AT5G03720 (HSFA3)

arabidopsis thaliana

HSFA3

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Arabidopsis thaliana
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Showing 35 experiments:
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
4.3713 × 10-145.9
AT5G03720'tcx2; TMO5:3xGFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
6.7158 × 10-85.3
AT5G03720'tcx2; FEZ:FEZ-GFP' vs 'wild type genotype'genotypeTranscriptional profile of TCX2 mutant
Adjusted p-valueLog2-fold change
1.1832 × 10-75
AT5G03720'2 hour; excess light' vs '0 hour; low light' in 'wild type'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
1.0779 × 10-54.8
AT5G03720'2 hour; excess light' vs '0 hour; low light' in 'tnr4 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
3.4734 × 10-114.4
AT5G03720'excess light; none; 2 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
1.1129 × 10-144.2
AT5G03720'wox5-1 mutant' vs 'wild type genotype' in 'wox5 GFP positive'genotype, phenotypeFrom gene networks to network motif dynamics: how the presense of positive feed-back and -forward loops between PERIANTHIA, WUSCHEL-RELATED HOMEOBOX5 and GRF-INTERACTING FACTOR 1 modulates gene expression and function in the Arabidopsis roots.
Adjusted p-valueLog2-fold change
4.0237 × 10-8-4.2
AT5G03720'drought environment' vs 'normal watering' in 'vtc2 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
8.2534 × 10-134.1
AT5G03720'warm/hot temperature regimen' vs 'none' in 'wild type genotype'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
1.8693 × 10-54.1
AT5G03720'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '3 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
1.4783 × 10-373.9
AT5G03720'Sei-0 x Col F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
1.3836 × 10-233.8
AT5G03720'Sei-0 x Col-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '2 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
3.9179 × 10-53.8
AT5G03720'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'wild type' at '3 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
4.2043 × 10-53.6
AT5G03720'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '6 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
9.8409 × 10-6-3.5
AT5G03720'10 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
1.6377 × 10-4-3.5
AT5G03720'12 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
1.4709 × 10-133.4
AT5G03720'mechanical stimulus - water from spray bottle; 25 minute' vs 'none; 0 minute' in 'myc324'genotype, stimulus, timeRNAseq analysis of early touch responses in myc234 mutants in Arabidopsis
Adjusted p-valueLog2-fold change
2.0783 × 10-283.3
AT5G03720'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
1.1222 × 10-173.3
AT5G03720'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '2 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.6329 × 10-73.3
AT5G03720'cycloheximide' vs 'dimethyl sulfoxide' in '60 micromolar'compoundTranscription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes
Adjusted p-valueLog2-fold change
5.6152 × 10-193.2
AT5G03720'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'none' at '0 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
8.3383 × 10-153.2
AT5G03720'mechanical stimulus - water from spray bottle; 25 minute' vs 'none; 0 minute' in 'wild type genotype'genotype, stimulus, timeRNAseq analysis of early touch responses in myc234 mutants in Arabidopsis
Adjusted p-valueLog2-fold change
1.3631 × 10-83.2
AT5G03720'cycloheximide (60 micromolar) and dexamethasone (60 micromolar)' vs 'dimethyl sulfoxide; 60 micromolar'compoundTranscription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes
Adjusted p-valueLog2-fold change
2.8333 × 10-53.2
AT5G03720'0.5 hour; excess light' vs '0 hour; low light' in 'wild type'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
1.5713 × 10-23.2
AT5G03720'37 degrees celsius' vs '20 degrees celsius'compound, temperatureTranscription profiling by array of Arabidopsis after heat shock or treatment with tunicamycin or L-azetidine-2-carboxylic acid
Adjusted p-valueLog2-fold change
2.7166 × 10-133.1
AT5G03720'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '3 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
2.014 × 10-7-3.1
AT5G03720'drought environment' vs 'normal watering' in 'wild type genotype'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.7662 × 10-3-3.1
