AT4G16660

arabidopsis thaliana

heat shock protein 70 (Hsp 70) family protein

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Arabidopsis thaliana
Organism part
Showing 41 experiments:
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Created with Highcharts 6.2.0adult vascular leafcarpelcauline leafcotyledonflowerflower pedicelfruitfruit septumfruit valvehypocotylleafmixed shoot apical meristem, cotyledon and first leavespetalpetioleplant calluspollenrootroot tiprosette leafseedsepalsiliquestamenstem internodestem node
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
1.6762 × 10-117-4.5
AT4G16660'drought environment' vs 'normal watering' in 'wild type genotype'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.7961 × 10-64.2
AT4G16660'8h semi-in vivo pollen tube' vs '4h pollen tube'growth condition, timeTranscription profiling by array of Arabidopsis pollen and pollen tubes grown in vitro and in vivo
Adjusted p-valueLog2-fold change
1.8104 × 10-126-4
AT4G16660'drought environment' vs 'normal watering' in 'vtc2 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
00
Log2-fold change
3.5
AT4G16660'tunicamycin; 5 microgram per milliliter' vs 'none' in 'ire1b mutant'compound, genotypeExploring the link between ER stress and autophagy in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.9236 × 10-112-3.4
AT4G16660'drought environment' vs 'normal watering' in 'vtc2.5 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.2179 × 10-2863.3
AT4G16660'tunicamycin; 5 microgram per milliliter' vs 'none' in 'wild type genotype'compound, genotypeExploring the link between ER stress and autophagy in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.702 × 10-123.1
AT4G16660'30% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature'growth conditionTranscription profiling by array of Arabidopsis after growth at different temperatures
Adjusted p-valueLog2-fold change
7.6085 × 10-363
AT4G16660'1,4-dithiothreitol; 2 millimolar' vs 'none' in 'wild type genotype'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
8.0748 × 10-103
AT4G16660'COBL9::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
4.5796 × 10-93
AT4G16660'rhd6 WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
1.8675 × 10-932.9
AT4G16660'tunicamycin; 5 microgram per milliliter' vs 'none' in 'bzip17 -/- ; bzip28 -/-'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
3.7132 × 10-92.9
AT4G16660'WER::GFP' vs 'wild type genotype'genotypeDiversification of Root Hair Development Genes in Vascular Plants - arabidopsis thaliana dataset
Adjusted p-valueLog2-fold change
6.2815 × 10-82.9
AT4G16660'bzr1-1D;bri1-116 double mutant' vs 'bri1-116 null mutant'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
2.1882 × 10-62.9
AT4G16660'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
3.8098 × 10-252.8
AT4G16660'ANAC017 OEa' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
4.6212 × 10-212.8
AT4G16660'Ler/Kas-2 hybrid' vs 'Kas-2' in 'wild type genotype'ecotype, genotypeRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Adjusted p-valueLog2-fold change
8.4999 × 10-92.8
AT4G16660'20% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature'growth conditionTranscription profiling by array of Arabidopsis after growth at different temperatures
Adjusted p-valueLog2-fold change
1.0156 × 10-62.8
AT4G16660'bzr1-1D;bri1-116 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only
Adjusted p-valueLog2-fold change
5.0415 × 10-42.8
AT4G16660'transgenics over expressing LecRKVI.2 (OH1)' vs 'wild type'genotypeTranscriptome profiling of LecRKVI.2 over-expressor plants.
Adjusted p-valueLog2-fold change
1.485 × 10-1202.7
AT4G16660'tunicamycin; 5 microgram per milliliter' vs 'none' in 'ire1a; ire1b double mutant'compound, genotypeExploring the link between ER stress and autophagy in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.9271 × 10-29-2.7
AT4G16660'bzip28 -/-; bzip60 -/-' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
5.8119 × 10-242.7
AT4G16660'tunicamycin; 5 microgram per milliliter' vs 'none' in 'wild type genotype'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
6.0001 × 10-52.7
AT4G16660'3% glucose' at '4 hour' vs 'control' at '0 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid
Adjusted p-valueLog2-fold change
2.2235 × 10-122.6
AT4G16660'ANAC017 OEb' vs 'wild type genotype' at '3 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
7.3823 × 10-5-2.6
AT4G16660'agl15-4; agl18-1 double mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for agl15 and agl18 or overexpressing AGL15 during somatic embryogenesis
Adjusted p-valueLog2-fold change
2.1908 × 10-242.5
AT4G16660'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '3 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
5.5321 × 10-102.5
AT4G16660'excess light; none; 2 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
1.0413 × 10-4-2.5
AT4G16660'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '24 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
2.9829 × 10-3-2.5
AT4G16660'tor mutant' vs 'wild type' in 'glucose; 15 micromolar'compound, genotypeTranscription profiling by array of Arabidopsis estradiol inducible RNAi-tor seedlings treated with glucose
Adjusted p-valueLog2-fold change
4.6122 × 10-102.4
AT4G16660''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 6 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
7.276 × 10-92.4
