'flower bud'genotype, organism partTranscription profiling of Arabidopsis seed and flowers of ga1-3 mutant
Adjusted p-valueLog2-fold change
5.3631 × 10-42.3
AT4G14365'35S::ERF104; flg22' vs '35S::ERF104; none'compound, genotypeTranscription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6
Adjusted p-valueLog2-fold change
7.2391 × 10-32.3
AT4G14365'wox5-1 mutant' vs 'wild type genotype' in 'wox5 GFP positive'genotype, phenotypeFrom gene networks to network motif dynamics: how the presense of positive feed-back and -forward loops between PERIANTHIA, WUSCHEL-RELATED HOMEOBOX5 and GRF-INTERACTING FACTOR 1 modulates gene expression and function in the Arabidopsis roots.
Adjusted p-valueLog2-fold change
7.4267 × 10-3-2.3
AT4G14365'water deprivation' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation
Adjusted p-valueLog2-fold change
9.529 × 10-3-2.3
AT4G14365'sps1' vs 'wild type'genotypeExpression data from 10-days old dark grown Arabidopsis seedlings of wild type (Col-0), sps1 line and L17 line.
Adjusted p-valueLog2-fold change
5.7559 × 10-582.2
AT4G14365'mannitol; 300 millimolar' vs 'none' in 'pyl duodecuple loss of function mutant'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.3083 × 10-562.2
AT4G14365'mannitol; 300 millimolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.2181 × 10-34-2.2
AT4G14365'sd1-29' vs 'wild type genotype' in '3-OH-FA; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
7.1494 × 10-232.2
AT4G14365'exposed to 10 degree Celsius; gemin2 mutant; 24 hour' vs 'control; gemin2 mutant'environmental stress, genotype, timeGenome-wide analysis of wild type and gemin2 mutant plants [cold exposure]
Adjusted p-valueLog2-fold change
2.2468 × 10-13-2.2
AT4G14365'mCherry-RAX1-GR' vs 'mCherry-GR' in 'dexamethasone; 10 micromolar'compound, genotypeRNA-seq of Arabidopsis 14 day-old seedlings expressing either mCherry-RAX1-GR or mCherry-GR with 4h mock vs. dexamethasone treatment
Adjusted p-valueLog2-fold change
6.014 × 10-92.2
AT4G14365'low light; DBMIB; 24 micromolar; 0.5 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
8.2466 × 10-82.2
AT4G14365'met1 mutant' vs 'wild type' at '0 hour'genotype, timeTranscription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours
Adjusted p-valueLog2-fold change
1.021 × 10-72.2
AT4G14365'pH 4.5' vs 'pH 6' at 8 hourgrowth condition, timeTranscription profiling by array of Arabidopsis grown at low pH
Adjusted p-valueLog2-fold change
2.0837 × 10-6-2.2
AT4G14365'from low light to high light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
1.3561 × 10-42.2
AT4G14365'camta2/3 mutant; grown at 22 C' vs 'wild type; grown at 22 C'genotype, growth conditionExpression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants
Adjusted p-valueLog2-fold change
2.8917 × 10-42.2
AT4G14365'transgenics over expressing LecRKVI.2 (OH1)' vs 'wild type'genotypeTranscriptome profiling of LecRKVI.2 over-expressor plants.
Adjusted p-valueLog2-fold change
3.3892 × 10-42.2
AT4G14365'tga2;tga5;tga6 mutant; phytoprostane' vs 'Col-0; phytoprostane'compound, genotypeTranscription profiling by array of Arabidopsis mutant for tga2, tga5 and tga6 after treatment with phytoprostane or 12-oxo-phytodienoic acid
Adjusted p-valueLog2-fold change
7.2225 × 10-42.2
AT4G14365'pmr5 pmr6 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for pmr5 and/or pmr6
Adjusted p-valueLog2-fold change
1.9126 × 10-3-2.2
AT4G14365'abscisic acid and dimethylthiourea' vs 'ethanol'compoundTranscription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea
Adjusted p-valueLog2-fold change
3.8755 × 10-32.2
AT4G14365'tor mutant' vs 'wild type' in 'glucose; 15 micromolar'compound, genotypeTranscription profiling by array of Arabidopsis estradiol inducible RNAi-tor seedlings treated with glucose
Adjusted p-valueLog2-fold change
4.3205 × 10-32.2
AT4G14365'240 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
5.643 × 10-32.2
AT4G14365'dehydration; wild type' vs 'none; wild type'environmental stress, genotypeTranscription factor WRKY46 regulates osmotic stress responses and stomatal movement tissue specifically and independently in Arabidopsis
Adjusted p-valueLog2-fold change
1.5108 × 10-31-2.1
AT4G14365'ref4-3; cdk8-1' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1
Adjusted p-valueLog2-fold change
1.2795 × 10-14-2.1
AT4G14365'silver(1+) nitrate, 10 micromolar; N-benzyladenine, 3 micromolar' vs 'silver(1+) nitrate, 10 micromolar'stimulusEthylene-independent Promotion of Photomorphogenesis by Cytokinin Requires a Functional Cytokinin and Light Signaling Pathway.
Adjusted p-valueLog2-fold change
2.0949 × 10-82.1
AT4G14365'35S::WRKY23-SRDX' vs 'wild type genotype' in 'auxin; 10 micromolar'compound, genotypeMicroarray designed to find PIN polarity regulators downstream of TIR1/AFB
Adjusted p-valueLog2-fold change
1.2839 × 10-72.1
AT4G14365'powdery mildew' vs 'none' in 'wild type genotype'genotype, infectTranscription profiling of Arabidopsis callose synthase deficient (pmr4-1) mutant and wild type plants infected with powdery mildew
Adjusted p-valueLog2-fold change
9.9833 × 10-72.1
AT4G14365'fbl17-1 (GK_170-E02)' vs 'wild type genotype'genotypeRNAseq analysis of Arabidopsis Col-0 wild-type and fbl17 mutant seedlings
Adjusted p-valueLog2-fold change
1.9902 × 10-62.1
AT4G14365'cs26 mutant' vs 'wild type' in 'long day photoperiod'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods
Adjusted p-valueLog2-fold change
5.6923 × 10-62.1
AT4G14365'cycloheximide' vs 'control'treatmentTranscription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts
Adjusted p-valueLog2-fold change
6.8107 × 10-62.1
AT4G14365'cdkf,1-2 T-DNA insertion mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis cdkf;1-2 mutant
Adjusted p-valueLog2-fold change
6.0255 × 10-52.1
AT4G14365'tga2;tga5;tga6 mutant; 12-oxo-phytodienoic acid' vs 'Col-0; 12-oxo-phytodienoic acid'compound, genotypeTranscription profiling by array of Arabidopsis mutant for tga2, tga5 and tga6 after treatment with phytoprostane or 12-oxo-phytodienoic acid
Adjusted p-valueLog2-fold change
1.037 × 10-42.1
AT4G14365'hyl1 mutant' vs 'wild type' in 'Col-0'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for dcl1, dcl2, hen1, hst, hyl1, rdr1, rdr2, or rdr6
Adjusted p-valueLog2-fold change
1.2125 × 10-4-2.1
AT4G14365'drought environment' vs 'normal watering' in 'vtc2 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.0144 × 10-32.1
AT4G14365'hypoxia' vs 'normoxia' in 'HRE1-RNAi20'genotype, growth conditionTranscription profiling by array of Arabidopsis with RNAi-mediated knockdown of AtERF73/HRE1 after growth in hypoxic conditions
Adjusted p-valueLog2-fold change
2.8282 × 10-32.1
AT4G14365'myb36-1 (pSCR::ER:GFP)' vs 'wild type (pSCR::ER:GFP)' in 'root endodermis'genotype, organism partTranscription profiling by high throughput sequencing of the endodermis of Arabidopsis myb36 mutants
Adjusted p-valueLog2-fold change
5.6121 × 10-32.1