AT5G03720'15 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
2.2393 × 10-103
AT5G03720'30% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature'growth conditionTranscription profiling by array of Arabidopsis after growth at different temperatures
Adjusted p-valueLog2-fold change
8.637 × 10-83
AT5G03720'ire1a/ire1b' vs 'wild type' in 'tunicamycin 5 milligram per liter'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ire1 after treatment with tunicamycin
Adjusted p-valueLog2-fold change
5.4551 × 10-4-3
AT5G03720'13 day' vs '7 day' in 'wild type'genotype, sampling time pointTranscription profiling by high throughput sequencing of Arabidopsis developing wild type and val1 embryos
Adjusted p-valueLog2-fold change
2.4014 × 10-22.9
AT5G03720'24 hour' vs '12 hour' in 'Blumeria graminis f. sp. hordei A6; virulent'infect, phenotype, timeTime course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
Adjusted p-valueLog2-fold change
1.5906 × 10-142.8
AT5G03720'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '6 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
1.1547 × 10-72.8
AT5G03720'abscisic acids; 50 micromolar' vs 'none' in 'wild type genotype'compound, genotypeAn Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress
Adjusted p-valueLog2-fold change
9.7858 × 10-482.7
AT5G03720'heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
3.6843 × 10-26-2.7
AT5G03720'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
8.4888 × 10-182.7
AT5G03720'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'abscisic acids; 100 micromolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
1.6071 × 10-52.7
AT5G03720'antimycin A; 50 micromolar' vs 'water' in 'rao1-2 mutant'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
4.3868 × 10-42.7
AT5G03720'0.5 hour; excess light' vs '0 hour; low light' in 'tnr4 mutant'genotype, growth condition, timeTranscription profiling by array of Arabidopsis after exposure to excess light
Adjusted p-valueLog2-fold change
1.2285 × 10-24-2.6
AT5G03720'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
5.3894 × 10-352.5
AT5G03720'salt and heat stress' vs 'none'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
Adjusted p-valueLog2-fold change
4.0471 × 10-252.5
AT5G03720'pdx3-4 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis pdx3 mutant plants
Adjusted p-valueLog2-fold change
3.7347 × 10-92.5
AT5G03720'gamma-butyrolactone; 25 micromolar' vs 'DMSO' in 'wounding' at '1 hour'compound, injury, timeThe effect of γ-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
Adjusted p-valueLog2-fold change
5.2727 × 10-19-2.4
AT5G03720'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.2557 × 10-102.3
AT5G03720'excess light; none; 0.5 hour' vs 'low light; none; 0 hour'compound, growth condition, timeTranscription profiling by array of Arabidopsis leaves exposed to excess light and DBMIB
Adjusted p-valueLog2-fold change
1.5729 × 10-92.3
AT5G03720'20% inhibition from optimum photosynthesis temperature' vs 'baseline growth temperature'growth conditionTranscription profiling by array of Arabidopsis after growth at different temperatures
Adjusted p-valueLog2-fold change
1.1496 × 10-7-2.3
AT5G03720'3 percent glucose and 1 micromolar indole-3-acetic acid' vs 'none'compoundTranscription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions
Adjusted p-valueLog2-fold change
2.9287 × 10-72.3
AT5G03720'9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'total mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
6.5525 × 10-72.3
AT5G03720'abscisic acids; 50 micromolar' vs 'none' in 'nup85 loss of function mutant'compound, genotypeAn Arabidopsis Nucleoporin NUP85 modulates plant responses to ABA and salt stress
Adjusted p-valueLog2-fold change
1.0832 × 10-6-2.3
AT5G03720'3% glucose; 0.1% epibrassinolide' vs 'none'growth conditionGenome wide analysis of glucose brassinosteroid interaction in Arabidopsis
Adjusted p-valueLog2-fold change
1.3776 × 10-52.3
AT5G03720'antimycin A; 50 micromolar' vs 'water' in 'wild type'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
2.7416 × 10-11-2.2
AT5G03720'abscisic acids; 100 micromolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
8.4244 × 10-8-2.2
AT5G03720'3 percent glucose' vs 'none'compoundTranscription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions
Adjusted p-valueLog2-fold change
8.8136 × 10-72.2