AT4G16660''Pseudomonas syringae pv. maculicola carrying AvrRpt2; 10 hour' vs 'none; 0 hour' in 'wild type genotype'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
5.2405 × 10-72.4
AT4G16660'1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '3 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)
Adjusted p-valueLog2-fold change
3.2988 × 10-32.4
AT4G16660'mkk2 knockout; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'mkk2 knockout; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
7.1914 × 10-32.4
AT4G16660'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
6.7423 × 10-762.3
AT4G16660'wrky33 mutant; Botrytis cinerea 2100' vs 'wrky33 mutant; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
1.5311 × 10-272.3
AT4G16660'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '1 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
1.2331 × 10-72.3
AT4G16660'3% glucose; 0.1% epibrassinolide' vs 'none'growth conditionGenome wide analysis of glucose brassinosteroid interaction in Arabidopsis
Adjusted p-valueLog2-fold change
3.284 × 10-62.3
AT4G16660'2 hour; excess light' vs '0 hour; low light' in 'wild type'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
1.3377 × 10-52.3
AT4G16660'Sclerotinia sclerotiorum' vs 'none' in 'coi1-2 mutant' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
4.6037 × 10-32.3
AT4G16660'wild_type; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'wild_type; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
3.7211 × 10-8-2.2
AT4G16660'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '8 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
2.1251 × 10-72.2
AT4G16660'3 percent glucose' vs 'none'compoundTranscription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions
Adjusted p-valueLog2-fold change
4.819 × 10-52.2
AT4G16660'Plectosphaerella cucumerina inoculation' vs 'control' in 'agb1-1 mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina
Adjusted p-valueLog2-fold change
3.3343 × 10-42.2
AT4G16660'3% glucose' at '2 hour' vs 'control' at '0 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid
Adjusted p-valueLog2-fold change
3.8387 × 10-3-2.2
AT4G16660'rrd2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis temperature-dependent later root fasciation mutants
Adjusted p-valueLog2-fold change
1.1151 × 10-74-2.1
AT4G16660'wox5-1 mutant' vs 'wild type genotype' in 'wox5 GFP positive'genotype, phenotypeFrom gene networks to network motif dynamics: how the presense of positive feed-back and -forward loops between PERIANTHIA, WUSCHEL-RELATED HOMEOBOX5 and GRF-INTERACTING FACTOR 1 modulates gene expression and function in the Arabidopsis roots.
Adjusted p-valueLog2-fold change
2.0034 × 10-112.1
AT4G16660'warm/hot temperature regimen' vs 'none' in 'wild type genotype'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
5.4385 × 10-72.1
AT4G16660'wild type; Pseudomonas syringae pv. maculicola str. ES4326' vs 'wild type; mock'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis mutants in response to Pseudomonas syringae infection to study plant systemic acquired resistance
Adjusted p-valueLog2-fold change
5.0124 × 10-52.1
AT4G16660'Phytophthera infestans' vs 'none' at '6 hour'infect, timeTranscription profiling by array of Arabidopsis after infection with Phytophthera infestans
Adjusted p-valueLog2-fold change
3.11 × 10-32.1
AT4G16660'cabbage leaf curl virus infected' vs 'mock infected'infectTranscription profiling by array of Arabidopsis infected with geminivirus Cabbage leaf curl virus
Adjusted p-valueLog2-fold change
9.6565 × 10-32.1
AT4G16660'Pseudomonas syringae pv. Maculicola with effector AvrRpt2' at '6 hour' vs 'none'time, treatmentExpression profiling of Col-0 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
3.7762 × 10-2-2.1
AT4G16660'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
1.2041 × 10-27-2
AT4G16660'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.1419 × 10-21-2
AT4G16660'15 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
8.7201 × 10-4-2
AT4G16660'SWP73A overexpression' vs 'wild type genotype'genotypeMicroarray analysis of gene expression level in wild type and SWP73A overexpression Arabidopsis
Adjusted p-valueLog2-fold change
1.6186 × 10-381.9
AT4G16660'tunicamycin; 5 microgram per milliliter' vs 'none' in 's1p -/-; s2p -/-'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
3.889 × 10-281.9
AT4G16660'tunicamycin; 5 microgram per milliliter' vs 'none' in 'bzip17 -/- ; bzip60 -/-'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
2.8518 × 10-221.9
AT4G16660'ANAC017 OEb' vs 'wild type genotype' at '1 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
4.3403 × 10-21-1.9
AT4G16660'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
5.2082 × 10-71.9
AT4G16660'bri1-5 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids
Adjusted p-valueLog2-fold change
8.1825 × 10-71.9
AT4G16660'3 percent glucose and 1 micromolar indole-3-acetic acid' vs 'none'compoundTranscription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions
Adjusted p-valueLog2-fold change
5.4875 × 10-6-1.9
AT4G16660'antimycin A; 50 micromolar; anac017-1' vs 'water; anac017-1'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
3.4402 × 10-51.9
AT4G16660'Plectosphaerella cucumerina inoculation' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina
Adjusted p-valueLog2-fold change
4.9165 × 10-51.9
AT4G16660'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
