7.4 | | AT5G51190 | 'cycloheximide' vs 'dimethyl sulfoxide' in '60 micromolar' | compound | Transcription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes |
7.3 | | AT5G51190 | 'cycloheximide (60 micromolar) and dexamethasone (60 micromolar)' vs 'dimethyl sulfoxide; 60 micromolar' | compound | Transcription profiling by array of Arabidopsis thaliana shoots treated with either DEX or CHX to identify STM-regulated target genes |
6.4 | | AT5G51190 | 'cycloheximide' vs 'mock' | treatment | Transcription profiling of Arabidopsis WUSCHEL targets |
6.1 | | AT5G51190 | 'RALF peptide; 1 micromolar' vs 'water' | compound | RALF induced transcriptome |
6.1 | | AT5G51190 | 'cycloheximide, dexamethasone' vs 'mock' | treatment | Transcription profiling of Arabidopsis WUSCHEL targets |
-5.8 | | AT5G51190 | 'RPS4 over-expression on eds1 mutant background' vs 'RPS4 over-expression' at '2 hour' | phenotype, time | Transcription profiling by array of temperature-inducible transgenic Arabidopsis over-expressing RPS4 in EDS1 wild-type, eds1 or rrs1 mutant backgrounds 0, 2, 8, and 24 hours after induction to study RPS4-mediated innate immune response |
5.8 | | AT5G51190 | 'antimycin A; 50 micromolar' vs 'water' in 'wild type' | compound, genotype | Transcription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A |
5.3 | | AT5G51190 | 'antimycin A; 50 micromolar' vs 'water' in 'rao1-1 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A |
5.3 | | AT5G51190 | 'antimycin A; 50 micromolar' vs 'water' in 'rao1-2 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis Col:LUC and rao1 mutants under 3 hour stress treatment with antimycin A |
5.2 | | AT5G51190 | 'chitooctaose; 1 micromolar' vs 'none' in 'wild type' | compound, genotype | Comparison of gene expression profiles between erf5/6 and WT Arabidopsis in response to chitooctaose |
5 | | AT5G51190 | 'chitooctaose; 1 micromolar' vs 'none' in 'erf5/6 double mutant' | compound, genotype | Comparison of gene expression profiles between erf5/6 and WT Arabidopsis in response to chitooctaose |
4.9 | | AT5G51190 | 'antimycin A; 50 micromolar; anac017-1' vs 'water; anac017-1' | compound, genotype | Transcription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals |
4.5 | | AT5G51190 | 'antimycin A; 50 micromolar; rao2_EMS_mutant' vs 'water; rao2_EMS_mutant' | compound, genotype | Transcription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals |
4.3 | | AT5G51190 | 'chr11-1, chr17-1 double mutant' vs 'wild type' at '0 day' | genotype, time | Transcription profiling by array of Arabidopsis leaf explants cultured in CIM from chr11-1, chr17-1 double mutant at 0 and 8 days after culture. |
4.2 | | AT5G51190 | '15 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
4.2 | | AT5G51190 | 'chitin' vs 'none' in 'rre1 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin |
4.1 | | AT5G51190 | 'crab shell chitin' vs 'water' | compound | Transcription profiling by array of Arabidopsis after treatment with crab shell chitin or chitin octamer |
4.1 | | AT5G51190 | 'dehydration; 46T' vs 'none; 46T' | environmental stress, genotype | Transcription factor WRKY46 regulates osmotic stress responses and stomatal movement tissue specifically and independently in Arabidopsis |
4 | | AT5G51190 | 'chitin' vs 'none' in 'wild type' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin |
3.9 | | AT5G51190 | 'chitin octamer' vs 'water' | compound | Transcription profiling by array of Arabidopsis after treatment with crab shell chitin or chitin octamer |
3.9 | | AT5G51190 | '15 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
3.8 | | AT5G51190 | 'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'wild type' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
-3.8 | | AT5G51190 | 'OsSAP11 transgenic' vs 'wild type' | genotype | Rice A20/AN1 zinc-finger containing stress-associated proteins (SAP1/11) and a receptor-like cytoplasmic kinase (OsRLCK253) interact via A20 zinc-finger and confer abiotic stress tolerance in transgenic Arabidopsis plants |
3.8 | | AT5G51190 | 'chitin' vs 'none' in 'rre2 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rre1 or rre2 after treatment with chitin |
-3.8 | | AT5G51190 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; guard cells' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