AT5G03720'antimycin A; 50 micromolar; anac017-1' vs 'water; anac017-1'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
1.4259 × 10-62.2
AT5G03720'9 hr hypoxia' vs '9 hr control' in 'polysomal mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
2.7612 × 10-6-2.2
AT5G03720'35S:HSFA1b-RFP' vs 'wild type genotype' in 'warm/hot temperature regimen'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
4.6306 × 10-62.2
AT5G03720'CL37' vs 'fae1 mutant' in '11 to 12 DPA'developmental stage, genotypeRNASeq of Developing Arabidopsis Seeds Producing Hydroxy-Fatty Acids
Adjusted p-valueLog2-fold change
9.7627 × 10-352.1
AT5G03720'mechanical stimulation' at '25 minute' vs 'none'stimulus, timeRNAseq on touch-treated Arabidopsis thaliana plants
Adjusted p-valueLog2-fold change
2.1442 × 10-11-2.1
AT5G03720'mannitol; 300 millimolar' vs 'none' in 'wild type genotype'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
8.6052 × 10-112.1
AT5G03720'pdx3-3 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis pdx3 mutant plants
Adjusted p-valueLog2-fold change
2.6978 × 10-72.1
AT5G03720'9 hr hypoxia' vs '9 hr control' in 'total mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
2.3794 × 10-32.1
AT5G03720'Meloidogyne incognita infested region' vs 'Meloidogyne incognita non-infested region' at '14 day'sampling site, timeTranscription profiling by array of Arabidopsis root cells infested with Meloidogyne incognita 14 or 21 days after inoculation
Adjusted p-valueLog2-fold change
1.2615 × 10-20-2
AT5G03720'rlp23-1' vs 'wild type genotype' in 'nlp20; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.6633 × 10-62
AT5G03720'9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'polysomal mRNA'RNA, growth conditionTranscription profiling by array of Arabidopsis after short and prolonged hypoxia treatment
Adjusted p-valueLog2-fold change
2.5984 × 10-52
AT5G03720'antimycin A; 50 micromolar; rao2_EMS_mutant' vs 'water; rao2_EMS_mutant'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
6.6823 × 10-42
AT5G03720'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'wild type' at '1 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
7.0452 × 10-22-1.9
AT5G03720'24 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.38 × 10-20-1.9
AT5G03720'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.0396 × 10-91.9
AT5G03720'drought' vs 'control' in 'camta1-3 mutant; root'genotype, growth condition, organism partRole of CAMTA1 gene under drought stress
Adjusted p-valueLog2-fold change
6.9673 × 10-51.9
AT5G03720'NaCl' vs 'control' in 'epidermal and lateral root cap cells'cell type, growth conditionTranscription profiling by array of Arabidopsis root cells after treatment with NaCl
Adjusted p-valueLog2-fold change
5.9085 × 10-31.9
AT5G03720'sodium chloride; 150 millimolar' vs 'control; 0 millimolar' in 'bzip1, bzip53 double knockout' at '1 hour'compound, genotype, timeTranscription profiling by array of Arabidopsis roots treated with salt from bzip1, bzip53 double knockout
Adjusted p-valueLog2-fold change
1.4326 × 10-21.9
AT5G03720'NaCl' vs 'control' in 'stele cells'cell type, growth conditionTranscription profiling by array of Arabidopsis root cells after treatment with NaCl
Adjusted p-valueLog2-fold change
1.6163 × 10-21.9
AT5G03720'NaCl' vs 'control' in 'endodermal and quiescent center cells'cell type, growth conditionTranscription profiling by array of Arabidopsis root cells after treatment with NaCl
Adjusted p-valueLog2-fold change
1.2505 × 10-301.8
AT5G03720'mechanical stimulation' at '40 minute' vs 'none'stimulus, timeRNAseq on touch-treated Arabidopsis thaliana plants
Adjusted p-valueLog2-fold change
9.9104 × 10-51.8
AT5G03720'15 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
5.8339 × 10-31.8
AT5G03720'Meloidogyne incognita infested region' vs 'Meloidogyne incognita non-infested region' at '21 day'sampling site, timeTranscription profiling by array of Arabidopsis root cells infested with Meloidogyne incognita 14 or 21 days after inoculation
Adjusted p-valueLog2-fold change
8.3267 × 10-241.7
AT5G03720'tunicamycin; 5 microgram per milliliter' vs 'none' in 'ire1b mutant'compound, genotypeExploring the link between ER stress and autophagy in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.1057 × 10-141.7
AT5G03720'flg22' vs 'none'stimulusRNA-seq of Arabidopsis thaliana seedlings treated with Flg22 or Pep1