9.5265 × 10-5-1.9
AT4G16660'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'spx1,spx2 double mutant'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
5.357 × 10-41.9
AT4G16660'powdery mildew infected' vs 'uninfected' in 'none' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
5.4871 × 10-41.9
AT4G16660'2 hour; excess light' vs '0 hour; low light' in 'tnr4 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
1.3596 × 10-31.9
AT4G16660'Erysiphe orontii' vs 'none' at '120 hour'infect, timeTranscription profiling by array of Arabidopsis after inoculation with Erysiphe orontii
Adjusted p-valueLog2-fold change
4.2916 × 10-31.9
AT4G16660'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '12 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
1.7433 × 10-151.8
AT4G16660'Blumeria graminis f. sp. hordei K1; avirulent; 18 hour' vs 'none; wild type phenotype; 18 hour'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
2.7273 × 10-6-1.8
AT4G16660'9 hr hypoxia' vs '9 hr control' in 'total mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
1.0791 × 10-5-1.8
AT4G16660'paclobutrazol; 20 micromolar' vs 'none' in 'embryo'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
1.667 × 10-51.8
AT4G16660'KZ-10 x Mrk-0' vs 'Mrk-0'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
3.1101 × 10-51.8
AT4G16660'1 micromolar salicylic acid at ZT24' vs 'water at ZT24' at '3 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)
Adjusted p-valueLog2-fold change
8.989 × 10-5-1.8
AT4G16660'antimycin A; 50 micromolar' vs 'water' in 'rao1-2 mutant'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
1.4908 × 10-41.8
AT4G16660'wild type; Golovinomyces orontii infection' vs 'wild type; no infection' at 7 daygenotype, infect, timeTranscription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii
Adjusted p-valueLog2-fold change
3.8034 × 10-41.8
AT4G16660'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 gpa1-4 double mutant; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
4.7743 × 10-41.8
AT4G16660'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
3.4276 × 10-21.8
AT4G16660'37 degrees celsius' vs '20 degrees celsius'compound, temperatureTranscription profiling by array of Arabidopsis after heat shock or treatment with tunicamycin or L-azetidine-2-carboxylic acid
Adjusted p-valueLog2-fold change
2.5792 × 10-561.7
AT4G16660'ozone; 350 nanoliter' vs 'none' in 'Cvi-0'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
1.3883 × 10-381.7
AT4G16660'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'none' at '0 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
8.6602 × 10-35-1.7
AT4G16660'sulki1-8 mutant' vs 'wild type genotype' in 'Ler/Kas-2 hybrid'ecotype, genotypeRNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
Adjusted p-valueLog2-fold change
3.0094 × 10-271.7
AT4G16660'ozone; 350 nanoliter' vs 'none' in 'Shahdara'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
6.2278 × 10-251.7
AT4G16660'Te; 350 ppb ozone exposure for 2hr' vs 'Te; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.0189 × 10-91.7
AT4G16660'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
6.8825 × 10-91.7
AT4G16660'ANAC017 OEa' vs 'wild type genotype' at '1 day'genotype, timeDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
Adjusted p-valueLog2-fold change
3.4137 × 10-71.7
AT4G16660'auxin' vs 'none' in '7 day'age, growth conditionTranscription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin
Adjusted p-valueLog2-fold change
5.2261 × 10-6-1.7
AT4G16660'abscisic acid; 20 micromolar' vs 'none' in 'embryo'compound, organism partTranscription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol
Adjusted p-valueLog2-fold change
1.08 × 10-51.7
AT4G16660'sucrose; 1 percent' vs 'none' in 'RBRcs mutant'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
4.2209 × 10-5-1.7
AT4G16660'low pH (pH 4.6)' vs 'standard pH (pH 5.7)' in 'root columella root cap'growth condition, organism partTranscription profiling by array of Arabidopsis root cells after growth in low pH conditions
Adjusted p-valueLog2-fold change
4.594 × 10-51.7
AT4G16660'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
1.8486 × 10-4-1.7
AT4G16660'antimycin A; 50 micromolar; rao2_EMS_mutant' vs 'water; rao2_EMS_mutant'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
3.2474 × 10-41.7
AT4G16660'csn4-1 mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
1.3913 × 10-31.7
AT4G16660'mkk1 knockout; benzo(1,2,3)thiadiazole-7-carbothioic acid S-methyl ester' vs 'mkk1 knockout; none'compound, genotypeTranscription profiling by array of Arabidopsis mutant for mkk1 and/or mkk2 after treatment with BTH
Adjusted p-valueLog2-fold change
6.8123 × 10-31.7
AT4G16660'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 mutant; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
1.1985 × 10-21.7
AT4G16660'wild type; Pseudomonas syringae pv. tomato DC3000' vs 'wild type; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
1.2393 × 10-21.7
AT4G16660'Erysiphe orontii' vs 'none' at '96 hour'infect, timeTranscription profiling by array of Arabidopsis after inoculation with Erysiphe orontii
Adjusted p-valueLog2-fold change
5.1213 × 10-391.6
AT4G16660'salicylic acid; 0.5 millimolar' vs 'none' in 'wild type genotype'compound, genotypeSalicylic acid-induced gene expression in wild-type Col-0 and mutant upl3-4 Arabidopsis thaliana plants.