AT4G14365'Flg-22 1uM' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
6.3265 × 10-32.1
AT4G14365'E2Fa-DPa overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing E2Fa-Dpa
Adjusted p-valueLog2-fold change
1.2537 × 10-22.1
AT4G14365'ADEK1 calpian null' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing DEK1 calpain
Adjusted p-valueLog2-fold change
3.6548 × 10-22.1
AT4G14365'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'wild type' at '3 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
4.966 × 10-17-2
AT4G14365'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
9.8607 × 10-142
AT4G14365'hid1 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis hid1 mutant seedlings grown under continuous red light
Adjusted p-valueLog2-fold change
5.1098 × 10-102
AT4G14365'Pseudomonas syringae DC3000 COR-avrPphB strain' vs 'mock' in 'wild type'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
1.6187 × 10-62
AT4G14365'met1 mutant' vs 'wild type' at '6 hour'genotype, timeTranscription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours
Adjusted p-valueLog2-fold change
4.7097 × 10-52
AT4G14365'nlp20; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
8.6982 × 10-52
AT4G14365'epcr1-/-; epcr2-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
3.1263 × 10-42
AT4G14365'rps2 mutant' vs 'wild type genotype' in 'none' at '0 hour'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
3.7227 × 10-42
AT4G14365'indole-3-acetic acid; 5 micromolar' vs 'none' in 'pericycle'compound, organism partTranscription profiling by array of four distinct tissues of Arabidopsis root and whole root treated with (auxin) indole-3-acetic acid against mock-treated controls
Adjusted p-valueLog2-fold change
1.7267 × 10-32
AT4G14365'bzr1-1D;bri1-116 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
1.2399 × 10-22
AT4G14365'none; 46T' vs 'none; wild type'environmental stress, genotypeTranscription factor WRKY46 regulates osmotic stress responses and stomatal movement tissue specifically and independently in Arabidopsis
Adjusted p-valueLog2-fold change
2.4571 × 10-22
AT4G14365'Phytophthora infestans' vs 'none' in 'wild type' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
2.6965 × 10-22
AT4G14365'35S::ERF104; none' vs 'Col-0; none'compound, genotypeTranscription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6
Adjusted p-valueLog2-fold change
1.715 × 10-23-1.9
AT4G14365'sd1-29' vs 'wild type genotype' in '3-OH-FA; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.1443 × 10-71.9
AT4G14365'mbd6 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.6642 × 10-71.9
AT4G14365'arid2-/-; arid3-/-; arid4-/-' vs 'wild type genotype'genotypeThe PEAT protein complexes are required for histone deacetylation and heterochromatin silencing [RNA-Seq]
Adjusted p-valueLog2-fold change
1.0803 × 10-6-1.9
AT4G14365'low light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
6.9452 × 10-61.9
AT4G14365'wounding; 1 hour' vs 'none; 0 hour' in 'DMSO'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
1.4816 × 10-51.9
AT4G14365'wounding' at '1 hour' vs 'none' at '0 hour'injury, timeTranscriptional response to wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
1.6576 × 10-51.9
AT4G14365'powdery mildew' vs 'none' in 'pmr4-1'genotype, infectTranscription profiling of Arabidopsis callose synthase deficient (pmr4-1) mutant and wild type plants infected with powdery mildew
Adjusted p-valueLog2-fold change
3.3384 × 10-51.9
AT4G14365'240 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; root meristem'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
6.5799 × 10-4-1.9
AT4G14365'psad1-1 stn7-1' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for psae1, psad1 or stn7, or double mutant for psae1 and stn7 or psad1 and stn7
Adjusted p-valueLog2-fold change
1.6672 × 10-31.9
AT4G14365'AFB1 overexpression; Pseudomonas syringae pv. tomato DC3000' vs 'AFB1 overexpression; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
1.6711 × 10-31.9
AT4G14365'gir1 mutant; none' vs 'wild type; none' in 'flower'compound, genotype, organism partGene expression profile in root and flower of gir1 mutant
Adjusted p-valueLog2-fold change
1.7179 × 10-31.9
AT4G14365'camta1/3 mutant; grown at 22 C' vs 'wild type; grown at 22 C'genotype, growth conditionExpression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants
Adjusted p-valueLog2-fold change
3.19 × 10-31.9
AT4G14365'pnp1-1' vs 'wild type' in 'full nutrient medium' at '168 hour'genotype, growth condition, timeTranscription profiling by array of Arabidopsis mutant for pnp after phosphate deprivation
Adjusted p-valueLog2-fold change
6.738 × 10-31.9
AT4G14365'2 hr hypoxia' vs '2 hr control' in 'polysomal mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
8.8353 × 10-3-1.9
AT4G14365'root; phosphate starvation 10 days' vs 'root; mock'organism part, treatmentThe response and recovery of Arabidopsis thaliana transcriptome to phosphate starvation [ATH1-121501]
Adjusted p-valueLog2-fold change
1.1869 × 10-2-1.9
AT4G14365'drought; abi1td' at '0 hour' vs 'drought; wild type' at '0 hour'environmental stress, genotype, timeTranscription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling
Adjusted p-valueLog2-fold change
1.5631 × 10-2-1.9
AT4G14365'18 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei A6; virulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
3.4342 × 10-21.9
AT4G14365'3% glucose' at '2 hour' vs 'control' at '0 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid
Adjusted p-valueLog2-fold change
3.9259 × 10-21.9
AT4G14365'wild type; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
3.3207 × 10-501.8
AT4G14365'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.9495 × 10-10-1.8
AT4G14365'ref8-1 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidospsis ref8-1, med5a/5b, and med5a/5b ref8-1 mutants
Adjusted p-valueLog2-fold change
1.1105 × 10-91.8
AT4G14365'mechanical stimulation' at '10 minute' vs 'none'stimulus, timeRNAseq on touch-treated Arabidopsis thaliana plants
Adjusted p-valueLog2-fold change
2.0917 × 10-91.8
AT4G14365'vtc1' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for vtc1 or abi4
Adjusted p-valueLog2-fold change
2.0566 × 10-81.8
AT4G14365'Sphingomonas melonis Fr1 colonization; Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day'growth condition, infect, sampling time pointLeaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
Adjusted p-valueLog2-fold change
2.5117 × 10-71.8
AT4G14365'ANAC017 OEb' vs 'wild type genotype' at '1 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
6.8583 × 10-71.8
AT4G14365'4.5 micromolar Naphtalenacetic acid and 50 micromolar antimycin A' vs 'none'treatmentExpression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue
Adjusted p-valueLog2-fold change
4.1703 × 10-61.8
AT4G14365'actin2-5' vs 'wild type'genotypeActin Cytoskeleton Integrates Auxin and Brassinosteroid Signaling in Plants.