Adjusted p-valueLog2-fold change
9.1197 × 10-14-1.7
AT5G03720'7 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
3.7364 × 10-11-1.7
AT5G03720'5 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
2.3192 × 10-10-1.7
AT5G03720'14 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
8.3216 × 10-5-1.7
AT5G03720'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '2 hour'phenotype, timeTranscription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response
Adjusted p-valueLog2-fold change
1.1312 × 10-4-1.7
AT5G03720'powdery mildew infected' vs 'uninfected' in 'syringolin; 20 micromolar' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
4.922 × 10-41.7
AT5G03720'phr1; phl1 double mutant' vs 'wild type genotype' in 'phosphate deprivation; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
8.4226 × 10-41.7
AT5G03720'antimycin A; 50 micromolar' vs 'water' in 'rao1-1 mutant'compound, genotypeTranscription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A
Adjusted p-valueLog2-fold change
8.8651 × 10-41.7
AT5G03720'antimycin A; 50 micromolar; wild type' vs 'water; wild type'compound, genotypeTranscription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals
Adjusted p-valueLog2-fold change
9.9769 × 10-4-1.7
AT5G03720'apl mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis phloem from Altered Phloem Development (APL) mutants and wild type controls
Adjusted p-valueLog2-fold change
1.4134 × 10-321.6
AT5G03720'det1-1 mutant' vs 'wild type' in 'continuous dark (no light) regimen'genotype, growth conditionTranscription profiling by high throughput sequencing of Arabidopsis wild type, det1-1 mutant, and pif quadruple mutant seedlings grown in the dark and of wild type seedlings exposed to white light for 6 hours
Adjusted p-valueLog2-fold change
3.4159 × 10-14-1.6
AT5G03720'lyk4/5' vs 'wild type genotype' in 'CO8; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.9975 × 10-12-1.6
AT5G03720'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant; Blumeria graminis f. sp. hordei K1; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
4.1125 × 10-11-1.6
AT5G03720'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei A6; virulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.8076 × 10-10-1.6
AT5G03720'4 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
4.1824 × 10-6-1.6
AT5G03720'wrky33 mutant; Botrytis cinerea 2100' vs 'wrky33 mutant; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
5.441 × 10-6-1.6
AT5G03720'abscisic acid; 0.1 millimolar' vs 'none' in 'rbm25-1 mutant'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
3.2626 × 10-51.6
AT5G03720'30 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
2.534 × 10-4-1.6
AT5G03720'low water potential stress' vs 'control' in 'wild type'genotype, growth conditionComparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant
Adjusted p-valueLog2-fold change
9.569 × 10-41.6
AT5G03720'Sei-0 x Col-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
2.1446 × 10-3-1.6
AT5G03720'abscisic acid' vs 'ethanol'compoundTranscription profiling by array of Arabidopsis T87 cells after treatment with abscisic acid and dimethylthiourea
Adjusted p-valueLog2-fold change
1.1033 × 10-21.6
AT5G03720'protoplasting' vs 'control'treatmentTranscription profiling by array of Arabidopsis protoplasted root cells after iron deprivation
Adjusted p-valueLog2-fold change
5.7423 × 10-13-1.5
AT5G03720'drought environment' vs 'none' in 'wild type genotype'environmental stress, genotypeTranscriptome analysis using RNA sequencing conducted for Arabidopsis thaliana Col-0 wild type and ahl10-1 mutant in response to low water potential (drought environment)
Adjusted p-valueLog2-fold change
1.0694 × 10-11-1.5
AT5G03720'18 hour' vs '6 hour' in 'pen2-1; pad4-1; sag101-2 triple loss of function mutant expressing MLA1-HA; Blumeria graminis f. sp. hordei K1; avirulent'genotype, infect, phenotype, timeTime-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.9539 × 10-111.5
AT5G03720'tunicamycin; 5 microgram per milliliter' vs 'none' in 'ire1a; ire1b double mutant'compound, genotypeExploring the link between ER stress and autophagy in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.2936 × 10-61.5
AT5G03720'thaxtomin A treated' vs 'methanol treated (control)'compoundTranscriptional profiling after inhibition of cellulose synthesis by thaxtomin and isoxaben in Arabidopsis thaliana suspension cells