Adjusted p-valueLog2-fold change
1.9495 × 10-191.6
AT4G16660'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '6 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
9.9128 × 10-151.6
AT4G16660'azetidine-2-carboxylic acid; 5 millimolar' vs 'none' in 'wild type genotype'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
1.1186 × 10-101.6
AT4G16660'elf18; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
9.5599 × 10-71.6
AT4G16660'auxin' vs 'none' in '35 day'age, growth conditionTranscription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin
Adjusted p-valueLog2-fold change
1.7976 × 10-6-1.6
AT4G16660'9 hr hypoxia' vs '9 hr control' in 'polysomal mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
1.0982 × 10-51.6
AT4G16660'seed germinating in continuous light 6 h SL' vs 'seed germinating in continuous light 1 h SL'growth conditionTranscription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination
Adjusted p-valueLog2-fold change
2.4392 × 10-51.6
AT4G16660'Blumeria graminis f.sp. hordei' vs 'none' in 'ataf1-1'genotype, infectTranscription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei
Adjusted p-valueLog2-fold change
4.2505 × 10-4-1.6
AT4G16660'antimycin A; 50 micromolar' vs 'water' in 'rao1-1 mutant'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
4.0778 × 10-2-1.6
AT4G16660'rps2 mutant' vs 'wild type genotype' in 'Pseudomonas syringae pv. maculicola carrying AvrRpt2' at '10 hour'genotype, infect, timeExpression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
Adjusted p-valueLog2-fold change
1.607 × 10-431.5
AT4G16660'350 ppb ozone exposure for 2hr' vs 'control' in 'tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
1.2178 × 10-361.5
AT4G16660'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky75 mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
8.5592 × 10-211.5
AT4G16660'CT101; 350 ppb ozone exposure for 2hr' vs 'CT101; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.4727 × 10-7-1.5
AT4G16660'efr-1; elf18' at '10 hour' vs 'wild type; elf18' at '10 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
2.2055 × 10-51.5
AT4G16660'0.5 hour; excess light' vs '0 hour; low light' in 'wild type'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
4.0213 × 10-5-1.5
AT4G16660'GID1b over expression in sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
1.0387 × 10-4-1.5
AT4G16660'antimycin A; 50 micromolar; wild type' vs 'water; wild type'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
1.5108 × 10-41.5
AT4G16660'12 hour (dark)' vs '0 hour (light)'growth condition, timeTranscription profiling of diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
Adjusted p-valueLog2-fold change
5.9004 × 10-31.5
AT4G16660'oligogalacturonide' vs 'water' at '3 hour'compound, timeTranscription profiling by array of Arabidopsis after treatment with oligogalacturonides
Adjusted p-valueLog2-fold change
2.3683 × 10-21.5
AT4G16660'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
2.5121 × 10-21.5
AT4G16660'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; guard cells'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
3.6959 × 10-721.4
AT4G16660'bli-1 -/-' vs 'wild type genotype'genotypeBLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.3441 × 10-431.4
AT4G16660'350 ppb ozone exposure for 2hr' vs 'none' in 'wrky25, wrky33 double mutant'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
4.2667 × 10-231.4
AT4G16660'warm/hot temperature regimen' vs 'none' in '35S:HSFA1b-RFP'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
4.1497 × 10-11-1.4
AT4G16660'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.17 × 10-7-1.4
AT4G16660'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day'genotype, timeTranscription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture.
Adjusted p-valueLog2-fold change
2.249 × 10-71.4
AT4G16660'estrogen induction' vs 'none' at '48 hour post induction' at 'age 7 day'age, time, treatmentTranscription profiling by array of Arabidopsis seedlings after estrogen-mediated induction of FAMA
Adjusted p-valueLog2-fold change
1.7377 × 10-61.4
AT4G16660'Bla-1 x Hh-0' vs 'Bla-1'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
5.1952 × 10-6-1.4
AT4G16660'sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
1.3075 × 10-51.4
AT4G16660'350 ppb ozone exposure for 2hr' vs 'control' in 'coi1-16 ein2 sid2'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
3.7762 × 10-5-1.4
AT4G16660'9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'total mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
4.9064 × 10-51.4
AT4G16660'abi3-6 mutant' vs 'wild type' in '16 day'age, genotypeGene regulation by the seed maturation master regulators, LEC1, LEC2, FUS3 and ABI3 [set 2]
Adjusted p-valueLog2-fold change
5.2524 × 10-5-1.4
AT4G16660'cycloheximide' vs 'control'treatmentTranscription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts
Adjusted p-valueLog2-fold change
7.995 × 10-51.4
AT4G16660'KZ-10 x Mrk-0' vs 'KZ-10'ecotypeTranscription profiling of Arabidopsis KZ-10/Mrk-0 hybrids and their parents
Adjusted p-valueLog2-fold change
3.5687 × 10-4-1.4
AT4G16660'Plasmodiophora brassicae' vs 'none' at '23 day'infect, timePlasmodiophora brassicae infection of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.9912 × 10-4-1.4
AT4G16660'low light; wild type' vs 'control; wild type'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
6.2182 × 10-4-1.4
AT4G16660'spx1,spx2 double mutant' vs 'wild type' in 'phosphate-lacking medium and resupplied with Pi for 4 h'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
9.3836 × 10-41.4
AT4G16660'MtNPF1.7 expression' vs 'wild type genotype' in '0.1 mM nitrate'genotype, growth conditionTranscriptional profiling of Arabidopsis constitutively expressing Medicago truncatula NRT1 PTR FAMILY 1.7
Adjusted p-valueLog2-fold change
1.7506 × 10-31.4
AT4G16660'total RNA; turnip mosaic virus inoculated' vs 'total RNA; mock'RNA, infectThe effect of TuMV on translation initiation in Arabidopsis
Adjusted p-valueLog2-fold change
3.4594 × 10-31.4
AT4G16660'powdery mildew infected' vs 'uninfected' in 'syringolin; 20 micromolar' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
4.7676 × 10-31.4
AT4G16660'ozone' vs 'control' in 'wild type' at '48 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis G-protein knockout plants in response to ozone
Adjusted p-valueLog2-fold change
1.1646 × 10-21.4
AT4G16660'oas-a1.1' vs 'wild type' in 'CdCl2-treated root' at '18 hour'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis mutant for oas-a1 after treatment with cadmium chloride
Adjusted p-valueLog2-fold change
1.568 × 10-21.4
AT4G16660'ceh1 mutant' vs 'wild type'genotypeTranscriptome of Arabidopsis thaliana ceh1 mutant
Adjusted p-valueLog2-fold change
1.8388 × 10-21.4
AT4G16660'salicylic acid' vs 'Silwet' at time: '4 hours' in ecotype: 'Col-0'growth condition, time, ecotypeTranscription profiling by array of seven ecotypes of Arabidopsis thaliana after time course treatment with salicylic acid.