Adjusted p-valueLog2-fold change
5.4313 × 10-61.8
AT4G14365'Bla-1 x Hh-0' vs 'Hh-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
5.8586 × 10-61.8
AT4G14365'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
2.1156 × 10-51.8
AT4G14365'short Poly(A)-tail; paps1-1' vs 'short Poly(A)-tail; wild type'RNA, genotypeGenome-wide analysis of PAPS1-dependent polyadenylation identifies novel roles for functionally specialized poly(A) polymerases in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
6.069 × 10-51.8
AT4G14365'dexamethasone and cycloheximide' vs 'control'treatmentTranscription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts
Adjusted p-valueLog2-fold change
7.3095 × 10-51.8
AT4G14365'antimycin A; 50 micromolar' vs 'water' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
9.3854 × 10-51.8
AT4G14365'dexamethasone-induced STM overexpression' vs 'wild type' at '72 hour'phenotype, sampling time pointTranscription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
Adjusted p-valueLog2-fold change
1.7039 × 10-41.8
AT4G14365'dehydration stress' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
5.285 × 10-4-1.8
AT4G14365'dexamethasone; 5 micromolar' vs 'none' in 'inducible 35S:LOB-GR line'compound, genotypeTranscriptome analysis of genes regulated by overexpression of LATERAL ORGAN BOUNDARIES (LOB) in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.6002 × 10-4-1.8
AT4G14365'eds16 mutant; Golovinomyces orontii infection' vs 'wild type; Golovinomyces orontii infection' at 5 daygenotype, infect, timeTranscription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii
Adjusted p-valueLog2-fold change
1.2422 × 10-31.8
AT4G14365'dexamethasone-induced STM overexpression' vs 'dexamethasone-induced STM knock down by RNAi' at '216 hour'phenotype, sampling time pointTranscription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
Adjusted p-valueLog2-fold change
1.7591 × 10-31.8
AT4G14365'flg22' vs 'none' in 'wild type'genotype, treatmentTranscription profiling by array of Arabidopsis expressing miR393 or AFB1 under the control of the 35S promoter after treatment with auxin and/or flg22
Adjusted p-valueLog2-fold change
1.8143 × 10-31.8
AT4G14365'primisulfuron' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after treatment with primisulfuron herbicide
Adjusted p-valueLog2-fold change
1.218 × 10-2-1.8
AT4G14365'24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei A6; virulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.2568 × 10-2-1.8
AT4G14365'phyB mutant' vs 'wild type' in '22 degree celsius'genotype, temperatureTranscription profiling by array of Arabidopsis mutant for phyB after growth at different temperatures
Adjusted p-valueLog2-fold change
1.3147 × 10-21.8
AT4G14365'2 hr hypoxia' vs '2 hr control' in 'total mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
2.2178 × 10-2-1.8
AT4G14365'4 degree celsius' vs '20 degree celsius' in 'Landsberg erecta'ecotype, temperatureTranscription profiling by array of nine ecotypes of Arabidopsis before and after cold acclimation
Adjusted p-valueLog2-fold change
2.4527 × 10-21.8
AT4G14365'arf7 arf19 double mutant' vs 'wild type' in 'Root Decelerating Elongation Zone'genotype, organism partTranscription profiling by array of different organism parts of Arabidopsis mutant for arf7 and arf19
Adjusted p-valueLog2-fold change
4.394 × 10-21.8
AT4G14365'warm/hot temperature regimen' vs 'none' in 'wild type genotype'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
1.6826 × 10-421.7
AT4G14365'wrky33 mutant; Botrytis cinerea 2100' vs 'wild type; Botrytis cinerea 2100'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
4.2444 × 10-26-1.7
AT4G14365'cdk8-1' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1
Adjusted p-valueLog2-fold change
5.7987 × 10-211.7
AT4G14365'Pseudomonas syringae DC3000 COR-avrPphB strain' vs 'mock' in 'upf1-5 mutant'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
1.3443 × 10-71.7
AT4G14365'low light; DBMIB; 24 micromolar; 2 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
3.9343 × 10-61.7
AT4G14365'Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day'growth condition, infect, sampling time pointLeaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
Adjusted p-valueLog2-fold change
4.1988 × 10-61.7
AT4G14365'2, 6-dichloroisonicotinic acid' vs 'none'stimulusTranscription profiling by array of Arabidopsis seedlings grown after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment to identify synergistically induced defence genes
Adjusted p-valueLog2-fold change
6.9698 × 10-61.7
AT4G14365'Blumeria graminis f.sp. hordei' vs 'none' in 'wild type'genotype, infectTranscription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei
Adjusted p-valueLog2-fold change
4.0705 × 10-51.7
AT4G14365'indole-3-acetic acid; 5 micromolar' vs 'none' in 'epidermis'compound, organism partTranscription profiling by array of four distinct tissues of Arabidopsis root and whole root treated with (auxin) indole-3-acetic acid against mock-treated controls
Adjusted p-valueLog2-fold change
6.3652 × 10-51.7
AT4G14365'ahk2/ahk3/ahk4 triple mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis ahk mutants
Adjusted p-valueLog2-fold change
1.2851 × 10-41.7
AT4G14365'anac090 loss of function mutant' vs 'wild type genotype'genotypeRegulatory inversion in NAC networks steers the timing of age-dependent cell death in plants [RNA-Seq]
Adjusted p-valueLog2-fold change
2.0757 × 10-4-1.7
AT4G14365'arp6-1' vs 'wild type genotype'genotypeArabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition. [RNA-Seq]
Adjusted p-valueLog2-fold change
9.4255 × 10-41.7
AT4G14365'drought stress' vs 'none' in 'ABF3 overexpression' at '2 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress
Adjusted p-valueLog2-fold change
1.543 × 10-31.7
AT4G14365'optimum photosynthesis temperature' vs 'baseline growth temperature'growth conditionTranscription profiling by array of Arabidopsis after growth at different temperatures
Adjusted p-valueLog2-fold change
1.7963 × 10-3-1.7
AT4G14365'low light; wild type' vs 'control; wild type'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
2.1673 × 10-31.7
AT4G14365'arf2 mutant; none' vs 'Columbia; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for arf2 after treatment with brassinazole
Adjusted p-valueLog2-fold change
2.7887 × 10-31.7
AT4G14365'1-naphthylacetic acid and flg22' vs 'none' in 'wild type'genotype, treatmentTranscription profiling by array of Arabidopsis expressing miR393 or AFB1 under the control of the 35S promoter after treatment with auxin and/or flg22
Adjusted p-valueLog2-fold change
4.5513 × 10-31.7
AT4G14365'flg22' vs 'none' in '35S::miR393'genotype, treatmentTranscription profiling by array of Arabidopsis expressing miR393 or AFB1 under the control of the 35S promoter after treatment with auxin and/or flg22
Adjusted p-valueLog2-fold change
7.0272 × 10-3-1.7
AT4G14365'stn7-1' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for psae1, psad1 or stn7, or double mutant for psae1 and stn7 or psad1 and stn7
Adjusted p-valueLog2-fold change
7.264 × 10-31.7
AT4G14365'pBeaconRFP_IAA7mll overexpressor; none' vs 'pMON999_mRFP control vector; none'compound, genotypeTranscription profiling by array of Arabidopsis overexpressing IAA7mll or IAA19mll after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
8.7518 × 10-31.7
AT4G14365'Zat10 overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing Zat10 under the control of the 35S promoter
Adjusted p-valueLog2-fold change
8.8442 × 10-3-1.7
AT4G14365'er-2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis developing inflorescence tips from er-2 mutant and epfl4, epfl6 double mutant
Adjusted p-valueLog2-fold change
9.3607 × 10-3-1.7
AT4G14365'dorn1-1 mutant' vs 'wild type' in '100 micromolar ATP'genotype, growth conditionATP effect on Arabidopsis roots
Adjusted p-valueLog2-fold change
9.8786 × 10-31.7