Adjusted p-valueLog2-fold change
1.7318 × 10-5-1.5
AT5G03720'GID1b over expression in sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
1.8334 × 10-5-1.5
AT5G03720'RBRcs mutant' vs 'wild type' in 'sucrose; 1 percent'compound, genotypeTranscription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose
Adjusted p-valueLog2-fold change
3.8885 × 10-5-1.5
AT5G03720'ref4-3; cdk8-1' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1
Adjusted p-valueLog2-fold change
1.5387 × 10-4-1.5
AT5G03720'drought environment' vs 'normal watering' in 'vtc2.5 mutant'environmental stress, genotypeGene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
Adjusted p-valueLog2-fold change
1.9949 × 10-2-1.5
AT5G03720'lithium chloride, 100 millimolar' vs 'none'stimulusRNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
Adjusted p-valueLog2-fold change
4.4273 × 10-21.5
AT5G03720'NaCl' vs 'control' in 'columella root cap cells'cell type, growth conditionTranscription profiling by array of Arabidopsis root cells after treatment with NaCl
Adjusted p-valueLog2-fold change
3.3721 × 10-191.4
HSFA3'dja6; dja5 double mutant' vs 'wild type genotype'genotypeRNA-seq of WT and dja6 dja5 mutant in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
7.2552 × 10-181.4
AT5G03720'trichostatin; 1 micromolar' vs 'none' in 'pUBI10::mCherry-GR-linker-WUS'compound, genotypeWUSCHEL acts as a rheostat on the auxin pathway to maintain apical stem cells in Arabidopsis [RNA-seq]
Adjusted p-valueLog2-fold change
2.0848 × 10-161.4
AT5G03720'ire1b mutant' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter'compound, genotypeExploring the link between ER stress and autophagy in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
9.1842 × 10-151.4
AT5G03720'ire1a; ire1b double mutant' vs 'wild type genotype' in 'tunicamycin; 5 microgram per milliliter'compound, genotypeExploring the link between ER stress and autophagy in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.4829 × 10-7-1.4
AT5G03720'10 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
4.7446 × 10-61.4
AT5G03720'tunicamycin; 5 microgram per milliliter' vs 'none' in 'bzip17 -/- ; bzip28 -/-'compound, genotypemRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
Adjusted p-valueLog2-fold change
5.2059 × 10-6-1.4
AT5G03720'DEWAX2 overexpression' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis thaliana columbia and DEWAX2 overexpression plants line stems
Adjusted p-valueLog2-fold change
3.2925 × 10-5-1.4
AT5G03720'abscisic acid; 50 micromolar' vs 'mock' in 'ros1-3'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis mutants ros1-3 and ros1-4 treated with ABA
Adjusted p-valueLog2-fold change
1.9133 × 10-41.4
AT5G03720'15 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
2.6256 × 10-41.4
AT5G03720'syringolin; 20 micromolar' vs 'none' in 'uninfected' at '8 to 12 hour'compound, growth condition, timeTranscription profiling of by array of Arabidopsis plants infected with powdery mildew and treated with Syringolin A
Adjusted p-valueLog2-fold change
1.7297 × 10-3-1.4
AT5G03720'4 degree celsius' vs '20 degree celsius' in 'Rschew'ecotype, temperatureTranscription profiling by array of nine ecotypes of Arabidopsis before and after cold acclimation
Adjusted p-valueLog2-fold change
2.6093 × 10-3-1.4
AT5G03720'35S:MBS1 overexpression' vs 'fluorescent (flu) mutant' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response
Adjusted p-valueLog2-fold change
4.4733 × 10-3-1.4
AT5G03720'RNAi-MBS2/mbs1-1 knockdown' vs 'fluorescent (flu) mutant' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response
Adjusted p-valueLog2-fold change
1.8611 × 10-2-1.4
AT5G03720'exposed to 10 degree Celsius; wild type; 24 hour' vs 'control; wild type'environmental stress, genotype, timeGenome-wide analysis of wild type and gemin2 mutant plants [cold exposure]
Adjusted p-valueLog2-fold change
4.8702 × 10-11-1.3
AT5G03720'fls2c' vs 'wild type genotype' in 'flg22; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
2.0949 × 10-101.3
AT5G03720'hda6 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidopsis fve, fld, and hda6 mutant plants
Adjusted p-valueLog2-fold change
1.1305 × 10-61.3
AT5G03720'efr-1; elf18' at '10 hour' vs 'wild type; elf18' at '10 hour'genotype, time, treatmentExpression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2.