Adjusted p-valueLog2-fold change
5.7961 × 10-701.3
AT4G16660'bli-1 -/-; ire1b -/-' vs 'wild type genotype'genotypeBLISTER safeguards the protein kinase activity of ER stress modulator IRE1A during plant growth and development in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.4961 × 10-291.3
AT4G16660'salt and heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
3.7505 × 10-27-1.3
AT4G16660'5 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
3.4452 × 10-161.3
AT4G16660'heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
1.9544 × 10-101.3
AT4G16660'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for tga2 tga5 tga6'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
1.1734 × 10-81.3
AT4G16660'Pseudomonas syringae DC3000 COR-deltahrpS strain' vs 'mock' in 'upf1-5 mutant'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
2.1672 × 10-81.3
AT4G16660'excess light; none; 0.5 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
6.3531 × 10-81.3
AT4G16660'Blumeria graminis f. sp. hordei A6; virulent; 18 hour' vs 'none; wild type phenotype; 18 hour'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
4.5304 × 10-71.3
AT4G16660'Mir-0 x Se-0' vs 'Se-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
1.0267 × 10-61.3
AT4G16660'siz1-3' vs 'wild type' in 'drought'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for siz1 after exposure to drought
Adjusted p-valueLog2-fold change
2.008 × 10-61.3
AT4G16660'Mir-0 x Se-0' vs 'Mir-0'ecotypeTranscription profiling of Arabidopsis Bla-1/Hh-0 hybrids, Mir-0/Se-0 hybrids and their corresponding parents
Adjusted p-valueLog2-fold change
4.3119 × 10-61.3
AT4G16660'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'mid rosette growth stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
7.8215 × 10-61.3
AT4G16660'csn3-1 mutant' vs 'wild type' in 'light'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions
Adjusted p-valueLog2-fold change
2.2958 × 10-51.3
AT4G16660'2 hour; excess light' vs '0 hour; low light' in 'hsfa1dhsfa2hsfa3 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
1.131 × 10-41.3
AT4G16660'Phytophthera infestans' vs 'none' at '24 hour'infect, timeTranscription profiling by array of Arabidopsis after infection with Phytophthera infestans
Adjusted p-valueLog2-fold change
1.406 × 10-4-1.3
AT4G16660'low light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
2.0023 × 10-4-1.3
AT4G16660'antimycin A; 50 micromolar' vs 'water' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
6.7476 × 10-4-1.3
AT4G16660'eds16 mutant; Golovinomyces orontii infection' vs 'wild type; Golovinomyces orontii infection' at 5 daygenotype, infect, timeTranscription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii
Adjusted p-valueLog2-fold change
1.1263 × 10-31.3
AT4G16660'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '24 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
6.1557 × 10-31.3
AT4G16660'polysomal RNA; turnip mosaic virus inoculated' vs 'polysomal RNA; mock'RNA, infectThe effect of TuMV on translation initiation in Arabidopsis
Adjusted p-valueLog2-fold change
7.6104 × 10-3-1.3
AT4G16660'mbd11 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.5755 × 10-31.3
AT4G16660'MgCl2' vs 'none' in 'ulp1c/ulp1d double mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
9.8882 × 10-31.3
AT4G16660'pBeaconRFP_IAA19mll overexpressor; none' vs 'pMON999_mRFP control vector; none'compound, genotypeTranscription profiling by array of Arabidopsis overexpressing IAA7mll or IAA19mll after treatment with indole-3-acetic acid
Adjusted p-valueLog2-fold change
1.9141 × 10-2-1.3
AT4G16660'ron2-1 knockout' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis ron2-1 knockout mutant
Adjusted p-valueLog2-fold change
2.9183 × 10-2-1.3
AT4G16660'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; root'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
3.0156 × 10-2-1.3
AT4G16660'2-(4-carboxyphenyl)-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide' vs 'none'compoundExpression data from Arabidopsis thaliana treated with NO donor SNP, compared to NO depletion by cPTIO
Adjusted p-valueLog2-fold change
8.5515 × 10-221.2
AT4G16660'wrky33 mutant; Botrytis cinerea 2100' vs 'wild type; Botrytis cinerea 2100'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
4.5357 × 10-171.2
AT4G16660'Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day'growth condition, infect, sampling time pointLeaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
Adjusted p-valueLog2-fold change
2.4988 × 10-151.2
AT4G16660'wild type; Botrytis cinerea 2100' vs 'wild type; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
4.1452 × 10-141.2
AT4G16660'10 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
1.3074 × 10-111.2