3.7 | | AT5G51190 | 'cycloheximide' vs 'control' | treatment | Transcription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts |
3.6 | | AT5G51190 | '2 hr hypoxia' vs '2 hr control' in 'polysomal mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
3.6 | | AT5G51190 | 'nematode aqueous diffusate' vs 'control' | stimulus | Transcription profiling by array of Arabidopsis roots treated with nematode aqueous diffusate (NemaWater) |
3.5 | | AT5G51190 | 'phosphate-lacking medium' vs 'complete medium' in 'spx1,spx2 double mutant' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
3.5 | | AT5G51190 | 'phosphate-lacking medium' vs 'complete medium' in 'wild type' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
3.5 | | AT5G51190 | 'antimycin A; 50 micromolar; wild type' vs 'water; wild type' | compound, genotype | Transcription profiling by array of Arabidopsis to investogate reactive oxygen signals and specific mitochondrial retrograde stress signals |
3.4 | | AT5G51190 | 'dexamethasone and cycloheximide' vs 'control' | treatment | Transcription profiling by array of Arabidopsis transcription factor ABI3 in root protoplasts |
3.4 | | AT5G51190 | '2 hr hypoxia' vs '2 hr control' in 'total mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
-3.4 | | AT5G51190 | 'sucrose; 1 percent' vs 'none' in 'wild type' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose |
3.2 | | AT5G51190 | 'double mutant at3g03940/at518190 knockdown' vs 'wild type' | genotype | Osmotic stress induces phosphorylation of histone H3 at threonine 3 in pericentromeric regions of Arabidopsis thaliana [expression] |
-3.2 | | AT5G51190 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'wild type genotype; guard cells' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
3.2 | | AT5G51190 | 'sid2-2; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection' | genotype, infect, sampling time point | Responses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection |
3.2 | | AT5G51190 | 'mbd11 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana |
3.1 | | AT5G51190 | 'drought stress' vs 'none' in 'control' at '2 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress |
3.1 | | AT5G51190 | '15 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; root meristem' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
3 | | AT5G51190 | '9 hr hypoxia' vs '9 hr control' in 'polysomal mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
3 | | AT5G51190 | 'drought stress' vs 'none' in 'ABF3 overexpression' at '24 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress |
-3 | | AT5G51190 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 mutant; guard cells' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
3 | | AT5G51190 | 'dehydration; wild type' vs 'none; wild type' | environmental stress, genotype | Transcription factor WRKY46 regulates osmotic stress responses and stomatal movement tissue specifically and independently in Arabidopsis |
2.9 | | AT5G51190 | 'drought stress' vs 'none' in 'ABF3 overexpression' at '2 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress |
-2.8 | | AT5G51190 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 gpa1-4 double mutant; guard cells' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
2.7 | | AT5G51190 | 'dehydration stress' vs 'control' in 'srk2dei triple mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
2.7 | | AT5G51190 | 'protoplasting' vs 'control' | treatment | Transcription profiling by array of Arabidopsis protoplasted root cells after iron deprivation |
-2.7 | | AT5G51190 | 'complete solution minus iron; 48 hour' vs 'complete solution; 24 hour' in 'Kas-1' | ecotype, growth condition, time | Transcription profiling by array of Arabidopsis Kas-1 and Tsu-1 ecotypes in response to iron deficiency |
2.7 | | AT5G51190 | 'drought stress' vs 'none' in 'control' at '24 hour' | environmental stress, genotype, time | Transcription profiling by array of Arabidopsis thaliana transgenic plants overexpressing ABF3 under drought stress |
-2.7 | | AT5G51190 | 'drought' vs 'control' in 'wild type; leaf' | genotype, growth condition, organism part | Role of CAMTA1 gene under drought stress |
-2.7 | | AT5G51190 | 'iron deprivation' vs. 'control' at '24 hours' in 'root' of 'Kas-1' ecotype | ecotype, organism part, growth condition, time | Transcription profiling by array of Arabidopsis Kas-1 and Tsu-1 grown in iron-deficient medium |