Adjusted p-valueLog2-fold change
1.3464 × 10-5-1.3
AT5G03720'1 micromolar salicylic acid at ZT36' vs 'water at ZT36' at '3 hour'time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with salycilic acid at ZT24 (subjective morning) or ZT36 (evening)
Adjusted p-valueLog2-fold change
3.2142 × 10-41.3
AT5G03720'pyl duodecuple loss of function mutant' vs 'wild type genotype' in 'mannitol; 300 millimolar'compound, genotypeGene expression responses to ABA and to osmotic stress in the Arabidopsis thaliana pyl duodecuple mutant
Adjusted p-valueLog2-fold change
3.9697 × 10-41.3
AT5G03720'catalase2 mutant' vs 'wild type; transferred to air for 2 days in short day length regime'genotype, growth conditionTranscription profiling by array of Arabidopsis catalase 2 mutant in response to CO2 level and photoperiod
Adjusted p-valueLog2-fold change
5.7841 × 10-4-1.3
AT5G03720'ref8-1 mutant' vs 'wild type'genotypeTranscription profiling by high throughput sequencing of Arabidospsis ref8-1, med5a/5b, and med5a/5b ref8-1 mutants
Adjusted p-valueLog2-fold change
1.0235 × 10-31.3
AT5G03720'ethanol; 2.5 percent' vs 'control' in 'wild type; 13 days in 12 h light/12 h dark (LD)'compound, genotype, growth conditionGene expression from Inducible TOC1 expression in Arabidopsis seedlings
Adjusted p-valueLog2-fold change
1.6807 × 10-3-1.3
AT5G03720'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
1.7693 × 10-31.3
AT5G03720'30 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
2.5319 × 10-31.3
AT5G03720'RALF peptide; 1 micromolar' vs 'water'compoundRALF induced transcriptome
Adjusted p-valueLog2-fold change
2.6091 × 10-31.3
AT5G03720'5-aza-2-deoxycytidine 20 milligram per liter' vs 'control' in 'wild type'genotype, growth conditionTranscription profiling by array of Arabidopsis mutant for ddm1
Adjusted p-valueLog2-fold change
3.6211 × 10-31.3
AT5G03720'phr1 mutant' vs 'wild type genotype' in 'phosphate deprivation; shoot'genotype, growth condition, organism partTranscription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation
Adjusted p-valueLog2-fold change
3.9087 × 10-31.3
AT5G03720'catalase2 mutant' vs 'wild type; transferred to air for 4 days in short day length regime'genotype, growth conditionTranscription profiling by array of Arabidopsis catalase 2 mutant in response to CO2 level and photoperiod
Adjusted p-valueLog2-fold change
6.9574 × 10-31.3
AT5G03720'warm/hot temperature regimen' vs 'none' in '35S:HSFA1b-RFP'environmental stress, genotypeGenome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
Adjusted p-valueLog2-fold change
7.6578 × 10-31.3
AT5G03720'Turnip mosaic virus' vs 'mock' in 'zone 0'infect, sampling siteTranscription profiling by of Arabidopsis leaves after infection with Potyvirus turnip mosaic virus
Adjusted p-valueLog2-fold change
1.0403 × 10-21.3
AT5G03720'Col-0 x Sei-0 F1 hybrid' vs 'Col-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '1 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
4.3482 × 10-2-1.3
AT5G03720'50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; leaf'compound, genotype, organism partTranscription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid
Adjusted p-valueLog2-fold change
2.5136 × 10-111.2
AT5G03720'mechanical stimulation' at '60 minute' vs 'none'stimulus, timeRNAseq on touch-treated Arabidopsis thaliana plants
Adjusted p-valueLog2-fold change
6.8112 × 10-91.2
AT5G03720'mechanical stimulation' at '10 minute' vs 'none'stimulus, timeRNAseq on touch-treated Arabidopsis thaliana plants
Adjusted p-valueLog2-fold change
1.7458 × 10-8-1.2
AT5G03720'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.5792 × 10-61.2
AT5G03720'lsm4 mutant' vs 'wild type' in 'Columbia ecotype'ecotype, genotypeTranscription profiling by high throughput sequencing of Arabidopsis lsm4-1 mutants and sad1/lsm5 double mutants
Adjusted p-valueLog2-fold change
3.953 × 10-5-1.2
AT5G03720'drought environment' vs 'none' in 'ahl10-1'environmental stress, genotypeTranscriptome analysis using RNA sequencing conducted for Arabidopsis thaliana Col-0 wild type and ahl10-1 mutant in response to low water potential (drought environment)
Adjusted p-valueLog2-fold change
6.001 × 10-41.2