AT4G16660'350 ppb ozone exposure for 2hr' vs 'none' in 'wild type'environmental stress, genotypeTranscription profiling by high throughput sequencing of Arabidopsis wrky75 mutant and wrky25, wrky33 double mutant in response to ozone treatment
Adjusted p-valueLog2-fold change
4.6451 × 10-91.2
AT4G16660'57 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
4.061 × 10-81.2
AT4G16660'vtc1' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for vtc1 or abi4
Adjusted p-valueLog2-fold change
1.5008 × 10-71.2
AT4G16660'benzothiadiazole' vs 'control'growth conditionTranscription profiling by array of Arabidopsis overexpressing mil4 after treatment with benzothiadiazole
Adjusted p-valueLog2-fold change
1.5739 × 10-61.2
AT4G16660'350 ppb ozone exposure for 2hr' vs 'control' in 'Col-0 control genotype for coi1-16 ein2 sid2'genotype, growth conditionRNA-seq of two arabidopsis triple mutants coi1-16 ein2 sid2 and tga2 tga5 tga6 related to Jasmonic acid, salicylic acid and ethylene signaling under ozone treatment to identify hormone-independant apoplastic reactive oxygen species (ROS) signaling
Adjusted p-valueLog2-fold change
1.5739 × 10-61.2
AT4G16660'Col-0; 350 ppb ozone exposure for 2hr' vs 'Col-0; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.1006 × 10-61.2
AT4G16660'Blumeria graminis f.sp. hordei' vs 'none' in 'wild type'genotype, infectTranscription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei
Adjusted p-valueLog2-fold change
2.2339 × 10-61.2
AT4G16660'C24; 350 ppb ozone exposure for 2hr' vs 'C24; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.3995 × 10-61.2
AT4G16660'powdery mildew' vs 'none' in 'wild type genotype'genotype, infectTranscription profiling of Arabidopsis callose synthase deficient (pmr4-1) mutant and wild type plants infected with powdery mildew
Adjusted p-valueLog2-fold change
1.1441 × 10-51.2
AT4G16660'dicamba; 7 millimolar' vs 'none'compoundTranscription profiling by array of Arabidopsis after treatment with dicamba
Adjusted p-valueLog2-fold change
2.7323 × 10-5-1.2
AT4G16660'9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'polysomal mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
3.162 × 10-51.2
AT4G16660'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-2 mutant'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
3.3589 × 10-51.2
AT4G16660'abi4 vtc2' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for abi4 and/or vtc2
Adjusted p-valueLog2-fold change
1.1162 × 10-41.2
AT4G16660'Piereis brassicae; larval feeding' vs 'none; none' in 'whole plant flowering stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
1.1385 × 10-31.2
AT4G16660'GST-NPP1 1uM' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
1.3904 × 10-3-1.2
AT4G16660'480 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
5.6276 × 10-31.2
AT4G16660'35S::ERF104; flg22' vs '35S::ERF104; none'compound, genotypeTranscription profiling by array of Arabidopsis expressing ERF104 under the control of the 35S promoter, mutant for erf104 or mpk6
Adjusted p-valueLog2-fold change
9.8223 × 10-31.2
AT4G16660'5-aza-2-deoxycytidine 20 milligram per liter' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ddm1
Adjusted p-valueLog2-fold change
1.2131 × 10-21.2
AT4G16660'ozone' vs 'control' in 'G-protein knockout mutant' at '48 hour'environmental stress, genotype, timeTranscription profiling by array of Arabidopsis G-protein knockout plants in response to ozone
Adjusted p-valueLog2-fold change
1.8029 × 10-2-1.2
AT4G16660'drought; abi1td' at '0 hour' vs 'control; abi1td' at '0 hour'environmental stress, genotype, timeTranscription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling
Adjusted p-valueLog2-fold change
2.0536 × 10-21.2
AT4G16660'2 day; naphthaleneacetic acid' vs '0 day; no treatment' in 'stem tissue'growth condition, organism part, timeTranscription profiling by array of Arabidopsis stem tissues after treatment with naphthaleneacetic acid
Adjusted p-valueLog2-fold change
2.3807 × 10-2-1.2
AT4G16660'AGL15 overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for agl15 and agl18 or overexpressing AGL15 during somatic embryogenesis
Adjusted p-valueLog2-fold change
3.29 × 10-2-1.2
AT4G16660'sodium nitroprusside' vs 'none'compoundExpression data from Arabidopsis thaliana treated with NO donor SNP, compared to NO depletion by cPTIO
Adjusted p-valueLog2-fold change
3.5913 × 10-21.2
AT4G16660'Botrytis cinerea' vs 'none' at '48 hour'infect, timeTranscription profiling by array of Arabidopsis after infection with Botrytis cinerea
Adjusted p-valueLog2-fold change
4.6648 × 10-21.2
AT4G16660'pvip1; pvip2 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for pvip1 and pvip2
Adjusted p-valueLog2-fold change
2.3518 × 10-91.1