AT4G14365'flg22' vs 'none' in '35S::AFB1'genotype, treatmentTranscription profiling by array of Arabidopsis expressing miR393 or AFB1 under the control of the 35S promoter after treatment with auxin and/or flg22
Adjusted p-valueLog2-fold change
1.4489 × 10-21.7
AT4G14365'sni-1' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for sni1
Adjusted p-valueLog2-fold change
1.6781 × 10-21.7
AT4G14365'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '1 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
2.1988 × 10-21.7
AT4G14365'far-red light pulse followed by darkness' vs 'constant white light' in 'petiole'growth condition, organism partTranscription profiling by array of Arabidopsis subjected to far-red light pulse treatment
Adjusted p-valueLog2-fold change
6.286 × 10-14-1.6
AT4G14365'lyk4/5' vs 'wild type genotype' in 'CO8; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
2.9272 × 10-81.6
AT4G14365'3-OH-FA; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
6.6542 × 10-81.6
AT4G14365'At3g24500 overexpression' vs 'wild type'genotypeOver-expression of MBF1c enhances stress tolerance
Adjusted p-valueLog2-fold change
4.1807 × 10-71.6
AT4G14365'CO8; 1 millimolar' vs 'none' in 'wild type genotype' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
7.8751 × 10-71.6
AT4G14365'CPL4RNAi' vs 'wild type genotype'genotypeSalt-stress and CTD phosphatase-like 4 mediate switching of snRNA to mRNA transcription in Arabidopsis thaliana [CPL4(Oto)]
Adjusted p-valueLog2-fold change
4.374 × 10-61.6
AT4G14365'bleomycin' vs 'none'stimulusTranscription profiling by array of Arabidopsis seedlings grown after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment to identify synergistically induced defence genes
Adjusted p-valueLog2-fold change
5.4199 × 10-61.6
AT4G14365'hypoxia' vs 'control' in 'wild type'genotype, growth conditionExpression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions
Adjusted p-valueLog2-fold change
6.6188 × 10-51.6
AT4G14365'12h' vs '4h'organism part, timeTranscription profiling by array of Arabidopsis grown in ambient carbon dioxide and ambient light
Adjusted p-valueLog2-fold change
1.6436 × 10-41.6
AT4G14365'MgCl2' vs 'none' in 'ulp1c/ulp1d double mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
8.3415 × 10-41.6
AT4G14365'coi1-2 mutant' vs 'wild type genotype' in 'Sclerotinia sclerotiorum' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
1.0024 × 10-31.6
AT4G14365'C3H15 overexpressor' vs 'wild type'genotypeExpression data from Arabidopsis C3H14/15 overexpressors, c3h14c3h15 double mutant vs wild type
Adjusted p-valueLog2-fold change
1.3905 × 10-31.6
AT4G14365'srk2dei triple mutant' vs 'wild type' in 'dehydration stress'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3
Adjusted p-valueLog2-fold change
1.6111 × 10-31.6
AT4G14365'wounding' at '3 hour' vs 'none' at '0 hour'injury, timeTranscriptional response to wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
9.5083 × 10-31.6
AT4G14365'triazolopyrimidine' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after treatment with triazolopyrimidine
Adjusted p-valueLog2-fold change
1.0155 × 10-21.6
AT4G14365'arf7 arf19 double mutant' vs 'wild type' in 'Root Early Elongation Zone'genotype, organism partTranscription profiling by array of different organism parts of Arabidopsis mutant for arf7 and arf19
Adjusted p-valueLog2-fold change
1.0411 × 10-2-1.6
AT4G14365'low water potential stress' vs 'control' in 'hai1-2 mutant'genotype, growth conditionComparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant
Adjusted p-valueLog2-fold change
1.2074 × 10-21.6
AT4G14365'Pseudomonas syringae pv tomato DC3000(avrRpt2)' vs 'none' in 'wild type genotype'genotype, infectTranscription profiling by array of Arabidopsis heterozygous mutant for gh3.5 after inoculation with Pseudomonas syringae pv tomato DC3000(avrRpt2) against wild type counterparts and uninfected controls
Adjusted p-valueLog2-fold change
1.444 × 10-2-1.6
AT4G14365'oxt6:AtCPSF30' vs 'wild type'genotypeA polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.6474 × 10-21.6
AT4G14365'camta1/2 mutant; grown at 22 C' vs 'wild type; grown at 22 C'genotype, growth conditionExpression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants
Adjusted p-valueLog2-fold change
1.9763 × 10-2-1.6
AT4G14365'sub-zero acclimation' vs 'cold acclimation' in 'Te-0' at '72 hour'ecotype, environmental stress, timeTranscription profiling by array of three Arabidopsis accessions under acclimation to sub-zero temperature at -3 degree Celsius after cold acclimation
Adjusted p-valueLog2-fold change
3.8354 × 10-2-1.6
AT4G14365'L17 phyA' line' vs 'wild type'genotypeExpression data from 10-days old dark grown Arabidopsis seedlings of wild type (Col-0), sps1 line and L17 line.
Adjusted p-valueLog2-fold change
2.923 × 10-391.5
AT4G14365'Sei-0 x Col-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
9.6663 × 10-101.5
AT4G14365'ref4-3' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
Adjusted p-valueLog2-fold change
3.3727 × 10-71.5
AT4G14365'auxin' vs 'none' in '7 day'age, growth conditionTranscription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin
Adjusted p-valueLog2-fold change
5.0817 × 10-61.5
AT4G14365'antimycin A; 50 micromolar' vs 'water' in 'rao1-1 mutant'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
8.8814 × 10-61.5
AT4G14365'exposed to 10 degree Celsius; wild type; 24 hour' vs 'control; wild type'environmental stress, genotype, timeGenome-wide analysis of wild type and gemin2 mutant plants [cold exposure]
Adjusted p-valueLog2-fold change
2.2629 × 10-51.5
AT4G14365"leaf 8 wounded" vs "unwounded"growth conditionTranscription profiling by array of Arabidopsis leaves either under electric current injection or with distal wound against untreated controls
Adjusted p-valueLog2-fold change
5.6547 × 10-51.5
AT4G14365'chitin' vs 'none' in 'rre2 mutant'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin
Adjusted p-valueLog2-fold change
6.0217 × 10-5-1.5
AT4G14365'Trichoplusia ni feeding' vs 'control' in 'none'environmental stress, infectTranscription profiling of Arabidopsis thaliana leaves as reaction to caterpillar (Trichoplusia ni) feeding and fungi (Laccaria bicolor) infection of the roots
Adjusted p-valueLog2-fold change
7.2337 × 10-51.5
AT4G14365'ANAC017 OEa' vs 'wild type genotype' at '1 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
1.2699 × 10-41.5
AT4G14365'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
2.4711 × 10-41.5
AT4G14365'sulfometuron methyl' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after treatment with sulfometuron methyl herbicide
Adjusted p-valueLog2-fold change
2.5389 × 10-4-1.5
AT4G14365'500 micromolar; phosphate' vs 'none' in 'control'compound, growth conditionTranscription profiling by array of Arabidopsis roots grown with different concentrations of phosphate
Adjusted p-valueLog2-fold change
3.0185 × 10-41.5
AT4G14365'Pseudomonas syringae pv. tomato' vs 'none' in 'ulp1c/ulp1d double mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
3.6882 × 10-41.5
AT4G14365'edr1 mutant' vs 'wild type' in 'Golovinomyces cichoracearum' at '18 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for edr1 after infection with Golovinomyces cichoracearum
Adjusted p-valueLog2-fold change
8.4972 × 10-4-1.5
AT4G14365'rdr6-15 mutant' vs 'wild type' in 'Col-0'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for dcl1, dcl2, hen1, hst, hyl1, rdr1, rdr2, or rdr6
Adjusted p-valueLog2-fold change
1.0516 × 10-31.5
AT4G14365'Heterodera schachtii' vs 'none'infectTranscription profiling by array of Arabidopsis roots infected with the cyst nematode H. schachtii
Adjusted p-valueLog2-fold change
1.565 × 10-31.5
AT4G14365'dcl1-7 mutant' vs 'wild type' in 'Ler'ecotype, genotypeTranscription profiling by array of Arabidopsis mutant for dcl1, dcl2, hen1, hst, hyl1, rdr1, rdr2, or rdr6
Adjusted p-valueLog2-fold change
4.4394 × 10-31.5
AT4G14365'pmr5 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for pmr5 and/or pmr6