AT5G03720'oligomycin' vs 'control' at '4 hour'growth condition, timeEffect of oligomycin on transcript levels in Arabidopsis seedling cultures
Adjusted p-valueLog2-fold change
1.011 × 10-3-1.2
AT5G03720'low water potential stress' vs 'control' in 'hai1-2 mutant'genotype, growth conditionComparison of low water potential (drought)-regulated gene expression in wild type (Col-0) and the hai1-2 (At5g59220) mutant
Adjusted p-valueLog2-fold change
2.1605 × 10-31.2
AT5G03720'mbd11 mutant' vs 'wild type genotype'genotypeTranscription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana
Adjusted p-valueLog2-fold change
2.3865 × 10-3-1.2
AT5G03720'wild type; Botrytis cinerea 2100' vs 'wild type; mock'genotype, infectWRKY33-dependent expression of Arabidopsis genes upon Botrytis cinerea 2100 inoculation
Adjusted p-valueLog2-fold change
2.8731 × 10-3-1.2
AT5G03720'water deprivation' vs 'control'growth conditionTranscription profiling by array of Arabidopsis after water deprivation
Adjusted p-valueLog2-fold change
7.2773 × 10-3-1.2
AT5G03720'mbs1-1 mutant' vs 'fluorescent (flu) mutant' in 'high light'genotype, growth conditionTranscription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response
Adjusted p-valueLog2-fold change
7.5833 × 10-8-1.1
AT5G03720'2 day' vs '0 day'timeTranscription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
Adjusted p-valueLog2-fold change
1.3958 × 10-7-1.1
AT5G03720'pepr1/2' vs 'wild type genotype' in 'Pep1; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.062 × 10-61.1
AT5G03720'NSRa/NSRb' vs 'wild type'genotypeAlternative RNA processing events in a double NSR mutant Arabidopsis
Adjusted p-valueLog2-fold change
1.6129 × 10-4-1.1
AT5G03720'light pulse at ZT18' vs 'control'environmental stressTranscription profiling by high throughput sequencing of Arabidopsis exposed to a pulse of white light at ZT18 to study the effect of light on alternative splicing
Adjusted p-valueLog2-fold change
1.6313 × 10-41.1
AT5G03720'high light; RAP2.4a T-DNA Insertion (At1g36060)' vs 'control; RAP2.4a T-DNA Insertion (At1g36060)'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
2.0971 × 10-41.1
AT5G03720'from low light to high light; wild type' vs 'control; wild type'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
2.3111 × 10-4-1.1
AT5G03720'sly1-2 mutant' vs 'wild type genotype' in '2 weeks dry after-ripening' plus '12 hour growth in light'environmental history, genotype, sampling time pointTranscriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
Adjusted p-valueLog2-fold change
2.3846 × 10-4-1.1
AT5G03720'ozone; 350 nanoliter' vs 'none' in 'Shahdara'compound, ecotypeTranscriptome analysis of apoplastic reactive oxygen species signalling in Arabidopsis thaliana accessions with varying ozone sensitivity.
Adjusted p-valueLog2-fold change
2.8122 × 10-4-1.1
AT5G03720'CT101; 350 ppb ozone exposure for 2hr' vs 'CT101; control'genotype, treatmentQuantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
Adjusted p-valueLog2-fold change
3.1074 × 10-41.1
AT5G03720'high light; wild type' vs 'control; wild type'environmental stress, genotypeTranscription profiling by array of Arabidopsis thaliana Col-0 and RAP2.4a mutants under time dependent light stress by transfer to high light
Adjusted p-valueLog2-fold change
3.7812 × 10-4-1.1
AT5G03720'methyl jasmonate' vs 'mock' in 'wild type'compound, genotypeExpression profiling of wild-type Arabidopsis and an activation-tagged jaz7-1D line.
Adjusted p-valueLog2-fold change
5.0484 × 10-4-1.1
AT5G03720'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'spx1,spx2 double mutant'genotype, growth conditionExpression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate
Adjusted p-valueLog2-fold change
5.51 × 10-4-1.1
AT5G03720'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
7.96 × 10-41.1
AT5G03720'hmr-5 null mutant' vs 'wild type genotype'genotypeTranscription profiling by array of Arabidopsis hemera null (hmr-5) and weak-allele (hmr-22) photomorphogenetic mutants against wild-type controls grown under red light
Adjusted p-valueLog2-fold change
9.5262 × 10-4-1.1
AT5G03720'methyl jasmonate' vs 'mock' in 'jaz7-1D'compound, genotypeExpression profiling of wild-type Arabidopsis and an activation-tagged jaz7-1D line.