AT4G16660'Sphingomonas melonis Fr1 colonization; Pseudomonas syringae DC3000' vs 'axenic plant' at '7 day'growth condition, infect, sampling time pointLeaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
Adjusted p-valueLog2-fold change
2.4762 × 10-6-1.1
AT4G16660'rlt1-1 rlt2-1 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis rlt1-1 rlt2-1 mutants
Adjusted p-valueLog2-fold change
2.0652 × 10-5-1.1
AT4G16660'microRNA targeting Umkirch-3 allele of At5g41750' vs 'control'genotypeTranscription profiling of Arabidopsis Umkirch-1/Umkirch-3 hybrid plants compared to siblings carrying a microRNA targeting the Umkirch-3 allele of At5g41750
Adjusted p-valueLog2-fold change
3.3954 × 10-51.1
AT4G16660'vtc2' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis mutant for abi4 and/or vtc2
Adjusted p-valueLog2-fold change
3.4725 × 10-51.1
AT4G16660'Pep1; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.8718 × 10-5-1.1
AT4G16660'inducible 35S:LOB-GR line' vs 'wild type' in 'dexamethasone; 5 micromolar'compound, genotypeTranscriptome analysis of genes regulated by overexpression of LATERAL ORGAN BOUNDARIES (LOB) in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.3011 × 10-51.1
AT4G16660'salicylic acid' vs 'none' in 'sdh1 mutant'compound, genotypeTranscription profiling by array of Arabidopsis mutant for sdh1 after treatment with salicylic acid
Adjusted p-valueLog2-fold change
1.2497 × 10-4-1.1
AT4G16660'NaCl' vs 'control' in 'epidermal and lateral root cap cells'cell type, growth conditionTranscription profiling by array of Arabidopsis root cells after treatment with NaCl
Adjusted p-valueLog2-fold change
1.3031 × 10-41.1
AT4G16660'siz1-3' vs 'wild type' in 'control'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for siz1 after exposure to drought
Adjusted p-valueLog2-fold change
2.2417 × 10-41.1
AT4G16660'MYB96 overexpression' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis overexpressing MYB96 or myb96 knock out mutants
Adjusted p-valueLog2-fold change
2.2626 × 10-41.1
AT4G16660'Piereis brassicae; eggs and larval feeding' vs 'none; none' in 'whole plant flowering stage; leaf'developmental stage, infect, organism part, stimulusRNA-Seq of Arabidopsis thaliana plants primed by insect eggs from Pieris brassicae and triggered by insect herbivory against untreated controls in two different developmental phases (vegetative vs. reproductive)
Adjusted p-valueLog2-fold change
1.8201 × 10-3-1.1
AT4G16660'dexamethasone and cycloheximide' vs 'control'treatmentTranscription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts
Adjusted p-valueLog2-fold change
4.3859 × 10-31.1
AT4G16660'5 day; naphthaleneacetic acid' vs '2 day; naphthaleneacetic acid' in 'stem tissue'growth condition, organism part, timeTranscription profiling by array of Arabidopsis stem tissues after treatment with naphthaleneacetic acid
Adjusted p-valueLog2-fold change
1.0613 × 10-2-1.1
AT4G16660'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.389 × 10-21.1
AT4G16660'tcx2; CYCD6:GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
1.7589 × 10-2-1.1
AT4G16660'drought; wild type' at '0 hour' vs 'control; wild type' at '0 hour'environmental stress, genotype, timeTranscription profiling of Arabidopsis wild type and abi1td mutant plants stressed by ozone or drought to better understand ABA signalling
Adjusted p-valueLog2-fold change
1.8784 × 10-21.1
AT4G16660'Pseudomonas syringae pv. tomato' vs 'none' in 'ulp1c/ulp1d double mutant'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ulp1c and ulp1d after inoculation with Pseudomonas syringae pv. tomato expressing mutant HopZ1a
Adjusted p-valueLog2-fold change
1.9331 × 10-21.1
AT4G16660'Turnip mosaic virus' vs 'mock' in 'zone 0'infect, sampling siteTranscription profiling by of Arabidopsis leaves after infection with Potyvirus turnip mosaic virus
Adjusted p-valueLog2-fold change
2.1625 × 10-21.1
AT4G16660'Pseudomonas syringae DC3000hrpA' vs 'control' in '4 hour'age, growth conditionTranscription profiling by array of Arabidopsis after inoculation with Pseudomonas syringae
Adjusted p-valueLog2-fold change
4.6575 × 10-2-1.1
AT4G16660'pad4 mutant' vs 'wild type' in 'Pseudomonas syringae ES4326'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for sid2, pad4, pad2, nor1, ein2 or coi1 after infection with Pseudomonas syringae ES4326
Adjusted p-valueLog2-fold change
4.336 × 10-16-1
AT4G16660'fmo1 mutant' vs 'wild type genotype' in 'pipecolic acid; 10 micromolar'block, compound, genotypeTranscriptional response of Arabidopsis thaliana to exogenous application of pipecolic acid
Adjusted p-valueLog2-fold change
2.3388 × 10-131
AT4G16660'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
3.5577 × 10-91
AT4G16660'42 day' vs '29 day'ageRNA-seq of Arabidopsis rosette leaves at four time points (29, 35, 42, and 57 day) during developmental senescence