Adjusted p-valueLog2-fold change
1.1576 × 10-21.5
AT4G14365'PAP, 100 micromolar; lithium chloride, 100 millimolar; ATP, 1 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
1.4222 × 10-21.5
AT4G14365'PAP, 100 micromolar; lithium chloride, 100 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
1.8742 × 10-21.5
AT4G14365'100 micromolar ATP' vs 'control' in 'wild type'genotype, growth conditionATP effect on Arabidopsis roots
Adjusted p-valueLog2-fold change
3.207 × 10-21.5
AT4G14365'arf7 arf19 double mutant' vs 'wild type' in 'Root Apical Meristem'genotype, organism partTranscription profiling by array of different organism parts of Arabidopsis mutant for arf7 and arf19
Adjusted p-valueLog2-fold change
1.1243 × 10-13-1.4
AT4G14365'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.7624 × 10-121.4
AT4G14365'Pseudomonas syringae DC3000 COR- strain' vs 'mock' in 'upf1-5 mutant'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
1.3118 × 10-5-1.4
AT4G14365'ga1 muant and SCL3 overexpression' vs 'ga1 mutant'genotypeArabidopsis thaliana roots at 7DAG; ga1, ga1 scl3 (LOF) and ga1 SCL3 OE (GOF)
Adjusted p-valueLog2-fold change
2.2065 × 10-51.4
AT4G14365'Pseudomonas syringae pv. tomato expressing HopZ1a' vs 'MgCl2' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
6.2469 × 10-51.4
AT4G14365'AT4G01050 knock out' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis TROL knock-out plants
Adjusted p-valueLog2-fold change
1.1465 × 10-41.4
AT4G14365'spx1,spx2 double mutant' vs 'wild type' in 'complete medium'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
1.1531 × 10-41.4
AT4G14365'trasngenic REVOLUTA fused to GR domain' vs 'wild type genotype' in 'Collection day one' at '0 minute'block, genotype, timeExpression data from Arabidopsis GR-REVOLUTA and KANADI1-GR transgenic seedlings
Adjusted p-valueLog2-fold change
1.2327 × 10-41.4
AT4G14365'transgenic LeB4::AtHb1' vs 'wild type' in 'control'genotype, growth conditionExpression data from siliques of wild type and AtHb1-overexpressing plants under moderate hypoxia and standard conditions
Adjusted p-valueLog2-fold change
2.1604 × 10-41.4
AT4G14365'csn3-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
2.6101 × 10-41.4
AT4G14365'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Bur-0'compound, ecotype, timeTranscription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
3.2257 × 10-41.4
AT4G14365'dexamethasone-induced STM overexpression' vs 'dexamethasone-induced STM knock down by RNAi' at '72 hour'phenotype, sampling time pointTranscription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
Adjusted p-valueLog2-fold change
4.821 × 10-41.4
AT4G14365'vtc2' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for abi4 and/or vtc2
Adjusted p-valueLog2-fold change
4.8523 × 10-41.4
AT4G14365'antimycin A; 50 micromolar' vs 'water' in 'rao1-2 mutant'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
6.4165 × 10-41.4
AT4G14365'Phytophthora infestans' vs 'none' in 'erp2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
4.43 × 10-3-1.4
AT4G14365'35S:LSD1-GFP' vs 'dexamethasone; 30 micromolar; 35S:LSD1-GR'compound, genotypeRNA-seq to investigate dual role of lesion simulating disease 1 as a condition-dependent scaffold protein and transcription regulator in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.5408 × 10-3-1.4
AT4G14365'AGL15 overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for agl15 and agl18 or overexpressing AGL15 during somatic embryogenesis
Adjusted p-valueLog2-fold change
5.2732 × 10-31.4
AT4G14365'96h' vs '48h'organism part, timeTranscription profiling by array of Arabidopsis grown in elevated carbon dioxide levels in ambient light
Adjusted p-valueLog2-fold change
1.2602 × 10-2-1.4
AT4G14365'catalase2 mutant' vs 'wild type' in 'transferred to air for 2 days in long day length regime'genotype, growth conditionTranscription profiling by array of Arabidopsis catalase 2 mutant in response to CO2 level and photoperiod
Adjusted p-valueLog2-fold change
1.3471 × 10-21.4
AT4G14365'wounding; 3 hour' vs 'none; 0 hour' in 'DMSO'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
2.0414 × 10-21.4
AT4G14365'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
2.4672 × 10-21.4
AT4G14365'systemically wounded' vs 'unwounded control'injuryTranscription profiling by array of Arabidopsis distal leaves in response to wounding
Adjusted p-valueLog2-fold change
2.5162 × 10-21.4
AT4G14365'sid2-2; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection'genotype, infect, sampling time pointResponses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection
Adjusted p-valueLog2-fold change
3.3025 × 10-2-1.4
AT4G14365'iron; 100 micromolar' vs 'none' in 'bhlh100/101 double mutant; shoot'compound, genotype, organism partExpression data from Arabidopsis roots and shoots grown with or without iron
Adjusted p-valueLog2-fold change
4.8601 × 10-2-1.4
AT4G14365'dimethylthiourea' vs 'ethanol'compoundTranscription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea
Adjusted p-valueLog2-fold change
6.1585 × 10-81.3
AT4G14365'fip37-4 LEC1:FIP37' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis fip37-4 LEC1:FIP37 seedlings
Adjusted p-valueLog2-fold change
1.5008 × 10-71.3
AT4G14365'benzothiadiazole' vs 'control'growth conditionTranscription profiling by array of Arabidopsis overexpressing mil4 after treatment with benzothiadiazole
Adjusted p-valueLog2-fold change
2.4861 × 10-6-1.3
AT4G14365'rlt1-1 rlt2-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis rlt1-1 rlt2-1 mutants
Adjusted p-valueLog2-fold change
3.4746 × 10-61.3
AT4G14365'hypoxia' vs 'normoxia' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis with RNAi-mediated knockdown of AtERF73/HRE1 after growth in hypoxic conditions
Adjusted p-valueLog2-fold change
4.1671 × 10-6-1.3
AT4G14365'camta1-3 mutant' vs 'wild type' in 'control; root'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
2.0781 × 10-51.3
AT4G14365'sodium chloride; 150 millimolar' vs 'none' in 'snrk2.1/2.4/2.5/2.9/2.10 quintuple mutant'compound, genotypeRNA-seq of Arabidopsis Col-0, snrk2.4, double snrk2.4/2.10 and quintuple snrk2.1/2.4/2.5/2.9/2.10 mutants from control (0mM) and salt stress (150mM NaCl for 1hour) treatment.
Adjusted p-valueLog2-fold change
3.6149 × 10-51.3
AT4G14365'myb36-1 mutant' vs 'wild type' in 'root'genotype, organism partTranscription profiling by high throughput sequencing of the endodermis of Arabidopsis myb36 mutants
Adjusted p-valueLog2-fold change
4.7252 × 10-51.3
AT4G14365'12h' vs '4h'organism part, timeTranscription profiling by array of Arabidopsis grown in elevated carbon dioxide levels in ambient light
Adjusted p-valueLog2-fold change
6.1629 × 10-51.3
AT4G14365'96h' vs '48h'organism part, timeTranscription profiling by array of Arabidopsis grown in ambient carbon dioxide and ambient light
Adjusted p-valueLog2-fold change
6.7552 × 10-5-1.3
AT4G14365'cs26 mutant' vs 'wild type' in 'short day photoperiod'genotype, growth conditionTranscription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods
Adjusted p-valueLog2-fold change
1.5582 × 10-41.3
AT4G14365'clf28 mutant' vs 'wild type' in 'root'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
1.7491 × 10-41.3
AT4G14365'bzip17 -/- ; bzip28 -/-' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
2.0735 × 10-41.3
AT4G14365'indole-3-acetic acid; 5 micromolar' vs 'none' in 'whole root'compound, organism partTranscription profiling by array of four distinct tissues of Arabidopsis root and whole root treated with (auxin) indole-3-acetic acid against mock-treated controls
Adjusted p-valueLog2-fold change
2.2721 × 10-4-1.3
AT4G14365'500 micromolar; phosphate' vs 'none' in 'split root'compound, growth conditionTranscription profiling by array of Arabidopsis roots grown with different concentrations of phosphate
Adjusted p-valueLog2-fold change
6.5349 × 10-41.3
AT4G14365'tt4' vs 'wild type'genotypeTranscriptome analysis in flavonoid overaccumulating and lacking Arabidopsis.