2.7 | | AT5G51190 | '2-hexenal' vs 'mock' at '1 hour' | compound, time | Transcription profiling by array of Arabidopsis rosette leaves in response to aerial E-2-hexenal, one of the green leaf volatiles |
-2.7 | | AT5G51190 | 'TaFLS overexpression line 2 (OE2)' vs 'wild type' | genotype | Expression data from Arabidopsis leaves |
2.6 | | AT5G51190 | '9 hr hypoxia' vs '9 hr control' in 'total mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
2.6 | | AT5G51190 | 'sid2-2; Alternaria brassicicola' at '24 hours post infection' vs 'wild type; mock' at '24 hours post infection' | genotype, infect, sampling time point | Responses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection |
-2.6 | | AT5G51190 | 'complete solution minus iron; 24 hour' vs 'complete solution; 24 hour' in 'Kas-1' | ecotype, growth condition, time | Transcription profiling by array of Arabidopsis Kas-1 and Tsu-1 ecotypes in response to iron deficiency |
2.6 | | AT5G51190 | 'ein2-1; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection' | genotype, infect, sampling time point | Responses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection |
-2.6 | | AT5G51190 | 'coi1-2 mutant' vs 'wild type genotype' in 'none' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
2.6 | | AT5G51190 | '10 micromolar; dexamethasone' vs 'none' at '8 hour' | compound, time | Identifying FIL-response genes |
2.6 | | AT5G51190 | 'high light' vs 'control' | environmental stress | Gene expression from Arabidopsis under high light conditions |
2.5 | | AT5G51190 | '9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'polysomal mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
2.5 | | AT5G51190 | '15 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; root meristem' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
2.5 | | AT5G51190 | '5-aza-2-deoxycytidine 20 milligram per liter' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ddm1 |
-2.5 | | AT5G51190 | 'OsRLCK253 transgenic' vs 'wild type' | genotype | Rice A20/AN1 zinc-finger containing stress-associated proteins (SAP1/11) and a receptor-like cytoplasmic kinase (OsRLCK253) interact via A20 zinc-finger and confer abiotic stress tolerance in transgenic Arabidopsis plants |
-2.5 | | AT5G51190 | 'sub-zero acclimation' vs 'cold acclimation' in 'Rschew' at '72 hour' | ecotype, environmental stress, time | Transcription profiling by array of three Arabidopsis accessions under acclimation to sub-zero temperature at -3 degree Celsius after cold acclimation |
-2.5 | | AT5G51190 | 'sub-zero acclimation' vs 'cold acclimation' in 'Rschew' at '24 hour' | ecotype, environmental stress, time | Transcription profiling by array of three Arabidopsis accessions under acclimation to sub-zero temperature at -3 degree Celsius after cold acclimation |
-2.4 | | AT5G51190 | 'auxin' vs 'none' in '7 day' | age, growth condition | Transcription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin |
2.4 | | AT5G51190 | 'ire1a/ire1b' vs 'wild type' in 'tunicamycin 5 milligram per liter' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for ire1 after treatment with tunicamycin |
2.4 | | AT5G51190 | 'hypoxia' vs 'normoxia' in 'HRE1-RNAi20' | genotype, growth condition | Transcription profiling by array of Arabidopsis with RNAi-mediated knockdown of AtERF73/HRE1 after growth in hypoxic conditions |
2.4 | | AT5G51190 | 'phosphate deprivation' vs 'control' in 'wild type genotype; shoot' | genotype, growth condition, organism part | Transcription profiling by array of Arabidopsis mutant for phr1 and phl1 or phr1 only after phosphate deprivation |
2.4 | | AT5G51190 | 'Sclerotinia sclerotiorum' vs 'none' in 'coi1-2 mutant' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
2.4 | | AT5G51190 | '0.125 mM gold for 24 hours' vs 'untreated control' | growth condition | Transcription profiling by array of roots of hydroponically grown Arabidopsis treated with 0.125 mM gold against untreated control to study the uptake of gold |
-2.3 | | AT5G51190 | 'spx1,spx2 double mutant' vs 'wild type' in 'phosphate-lacking medium and resupplied with Pi for 4 h' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