Adjusted p-valueLog2-fold change
4.4682 × 10-61
AT4G16660'60 minutes after cordycepin treatment' vs 'immediately after cordycepin treatment' in 'wild type genotype'genotype, sampling time pointTranscription profiling by array of a stably RNAi-silenced nuclear 5’-3’ exonuclease XRN3 mutant line in Arabidopsis thaliana after transcriptional inhibition with cordycepin
Adjusted p-valueLog2-fold change
9.9951 × 10-61
AT4G16660'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wrky72-1 mutant'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
2.7156 × 10-51
AT4G16660'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wild type'genotype, infectTranscription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2
Adjusted p-valueLog2-fold change
3.3282 × 10-5-1
AT4G16660'cycloheximide (60 micromolar) and dexamethasone (60 micromolar)' vs 'dimethyl sulfoxide; 60 micromolar'compoundTranscription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes
Adjusted p-valueLog2-fold change
2.8729 × 10-41
AT4G16660'8 hour (light)' vs '0 hour (light)'growth condition, timeTranscription profiling of diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
Adjusted p-valueLog2-fold change
3.0067 × 10-41
AT4G16660'4 hour (light)' vs '0 hour (light)'growth condition, timeTranscription profiling of diurnal gene expression in Arabidopsis thaliana Col-0 rosette leaves
Adjusted p-valueLog2-fold change
5.0757 × 10-41
AT4G16660'salicylic acid' vs 'none' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis mutant for sdh1 after treatment with salicylic acid
Adjusted p-valueLog2-fold change
9.3469 × 10-41
AT4G16660'AFB1 overexpression; Pseudomonas syringae pv. tomato DC3000' vs 'AFB1 overexpression; none'genotype, infectTranscription profiling by array of Arabidopsis overexpressing miR393 or AFB1 under the control of the 35S promoter after infection with Pseudomonas syringae pv. tomato DC3000
Adjusted p-valueLog2-fold change
1.0198 × 10-31
AT4G16660'Pseudomonas syringae DC3000 COR-deltahrpS strain' vs 'mock' in 'wild type'genotype, infectTranscription profiling by high throughput sequencing of Arabidopsis upf1-5 mutant challenged with pathogenic or non-pathogenic Pseudomonas syringae DC3000 strains
Adjusted p-valueLog2-fold change
1.076 × 10-3-1
AT4G16660'dexamethasone; 5 micromolar' vs 'none' in 'inducible 35S:LOB-GR line'compound, genotypeTranscriptome analysis of genes regulated by overexpression of LATERAL ORGAN BOUNDARIES (LOB) in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.2393 × 10-3-1
AT4G16660'0.1 mM nitrate' vs '10 mM nitrate' in 'wild type genotype'genotype, growth conditionTranscriptional profiling of Arabidopsis constitutively expressing Medicago truncatula NRT1 PTR FAMILY 1.7
Adjusted p-valueLog2-fold change
1.632 × 10-31
AT4G16660'Phytophthora infestans' vs 'none' in 'wild type' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
1.8173 × 10-31
AT4G16660'pao-1 mutant' vs 'wild type genotype' in 'continuous dark (no light) regimen' at '2 day'environmental stress, genotype, timeTranscriptome profiling of Arabidopsis mutants of the chlorophyll degradation PAO/Phyllobilin pathway
Adjusted p-valueLog2-fold change
2.5106 × 10-31
AT4G16660'eds16 mutant; Golovinomyces orontii infection' vs 'eds16 mutant; no infection' at 7 daygenotype, infect, timeTranscription profiling by array of Arabidopsis mutant for eds16 after infection with Golovinomyces orontii
Adjusted p-valueLog2-fold change
4.7838 × 10-31
AT4G16660'Flg-22 1uM' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
5.2024 × 10-31
AT4G16660'HrpZ 10uM' vs 'water' at '4 hour'growth condition, timeTranscription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1
Adjusted p-valueLog2-fold change
8.2392 × 10-31
AT4G16660'Heterodera schachtii' vs 'none'infectTranscription profiling by array of Arabidopsis roots infected with the cyst nematode H. schachtii
Adjusted p-valueLog2-fold change
1.0449 × 10-21
AT4G16660'2,6-dichloroisonicotinic acid' vs 'none' in 'wild type' at '2 day'compound, genotype, timeTranscription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid
Adjusted p-valueLog2-fold change
1.1664 × 10-21
AT4G16660'defense signaling mutant ndr1-1; Verticillium longisporum isolate VL1 (CBS110220)' vs 'defense signaling mutant ndr1-1; mock'genotype, infectExpression data roots of Arabidopsis plants inoculated with Verticillium longisporum
Adjusted p-valueLog2-fold change
2.5648 × 10-21
AT4G16660'dcl1-15 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis wild-type and dcl1-15 torpedo-staged embryos
Adjusted p-valueLog2-fold change
2.8581 × 10-21
AT4G16660'Pseudomonas syringae DC3000' vs 'control' in '4 hour'age, growth conditionTranscription profiling by array of Arabidopsis after inoculation with Pseudomonas syringae