Adjusted p-valueLog2-fold change
2.0413 × 10-31.3
AT4G14365'atsf1-2 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis wild type and atsf1-2 mutant seedlings
Adjusted p-valueLog2-fold change
3.1662 × 10-3-1.3
AT4G14365'35S::C2' vs 'control' in 'methyl jasmonate'compound, genotypeTranscription profiling by array of Arabidopsis expressing genimivirus C2 under the control of the 35S promoter after treatment with methyl jasmonate
Adjusted p-valueLog2-fold change
4.1474 × 10-31.3
AT4G14365'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '3 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
5.7758 × 10-31.3
AT4G14365'2,6-dichloroisonicotinic acid' vs 'none' in 'wild type' at '6 day'compound, genotype, timeTranscription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid
Adjusted p-valueLog2-fold change
5.9051 × 10-3-1.3
AT4G14365'high light; wild type' vs 'control; wild type'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
7.1713 × 10-31.3
AT4G14365'WOX1-2' vs 'wild type'genotypeTranscriptome analysis in flavonoid overaccumulating and lacking Arabidopsis.
Adjusted p-valueLog2-fold change
8.0794 × 10-31.3
AT4G14365'12 hour (dark)' vs '0 hour (light)'growth condition, timeTranscription profiling of diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
Adjusted p-valueLog2-fold change
9.4173 × 10-31.3
AT4G14365'ASL9 overexpressor' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing ASL9
Adjusted p-valueLog2-fold change
1.1779 × 10-21.3
AT4G14365'Phytophthora infestans' vs 'none' in 'erp140 mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
1.2252 × 10-21.3
AT4G14365'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '6 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
2.5806 × 10-21.3
AT4G14365'CL37' vs 'fae1 mutant' in '11 to 12 DPA'developmental stage, genotypeRNASeq of Developing Arabidopsis Seeds Producing Hydroxy-Fatty Acids
Adjusted p-valueLog2-fold change
4.2363 × 10-21.3
AT4G14365'systemically damaged by leafminer' vs 'control'growth conditionTranscription profiling by array of Arabidopsis leaves with localised or systemic damage by leafminer Liriomyza huidobrensis
Adjusted p-valueLog2-fold change
4.3398 × 10-21.3
AT4G14365'lithium chloride, 100 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
4.9982 × 10-21.3
AT4G14365'total RNA; turnip mosaic virus inoculated' vs 'total RNA; mock'RNA, infectThe effect of TuMV on translation initiation in Arabidopsis
Adjusted p-valueLog2-fold change
1.5363 × 10-141.2
AT4G14365'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.9124 × 10-91.2
AT4G14365'anac017 loss of function mutant' vs 'wild type genotype'genotypeRegulatory inversion in NAC networks steers the timing of age-dependent cell death in plants [RNA-Seq]
Adjusted p-valueLog2-fold change
6.336 × 10-81.2
AT4G14365'Laccaria bicolor' vs 'none'infectTranscription profiling of Arabidopsis thaliana leaves as reaction to fungi (Laccaria bicolor) infection of the roots
Adjusted p-valueLog2-fold change
2.4751 × 10-71.2
AT4G14365'Pseudomonas syringae DC3000 COR-deltahrpS strain' vs 'mock' in 'upf1-5 mutant'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
9.2562 × 10-6-1.2
AT4G14365'pepr1-1 Pepr2-3; Pep2' at '10 hour' vs 'wild type; Pep2' at '10 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
2.622 × 10-51.2
AT4G14365'imidazolinone' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after treatment with imidazolinone
Adjusted p-valueLog2-fold change
6.1466 × 10-5-1.2
AT4G14365'high light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
6.8588 × 10-51.2
AT4G14365'chitin' vs 'none' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin
Adjusted p-valueLog2-fold change
7.9704 × 10-51.2
AT4G14365'csn4-1 mutant' vs 'wild type' in 'dark'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
1.1271 × 10-41.2
AT4G14365'double mutant at3g03940/at518190 knockdown' vs 'wild type'genotypeOsmotic stress induces phosphorylation of histone H3 at threonine 3 in pericentromeric regions of Arabidopsis thaliana [expression]
Adjusted p-valueLog2-fold change
5.7158 × 10-41.2
AT4G14365'atnusg mutant' vs 'wild type genotype'genotypeRNA-sequence to compare the transcriptional profiles of nuclear and plastidic genes in the atnusg and the wild-type
Adjusted p-valueLog2-fold change
7.6976 × 10-41.2
AT4G14365'AP1::AtIPT4 transgenic plant' vs 'wild type'genotypeTranscription profiling by array of young inflorescences of AP1∷AtIPT4 Arabidopsis thaliana transgenic plants to identify the candidate genes responsive to cytokinin
Adjusted p-valueLog2-fold change
1.5778 × 10-31.2
AT4G14365'elf18; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.7201 × 10-3-1.2
AT4G14365'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
1.8659 × 10-31.2
AT4G14365'Erysiphe orontii' vs 'none' at '72 hour'infect, timeTranscription profiling by array of Arabidopsis after inoculation with Erysiphe orontii
Adjusted p-valueLog2-fold change
2.1151 × 10-31.2
AT4G14365'120 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; root meristem'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
4.0605 × 10-31.2
AT4G14365'inducible 35S:LOB-GR line' vs 'wild type' in 'none'compound, genotypeTranscriptome analysis of genes regulated by overexpression of LATERAL ORGAN BOUNDARIES (LOB) in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
8.614 × 10-31.2
AT4G14365'oas-a1.1' vs 'wild type' in 'CdCl2-treated root' at '18 hour'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis mutant for oas-a1 after treatment with cadmium chloride
Adjusted p-valueLog2-fold change
8.9672 × 10-31.2
AT4G14365'Erysiphe orontii' vs 'none' at '96 hour'infect, timeTranscription profiling by array of Arabidopsis after inoculation with Erysiphe orontii
Adjusted p-valueLog2-fold change
1.1221 × 10-2-1.2
AT4G14365'dexamethasone; 10 micromolar' vs 'dimethyl sulfoxide; 0.01 percent' in 'mCherry-RAX1-GR'compound, genotypeRNA-seq of Arabidopsis 14 day-old seedlings expressing either mCherry-RAX1-GR or mCherry-GR with 4h mock vs. dexamethasone treatment
Adjusted p-valueLog2-fold change
1.1598 × 10-21.2
AT4G14365'bzip1, bzip53 double knockout' vs 'wild type' in 'sodium chloride; 150 millimolar' at '3 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
1.8017 × 10-2-1.2
AT4G14365'drought environment' vs 'normal watering' in 'vtc2.5 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.8428 × 10-21.2
AT4G14365'oligogalacturonide' vs 'water' at '3 hour'compound, timeTranscription profiling by array of Arabidopsis after treatment with oligogalacturonides
Adjusted p-valueLog2-fold change
2.1722 × 10-2-1.2
AT4G14365'cry1' vs 'wild type' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for cry1 or hy5 after growth in high light or blue light
Adjusted p-valueLog2-fold change
2.296 × 10-21.2
AT4G14365'120 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; root meristem'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
2.3794 × 10-2-1.2
AT4G14365'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
2.8777 × 10-21.2
AT4G14365'arf7 arf19 double mutant' vs 'wild type' in 'Root Mature Zone'genotype, organism partTranscription profiling by array of different organism parts of Arabidopsis mutant for arf7 and arf19
Adjusted p-valueLog2-fold change
3.269 × 10-2-1.2
AT4G14365'ethanol-inducible TOC1 transgenic line' vs 'wild type' in 'control; 12 days in LD + 1 day in constant light (LL)'compound, genotype, growth conditionGene expression from Inducible TOC1 expression in Arabidopsis seedlings
Adjusted p-valueLog2-fold change
3.3352 × 10-21.2