2.3 | | AT5G51190 | 'seed after 12 h of stratification (12 h S)' vs 'seed after 1 h of stratification (1 h S)' | growth condition | Transcription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination |
-2.3 | | AT5G51190 | 'npr1-3' vs 'wild type' in '3,5-dichloroanthranilic acid' at '2 day' | compound, genotype, time | Transcription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid |
-2.3 | | AT5G51190 | 'rdr6-15 mutant' vs 'wild type' in 'Col-0' | ecotype, genotype | Transcription profiling by array of Arabidopsis mutant for dcl1, dcl2, hen1, hst, hyl1, rdr1, rdr2, or rdr6 |
2.2 | | AT5G51190 | 'bak1-3; Pep2' at '2 hour' vs 'wild type; Pep2' at '2 hour' | genotype, time, treatment | Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2. |
-2.2 | | AT5G51190 | 'auxin' vs 'none' in '35 day' | age, growth condition | Transcription profiling by array of young and old hypocotyls from Arabidopsis after treatment with auxin |
2.2 | | AT5G51190 | '30 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
-2.2 | | AT5G51190 | 'water deprivation' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis after water deprivation |
-2.2 | | AT5G51190 | 'fls1-3 mutant' vs 'wild type' | genotype | Expression data from Arabidopsis leaves |
2.1 | | AT5G51190 | 'Hyaloperonospora parasitica arabidopsis Noco2' vs 'none' in 'wild type' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for wrky72 after infection with Hyaloperonospora parasitica arabidopsis Noco2 |
2.1 | | AT5G51190 | 'bzr1-1D;bri1-116 double mutant' vs 'bri1-116 null mutant' | genotype | Transcription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only |
2.1 | | AT5G51190 | 'indole-3-acetic acid and furyl acrylate ester of thiadazole heterocycle' vs 'none' | growth condition | Transcription profiling by array of Arabidopsis after treatment with inhibitors of auxin transcriptional activation |
2.1 | | AT5G51190 | '35S:BatIMS knock-in' vs 'empty vector' | genotype | Transcription profiling by array of Arabidopsis seedlings overexpressing an IPMS gene from Brassica (BatIMS) |
2.1 | | AT5G51190 | 'Rose Bengal; 0.5 micromolar' vs 'none' | compound | Transcription profiling by array of Arabidopsis cell suspension cultures subjected to mild treatments with three different singlet oxygen elicitors (Indigo Carmine (IC), Methylene Violet (MV) and Rose Bengal (RB)) against untreated controls |
2.1 | | AT5G51190 | 'axr3-1 mutant' vs 'wild type' in 'indole-3-acetic acid' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid |
-2.1 | | AT5G51190 | 'sub-zero acclimation' vs 'cold acclimation' in 'Te-0' at '24 hour' | ecotype, environmental stress, time | Transcription profiling by array of three Arabidopsis accessions under acclimation to sub-zero temperature at -3 degree Celsius after cold acclimation |
-2 | | AT5G51190 | '3% glucose; 0.1% epibrassinolide' vs 'none' | growth condition | Genome wide analysis of glucose brassinosteroid interaction in Arabidopsis |
2 | | AT5G51190 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'C24' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
2 | | AT5G51190 | '9 hr hypoxia + 1hr recovery' vs '9 hr control' in 'total mRNA' | RNA, growth condition | Transcription profiling by array of Arabidopsis after short and prolonged hypoxia treatment |
2 | | AT5G51190 | '50 micromolar abscisic acid' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
-2 | | AT5G51190 | 'pap1-D/tt4' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
2 | | AT5G51190 | 'Golovinomyces orontii; 8 hour' vs 'none; 0 hour' in 'wild type' | genotype, infect, time | Transcription profiling by array of Arabidopsis thaliana WRKY18/40 double knock out infected with Golovinomyces orontii |
-2 | | AT5G51190 | 'arr22-ox' vs 'wild type' in 'none' | genotype, growth condition | Transcription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin |
2 | | AT5G51190 | 'AP1::AtIPT4 transgenic plant' vs 'wild type' | genotype | Transcription profiling by array of young inflorescences of AP1∷AtIPT4 Arabidopsis thaliana transgenic plants to identify the candidate genes responsive to cytokinin |
2 | | AT5G51190 | 'dde2-2; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection' | genotype, infect, sampling time point | Responses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection |
2 | | AT5G51190 | 'wild type; Alternaria brassicicola' at '9 hours post infection' vs 'wild type; mock' at '9 hours post infection' | genotype, infect, sampling time point | Responses of Arabidopsis immune signaling mutants to Alternaria brassicicola infection |
-1.9 | | AT5G51190 | '60 minutes after cordycepin treatment' vs 'immediately after cordycepin treatment' in 'xrn3-8 mutant' | genotype, sampling time point | Transcription profiling by array of a stably RNAi-silenced nuclear 5’-3’ exonuclease XRN3 mutant line in Arabidopsis thaliana after transcriptional inhibition with cordycepin |
-1.9 | | AT5G51190 | 'MYB12OX/tt4' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
1.9 | | AT5G51190 | 'Phytophthora infestans' vs 'none' in 'wild type' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-1.9 | | AT5G51190 | 'abscisic acid; 20 micromolar' vs 'none' in 'endosperm' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
-1.9 | | AT5G51190 | 'sub-zero acclimation' vs 'cold acclimation' in 'Te-0' at '72 hour' | ecotype, environmental stress, time | Transcription profiling by array of three Arabidopsis accessions under acclimation to sub-zero temperature at -3 degree Celsius after cold acclimation |
1.9 | | AT5G51190 | 'spaceflight environment' vs 'ground control' in 'root' | growth condition, organism part | Transcription profiling by array of Arabidopsis whole plants and discrete root, hypocotyl and shoot responses to spaceflight |
-1.8 | | AT5G51190 | 'arr21c overexpressing line' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing arr21c |
-1.8 | | AT5G51190 | 'cys-c1 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for cys-c1 |
1.8 | | AT5G51190 | 'hypoxia' vs 'normoxia' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis with RNAi-mediated knockdown of AtERF73/HRE1 after growth in hypoxic conditions |
-1.8 | | AT5G51190 | 'ethanol' at '4 hour' vs 'control' at '0 hour' | compound, time | Transcription profiling by array of Arabidopsis XW119 seedlings after induction with ethanol |
1.8 | | AT5G51190 | 'phosphate-lacking medium and resupplied with Pi for 4 h' vs 'complete medium' in 'spx1,spx2 double mutant' | genotype, growth condition | Expression data from Col-0 and sp1,spx2 under phosphate starvation stress and recovery after resupplying phosphate |
1.8 | | AT5G51190 | 'bleomycin and 2, 6-dichloroisonicotinic acid' vs 'none' | stimulus | Transcription profiling by array of Arabidopsis seedlings grown after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment to identify synergistically induced defence genes |
1.8 | | AT5G51190 | 'systemically damaged by leafminer' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis leaves with localised or systemic damage by leafminer Liriomyza huidobrensis |
1.8 | | AT5G51190 | 'furyl acrylate ester of thiadazole heterocycle' vs 'none' | growth condition | Transcription profiling by array of Arabidopsis after treatment with inhibitors of auxin transcriptional activation |
1.8 | | AT5G51190 | 'frb1 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for frb1 |
1.8 | | AT5G51190 | 'Phytophthera infestans' vs 'none' at '6 hour' | infect, time | Transcription profiling by array of Arabidopsis after infection with Phytophthera infestans |
1.8 | | AT5G51190 | 'epfl4, epfl6 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis developing inflorescence tips from er-2 mutant and epfl4, epfl6 double mutant |
1.8 | | AT5G51190 | 'ga1-3, brm-1 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis ga1-3 mutants, brm-1 mutants and ga1-3, brm-1 double mutants |
1.8 | | AT5G51190 | 'dexamethasone-induced STM overexpression' vs 'dexamethasone-induced STM knock down by RNAi' at '216 hour' | phenotype, sampling time point | Transcription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls |
1.8 | | AT5G51190 | '30 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
-1.8 | | AT5G51190 | 'mbs1-1 mutant' vs 'wild type genotype' in 'high light' | genotype, growth condition | Transcription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response |
-1.8 | | AT5G51190 | 'RNAi-MBS2/mbs1-1 knockdown' vs 'wild type genotype' in 'high light' | genotype, growth condition | Transcription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response |
1.8 | | AT5G51190 | 'fdh-3940 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis mutant for bodyguard (bdg), lacerata (lcr) and fiddlehead (fdh) against wild-type controls |