Adjusted p-valueLog2-fold change
1.3436 × 10-3-1.1
AT5G03720'flg22; 1 millimolar' vs 'none' in 'wild type genotype' at '180 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
1.3962 × 10-3-1.1
AT5G03720'35S::MIF1; dark' vs 'empty pRR2222 vector; dark'genotype, growth conditionTranscription profiling by array of Arabidopsis expressing MIF1 under the control of the 35S promoter after growth in light or dark conditions
Adjusted p-valueLog2-fold change
2.7616 × 10-3-1.1
AT5G03720'pft1-1; 16 degree celsius' vs 'pft1-1; 23 degree celsius'genotype, temperaturePFT1, the MED25 subunit of the plant Mediator complex, promotes flowering through CONSTANS dependent and independent mechanisms in Arabidopsis
Adjusted p-valueLog2-fold change
2.9154 × 10-31.1
AT5G03720'msh1 albino mutant' vs 'wild type'genotypeTranscript profiling of Arabidopsis albino msh1 mutants
Adjusted p-valueLog2-fold change
3.0632 × 10-3-1.1
AT5G03720'ref4-3' vs 'wild type genotype'genotypeGene expression profiling of the Arabidopsis Mediator MED5 mutants ref4-1 and ref4-3, CDK8 mutant cdk8-1 and ref4-3 cdk8-1
Adjusted p-valueLog2-fold change
3.607 × 10-31.1
AT5G03720'clf28 mutant' vs 'wild type' in 'root'genotype, organism partTranscription profiling by high throughput sequencing of Arabidopsis roots, shoots, inflorescences, and siliques of wild type and clf-28 mutant plants
Adjusted p-valueLog2-fold change
1.5368 × 10-21.1
AT5G03720'60 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
5.2433 × 10-61
AT5G03720'Sei-0 x Col-0 F1 hybrid' vs 'Sei-0' in 'Pseudomonas syringae pv. tomato str. DC3000' at '3 day'genotype, infectTranscription profiling by high throughput sequencing of two Arabidopsis accessions, Col-0 and Sei-0, and their reciprocal hybrids after infiltration with Pst DC3000
Adjusted p-valueLog2-fold change
1.0805 × 10-5-1
AT5G03720'auxin' vs 'none' in '7 day'age, growth conditionTranscription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin
Adjusted p-valueLog2-fold change
6.5133 × 10-5-1
AT5G03720'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour'genotype, infect, timeTranscription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum
Adjusted p-valueLog2-fold change
8.8921 × 10-51
AT5G03720'pap1-D/tt4' vs 'wild type'genotypeTranscriptome analysis in flavonoid overaccumulating and lacking Arabidopsis.
Adjusted p-valueLog2-fold change
1.9779 × 10-4-1
AT5G03720'sd1-29' vs 'wild type genotype' in '3-OH-FA; 1 millimolar' at '30 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
2.8558 × 10-4-1
AT5G03720'Phytophthora infestans' vs 'none' in 'erp1 mutant' at '6 hour'genotype, infect, timeMetabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans
Adjusted p-valueLog2-fold change
6.425 × 10-4-1
AT5G03720'abscisic acid; 0.1 millimolar' vs 'none' in 'wild type'compound, genotypeTranscription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment
Adjusted p-valueLog2-fold change
1.2251 × 10-3-1
AT5G03720'4 degree celsius' vs '20 degree celsius' in 'Coimbra'ecotype, temperatureTranscription profiling by array of nine ecotypes of Arabidopsis before and after cold acclimation
Adjusted p-valueLog2-fold change
3.0074 × 10-31
AT5G03720'60 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone'compound, genotype, organism part, timeTranscription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin
Adjusted p-valueLog2-fold change
3.5732 × 10-31
AT5G03720'exposed to 10 degree Celsius; wild type; 1 hour' vs 'control; wild type'environmental stress, genotype, timeGenome-wide analysis of wild type and gemin2 mutant plants [cold exposure]
Adjusted p-valueLog2-fold change
7.4837 × 10-3-1
AT5G03720'dcl1-15 mutant' vs 'wild type'genotypeTranscription profiling by array of Arabidopsis wild-type and dcl1-15 torpedo-staged embryos
Adjusted p-valueLog2-fold change
1.1009 × 10-21
AT5G03720'pBeaconRFP_GR::bZIP1; Treated with cycloheximide, 10 uM dexamethasone in ethanol, 20 mM KCl' vs 'empty vector; Treated with cycloheximide, ethanol, 20 mM KCl'genotype, treatmentHit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis
Adjusted p-valueLog2-fold change
2.0958 × 10-21
AT5G03720'efr-1' vs 'wild type genotype' in 'elf18; 1 millimolar' at '90 minute'compound, genotype, timeRNAseq of wt and receptor mutant lines in response to 7 elicitor treatments over a 6-point time course
Adjusted p-valueLog2-fold change
3.3807 × 10-21
AT5G03720'fbl17-1 (GK_170-E02)' vs 'wild type genotype'genotypeRNAseq analysis of Arabidopsis Col-0 wild-type and fbl17 mutant seedlings
Adjusted p-valueLog2-fold change
4.5385 × 10-2-1
AT5G03720'steady-state RNA; 4 hour; white light' vs'steady-state RNA; dark'RNA, time, treatmentTranscription profiling by array of Arabidopsis seedlings treated with white light