AT4G14365'polysomal RNA; turnip mosaic virus inoculated' vs 'polysomal RNA; mock'RNA, infectThe effect of TuMV on translation initiation in Arabidopsis
Adjusted p-valueLog2-fold change
3.5064 × 10-21.2
AT4G14365'pBeaconRFP_IAA19mll overexpressor; none' vs 'pMON999_mRFP control vector; none'compound, genotypeTranscription profiling by array of Arabidopsis overexpressing IAA7mll or IAA19mll after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
3.6558 × 10-2-1.2
AT4G14365'ethanol; 2.5 percent' vs 'control' in 'wild type; 12 days in LD + 1 day in constant light (LL)'compound, genotype, growth conditionGene expression from Inducible TOC1 expression in Arabidopsis seedlings
Adjusted p-valueLog2-fold change
4.159 × 10-2-1.2
AT4G14365'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 gpa1-4 double mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
6.9395 × 10-181.1
AT4G14365'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'mannitol; 300 millimolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
2.6599 × 10-6-1.1
AT4G14365'camta1-3 mutant' vs 'wild type' in 'drought; root'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
1.8566 × 10-51.1
AT4G14365'chr11-1 chr17-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis chr11-1 chr17-1 mutants
Adjusted p-valueLog2-fold change
5.0283 × 10-51.1
AT4G14365'Rapamycin-sensitive TOR knockdown (BP12-2)' vs 'wild type genotype'genotypeRNA-seq of coding RNA of Arabidopsis TOR-suppressed lines treated with rapamycin
Adjusted p-valueLog2-fold change
5.2305 × 10-51.1
AT4G14365'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'wild type'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
1.0572 × 10-41.1
AT4G14365'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Bay-0'compound, ecotype, timeTranscription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
1.0817 × 10-41.1
AT4G14365'chitin' vs 'none' in 'rre1 mutant'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin
Adjusted p-valueLog2-fold change
1.4447 × 10-41.1
AT4G14365'dexamethasone; CHLD reduction' vs 'dexamethasone; control'compound, phenotypeExpression data from Arabidopsis thaliana seedlings with altered enzymes activity of the tetrapyrrole biosynthesis pathway
Adjusted p-valueLog2-fold change
4.9661 × 10-4-1.1
AT4G14365'sodium chloride; 50 millimolar; atpao5-3 mutant' vs 'none; ; atpao5-3 mutant'compound, genotypeTranscription profiling by array of Arabidopsis wild type and polyamine oxidase 5 loss-of-function mutant exposed to sodium chloride
Adjusted p-valueLog2-fold change
7.2562 × 10-41.1
AT4G14365'oligomycin' vs 'control' at '1 hour'growth condition, timeEffect of oligomycin on transcript levels in Arabidopsis seedling cultures
Adjusted p-valueLog2-fold change
8.9853 × 10-41.1
AT4G14365'Phytophthera infestans' vs 'none' at '12 hour'infect, timeTranscription profiling by array of Arabidopsis after infection with Phytophthera infestans
Adjusted p-valueLog2-fold change
1.5241 × 10-31.1
AT4G14365'pap1-D/tt4' vs 'wild type'genotypeTranscriptome analysis in flavonoid overaccumulating and lacking Arabidopsis.
Adjusted p-valueLog2-fold change
1.8942 × 10-31.1
AT4G14365'MYB12OX/tt4' vs 'wild type'genotypeTranscriptome analysis in flavonoid overaccumulating and lacking Arabidopsis.
Adjusted p-valueLog2-fold change
1.9345 × 10-31.1
AT4G14365'indole-3-acetic acid' vs 'none' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis mutant for nph4 or arf19 or both after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
2.323 × 10-31.1
AT4G14365'edr1 mutant' vs 'wild type' in 'Golovinomyces cichoracearum' at '36 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for edr1 after infection with Golovinomyces cichoracearum
Adjusted p-valueLog2-fold change
2.364 × 10-3-1.1
AT4G14365'LBD38 overexpression' vs 'wild type' in 'nitrogen depletion'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for or overexpressing LBD37 and LBD38 after nitrogen deprivation
Adjusted p-valueLog2-fold change
2.8462 × 10-3-1.1
AT4G14365'dexamethasone; 10 micromolar' vs 'none'compoundGenome-wide analysis of genes regulated by ARR22 overexpression.
Adjusted p-valueLog2-fold change
4.639 × 10-31.1
AT4G14365'abi4 vtc2' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for abi4 and/or vtc2
Adjusted p-valueLog2-fold change
4.8855 × 10-31.1
AT4G14365'Flg-22 1uM' vs 'water' at '1 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
6.114 × 10-31.1
AT4G14365'pft1 mutant' vs 'wild type' in 'control' at '0 hour'genotype, growth condition, timepft1 glucose responses
Adjusted p-valueLog2-fold change
6.1574 × 10-31.1
AT4G14365'ambient carbon dioxide 12h' vs 'ambient carbon dioxide 4h'growth condition, organism part, timeTranscription profiling by array of Arabidopsis grown in ambient or elevated carbon dioxide at low light levels
Adjusted p-valueLog2-fold change
6.8932 × 10-31.1
AT4G14365'spaceflight environment' vs 'ground control' in 'root'growth condition, organism partTranscription profiling by array of Arabidopsis whole plants and discrete root, hypocotyl and shoot responses to spaceflight
Adjusted p-valueLog2-fold change
7.4985 × 10-31.1
AT4G14365'pap1-D' vs 'wild type'genotypeTranscriptome analysis in flavonoid overaccumulating and lacking Arabidopsis.
Adjusted p-valueLog2-fold change
7.9542 × 10-31.1
AT4G14365'indole-3-acetic acid; 1 hour' vs 'indole-3-acetic acid; 0.5 hour' in 'C24'compound, ecotype, timeTranscription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
9.0677 × 10-31.1
AT4G14365'bhlh100/101 double mutant' vs 'wild type' in 'none; shoot'compound, genotype, organism partExpression data from Arabidopsis roots and shoots grown with or without iron
Adjusted p-valueLog2-fold change
1.07 × 10-2-1.1
AT4G14365'brm-1 ref6-1' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of BRAHMA (BRM) and H3K27 demethylase (REF6) mutants in Arabidopsis
Adjusted p-valueLog2-fold change
1.169 × 10-21.1
AT4G14365'far-red light pulse followed by darkness' vs 'constant white light' in 'leaf without petiole'growth condition, organism partTranscription profiling by array of Arabidopsis subjected to far-red light pulse treatment
Adjusted p-valueLog2-fold change
1.2011 × 10-21.1
AT4G14365'Pseudomonas syringae DC3000 COR- strain' vs 'mock' in 'wild type'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
1.3236 × 10-2-1.1
AT4G14365'ethanol; 2.5 percent' vs 'control' in 'wild type; 13 days in 12 h light/12 h dark (LD)'compound, genotype, growth conditionGene expression from Inducible TOC1 expression in Arabidopsis seedlings
Adjusted p-valueLog2-fold change
1.4928 × 10-2-1.1
AT4G14365'fpgs1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidiopsis inflorescence stems from fpgs1 mutants
Adjusted p-valueLog2-fold change
2.3151 × 10-2-1.1
AT4G14365'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
2.3405 × 10-2-1.1
AT4G14365'abscisic acids; 100 micromolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
2.7116 × 10-21.1
AT4G14365'100 micromolar; fenclorim' vs 'control' at '4 hour'compound, timeTranscription profiling by array of Arabidopsis treatment with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine
Adjusted p-valueLog2-fold change
2.7275 × 10-21.1
AT4G14365'tga2;tga5;tga6 mutant; none' vs 'Col-0; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for tga2, tga5 and tga6 after treatment with phytoprostane or 12-oxo-phytodienoic acid
Adjusted p-valueLog2-fold change
2.9172 × 10-21.1
AT4G14365'constant darkness' vs 'constant white light' in 'petiole'growth condition, organism partTranscription profiling by array of Arabidopsis subjected to far-red light pulse treatment