-1.8 | | AT5G51190 | 'water deprivation' vs 'control' in 'pKYL71-35S::InsP5-ptase (line “T8”)' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation |
-1.7 | | AT5G51190 | 'mil4 sid2 double mutant' vs 'wild type' in 'water' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for mil4 and/or sid2 after treatment with benzothiadiazole |
-1.7 | | AT5G51190 | 'mil4 mutant' vs 'wild type' in 'water' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for mil4 and/or sid2 after treatment with benzothiadiazole |
1.7 | | AT5G51190 | 'mbd6 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of atmbd4, atmbd6 and atmbd11 mutants of Arabidopsis thaliana |
1.7 | | AT5G51190 | 'indole-3-acetic acid; 5 micromolar' vs 'none' in 'epidermis' | compound, organism part | Transcription profiling by array of four distinct tissues of Arabidopsis root and whole root treated with (auxin) indole-3-acetic acid against mock-treated controls |
-1.7 | | AT5G51190 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Sha' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
1.7 | | AT5G51190 | '50 micromolar antimycin A' vs 'none' | treatment | Expression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue |
1.7 | | AT5G51190 | 'Blumeria graminis f.sp. hordei' vs 'none' in 'ataf1-1' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei |
1.7 | | AT5G51190 | '60 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
1.7 | | AT5G51190 | 'LBD37 overexpression' vs 'wild type' in 'nitrogen depletion' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for or overexpressing LBD37 and LBD38 after nitrogen deprivation |
1.7 | | AT5G51190 | '10 micromolar; dexamethasone' vs 'none' at '4 hour' | compound, time | Identifying FIL-response genes |
1.7 | | AT5G51190 | 'ethanol; 2.5 percent' vs 'control' in 'wild type; 13 days in 12 h light/12 h dark (LD)' | compound, genotype, growth condition | Gene expression from Inducible TOC1 expression in Arabidopsis seedlings |
-1.7 | | AT5G51190 | 'mbs1-1 mutant' vs 'fluorescent (flu) mutant' in 'high light' | genotype, growth condition | Transcription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response |
-1.7 | | AT5G51190 | 'RNAi-MBS2/mbs1-1 knockdown' vs 'fluorescent (flu) mutant' in 'high light' | genotype, growth condition | Transcription profiling by array of Arabidopsis plants overexpressing or mutant for MBS genes against wild type controls or flu mutants (which produce lots of singlet oxygen when exposed to light) to study NBS as a mediator of singlet oxygen response |
1.7 | | AT5G51190 | '3% mannitol' at '4 hour' vs 'control' at '0 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after treatment with glucose, mannose and abcissic acid |
-1.7 | | AT5G51190 | 'water deprivation' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis expressing mammalian type I inositol polyphosphate 5-phosphatase under the control of the 35S promoter after water deprivation |
-1.7 | | AT5G51190 | '3% glucose' vs 'none' | growth condition | Genome wide analysis of glucose brassinosteroid interaction in Arabidopsis |
1.6 | | AT5G51190 | 'At3g24500 overexpression' vs 'wild type' | genotype | Over-expression of MBF1c enhances stress tolerance |
-1.6 | | AT5G51190 | 'seed after 48 h of stratification (48 h S)' vs 'seed after 12 h of stratification (12 h S)' | growth condition | Transcription profiling by array of Arabidopsis seeds during the germination ripening, stratification and germination |
-1.6 | | AT5G51190 | 'sodium sulfide; wild type' vs 'water; wild type' | compound, genotype | Exogenous Sulfide Reverses the Alteration of Transcriptional Profiling of the des1-1 Mutant (Arabidopsis thaliana) |
1.6 | | AT5G51190 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Fei-0' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
-1.6 | | AT5G51190 | 'homozygous AtCesA4' vs 'heterozygous AtCesA4' | genotype | Transcription profiling by array of Arabidopsis cellulose synthase mutants |
-1.6 | | AT5G51190 | 'indole-3-acetic acid; 0.5 hour' vs 'no compound; 0 hour' in 'Bay-0' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
1.6 | | AT5G51190 | 'camta1/2/3 mutant; grown at 22 C and treated at 4 C for 24 hours' vs 'wild type; grown at 22 C and treated at 4 C for 24 hours' | genotype, growth condition | Expression data from WT, camta1/2, camta1/3, camta2/3, camta1/2/3 mutants |