Adjusted p-valueLog2-fold change
3.3361 × 10-21.1
AT4G14365'16 hour (dark)' vs '0 hour (light)'growth condition, timeTranscription profiling of diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
Adjusted p-valueLog2-fold change
3.3367 × 10-21.1
AT4G14365'Phytophthora infestans' vs 'none' in 'erp2D mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
8.4514 × 10-171
AT4G14365'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.4381 × 10-101
AT4G14365'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'none'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
5.2207 × 10-51
AT4G14365'indole-3-acetic acid' vs 'none' in 'arf19-1'compound, genotypeTranscription profiling by array of Arabidopsis mutant for nph4 or arf19 or both after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
9.1413 × 10-5-1
AT4G14365'indole-3-acetic acid; 1 hour' vs 'indole-3-acetic acid; 0.5 hour' in 'Bay-0'compound, ecotype, timeTranscription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
9.2783 × 10-51
AT4G14365'phosphate-lacking medium' vs 'complete medium' in 'wild type'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
1.2518 × 10-41
AT4G14365'dicamba; 7 millimolar' vs 'none'compoundTranscription profiling by array of Arabidopsis after treatment with dicamba
Adjusted p-valueLog2-fold change
1.4833 × 10-41
AT4G14365'trasngenic REVOLUTA fused to GR domain' vs 'wild type genotype' in 'Collection day one' at '120 minute'block, genotype, timeExpression data from Arabidopsis GR-REVOLUTA and KANADI1-GR transgenic seedlings
Adjusted p-valueLog2-fold change
1.4835 × 10-4-1
AT4G14365'pBeaconRFP_GR::bZIP1; Treated with cycloheximide, 10 uM dexamethasone in ethanol, 20 mM KNO3 and 20 mM NH4NO3 solution' vs 'empty vector; Treated with cycloheximide, ethanol, 20 mM KNO3 and 20 mM NH4NO3 solution'genotype, treatmentHit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis
Adjusted p-valueLog2-fold change
1.837 × 10-41
AT4G14365'mbd4 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.0599 × 10-4-1
AT4G14365'3% glucose; 0.1% epibrassinolide' vs 'none'growth conditionGenome wide analysis of glucose brassinosteroid interaction in Arabidopsis
Adjusted p-valueLog2-fold change
6.7544 × 10-41
AT4G14365'letm1-2 homozygous, letm2-1 heterozygous double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis wild-type seedlings and either single or double knock-out mutants of LETM1 or LETM2
Adjusted p-valueLog2-fold change
8.6007 × 10-41
AT4G14365'indole-3-acetic acid; 5 micromolar' vs 'none' in 'stele'compound, organism partTranscription profiling by array of four distinct tissues of Arabidopsis root and whole root treated with (auxin) indole-3-acetic acid against mock-treated controls
Adjusted p-valueLog2-fold change
8.9769 × 10-41
AT4G14365'gun4-1 mutant' vs 'wild type' in 'no compound'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for gun4 or treated with gabaculin
Adjusted p-valueLog2-fold change
1.4279 × 10-3-1
AT4G14365'ethanol; 2.5 percent' vs 'control' in 'ethanol-inducible TOC1 transgenic line; 13 days in 12 h light/12 h dark (LD)'compound, genotype, growth conditionGene expression from Inducible TOC1 expression in Arabidopsis seedlings
Adjusted p-valueLog2-fold change
1.8272 × 10-31
AT4G14365'35S::HA::RAP2.12' vs 'wild type' in 'hypoxia'genotype, growth conditionTranscription profiling by array of Arabidopsis overexpressing RAP2.12 or with RAP2.12 and RAP2.2 silenced after growth in hypoxic conditions
Adjusted p-valueLog2-fold change
2.0168 × 10-31
AT4G14365'salicylic acid' vs 'control' in 'npr1 sni1 brca2a mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for npr1, sni1, ssn2 and/or brca2a after treatment with salicylic acid
Adjusted p-valueLog2-fold change
2.4483 × 10-31
AT4G14365'smg7-1 pad4-1 double mutant' vs 'pad4-1 mutant'genotypeTranscription profiling by high throughput sequencing of Arabidopsis smg7 pad4 double mutant
Adjusted p-valueLog2-fold change
2.8594 × 10-31
AT4G14365'Constans mutant' vs 'wild type'genotypeHAP5 Triple Mutant vs. Constans Mutant
Adjusted p-valueLog2-fold change
3.3363 × 10-31
AT4G14365'pmr6 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for pmr5 and/or pmr6
Adjusted p-valueLog2-fold change
4.1322 × 10-31
AT4G14365'ambient carbon dioxide 48h' vs 'ambient carbon dioxide 24h'growth condition, organism part, timeTranscription profiling by array of Arabidopsis grown in ambient or elevated carbon dioxide at low light levels
Adjusted p-valueLog2-fold change
6.1159 × 10-3-1
AT4G14365'myb21-5, myb24-5 double mutant' vs 'wild type' at 'flowering stage'developmental stage, genotypeTranscription profiling by array of Arabidopsis flowers from arf6-2, arf8-3 double mutant and myb21-5, myb24-5 double mutant
Adjusted p-valueLog2-fold change
7.0425 × 10-3-1
AT4G14365'beta-estradiol 5 micromolar' vs 'water' at 24hcompound, timeTranscription profiling by array of Arabidopsis with RNAi-mediated knockdown of RBR after treatment with beta estradiol
Adjusted p-valueLog2-fold change
9.1656 × 10-31
AT4G14365'Pseudomonas syringae DC3000' vs 'control' in '12 hour'age, growth conditionTranscription profiling by array of Arabidopsis after inoculation with Pseudomonas syringae
Adjusted p-valueLog2-fold change
9.2054 × 10-3-1
AT4G14365'wnk8-1 mutant' vs 'wild type'genotypeExpression data from 2-week-old Arabidopsis untreated seedlings grown under a short day condition
Adjusted p-valueLog2-fold change
9.5861 × 10-3-1
AT4G14365'pif1pif3pif4pif5 (pifq) mutant' vs 'wild type genotype'genotypeRNA-seq of coding RNA of Arabidopsis Phytochrome (phy)-Interacting bHLH Factor (PIF) mutants against wild-type controls to study target genes of PIF
Adjusted p-valueLog2-fold change
9.615 × 10-31
AT4G14365'HrpZ 10uM' vs 'water' at '1 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
1.2162 × 10-21
AT4G14365'1,4-dithiothreitol; 2 millimolar' vs 'none' in 'wild type genotype'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
1.3697 × 10-21
AT4G14365'long Poly(A)-tail; paps1-1' vs 'long Poly(A)-tail; wild type'RNA, genotypeGenome-wide analysis of PAPS1-dependent polyadenylation identifies novel roles for functionally specialized poly(A) polymerases in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.4722 × 10-21
AT4G14365'C3H14 overexpressor' vs 'wild type'genotypeExpression data from Arabidopsis C3H14/15 overexpressors, c3h14c3h15 double mutant vs wild type
Adjusted p-valueLog2-fold change
1.7221 × 10-21
AT4G14365'oas-a1.1' vs 'wild type' in 'CdCl2-treated shoot' at '24 hour'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis mutant for oas-a1 after treatment with cadmium chloride
Adjusted p-valueLog2-fold change
2.2549 × 10-21
AT4G14365'GO overexpression' vs 'wild type' in 'transferred to ambient CO2 concentration' at '8 hour'genotype, growth condition, timeTranscription profiling by array of Arabidopsis catalase mutant and plants expressing glycolate oxidase in chloroplasts transferred to ambient CO2 concentration
Adjusted p-valueLog2-fold change
2.3177 × 10-21
AT4G14365'gct-2' vs 'wild type'genotypeThe Arabidopsis Mediator CDK8 module genes CCT and GCT are global regulators of developmental phase transitions.
Adjusted p-valueLog2-fold change
2.6096 × 10-2-1
AT4G14365'48 hours' vs '45 hours'timeCPIB Lateral Root timecourse
Adjusted p-valueLog2-fold change
3.4849 × 10-2-1
AT4G14365'2 hour; excess light' vs '0 hour; low light' in 'tnr4 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light