-1.6 | | AT5G51190 | 'sucrose; 1 percent' vs 'none' in 'RBRcs mutant' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose |
1.6 | | AT5G51190 | '30 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; root meristem' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
1.6 | | AT5G51190 | 'srk2dei triple mutant' vs 'wild type' in 'dehydration stress' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
1.5 | | AT5G51190 | 'gul2-1 bri1-5 double mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis wild type, brassinosteroid insensitive1 mutant (bri1-5), long-hypocotyl mutant phytochrome B (gul2-1/phyB-77), and bri1-5 gul2-1 double mutant to study gene expression controlled by light and brassinosteroids |
-1.5 | | AT5G51190 | 'tt4' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
-1.5 | | AT5G51190 | 'sid2 mutant' vs 'wild type' in 'water' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for mil4 and/or sid2 after treatment with benzothiadiazole |
-1.5 | | AT5G51190 | 'bri1-5' vs 'wild type' | genotype | Genome-wide expression analysis of bri1-5 and its suppressors brs1-1D, bak1-1D, bri1-1D |
1.5 | | AT5G51190 | 'VIP2 overexpression' vs 'wild type genotype' at '0 hour' | genotype, time | Transcriptome analysis of Arabidopsis VIRE2-INTERACTING PROTEIN2 Overexpressor in Agrobacterium-mediated plant transformation and abiotic stresses |
-1.5 | | AT5G51190 | 'low pH (pH 4.6)' vs 'standard pH (pH 5.7)' in 'root endodermis and quiescent center' | growth condition, organism part | Transcription profiling by array of Arabidopsis root cells after growth in low pH conditions |
1.5 | | AT5G51190 | 'indole-3-acetic acid' vs 'none' in 'nph4-1' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for nph4 or arf19 or both after treatment with indole-3-acetic acid |
-1.5 | | AT5G51190 | 'apl mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis phloem from Altered Phloem Development (APL) mutants and wild type controls |
-1.5 | | AT5G51190 | 'atsf1-2 mutant' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis wild type and atsf1-2 mutant seedlings |
1.5 | | AT5G51190 | 'Phytophthora infestans' vs 'none' in 'erp140 mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-1.5 | | AT5G51190 | 'methyl jasmonate' vs 'mock' in 'wild type' | compound, genotype | Expression profiling of wild-type Arabidopsis and an activation-tagged jaz7-1D line. |
1.4 | | AT5G51190 | 'gir1 mutant; none' vs 'wild type; none' in 'flower' | compound, genotype, organism part | Gene expression profile in root and flower of gir1 mutant |
1.4 | | AT5G51190 | 'pH 4.5' vs 'pH 6' at 8 hour | growth condition, time | Transcription profiling by array of Arabidopsis grown at low pH |
-1.4 | | AT5G51190 | 'sodium chloride; 50 millimolar; atpao5-3 mutant' vs 'none; ; atpao5-3 mutant' | compound, genotype | Transcription profiling by array of Arabidopsis wild type and polyamine oxidase 5 loss-of-function mutant exposed to sodium chloride |
1.4 | | AT5G51190 | 'indole-3-acetic acid' vs 'none' in 'nph4-1 arf19-1' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for nph4 or arf19 or both after treatment with indole-3-acetic acid |
-1.4 | | AT5G51190 | 'pif1pif3pif4pif5 (pifq) mutant; 3 days in continuous light plus Red/Far-Red ratio 0.006' at '0 hour' vs 'wild type; 3 days in continuous light plus Red/Far-Red ratio 0.006' at '0 hour' | genotype, light, time | Expression data from WT (Columbia) and pifq (pif1pif3pif4pif5) mutant Arabidopsis seedlings |
1.4 | | AT5G51190 | '2-(4-carboxyphenyl)-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide' vs 'none' | compound | Expression data from Arabidopsis thaliana treated with NO donor SNP, compared to NO depletion by cPTIO |
1.4 | | AT5G51190 | 'salicylic acid' vs 'control' in 'npr1 sni1 mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for npr1, sni1, ssn2 and/or brca2a after treatment with salicylic acid |
1.4 | | AT5G51190 | 'oas-a1.1' vs 'wild type' in 'CdCl2-treated root' at '18 hour' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis mutant for oas-a1 after treatment with cadmium chloride |
1.4 | | AT5G51190 | 'atx1-1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for atx1 |
1.4 | | AT5G51190 | 'dexamethasone-induced STM overexpression' vs 'wild type' at '216 hour' | phenotype, sampling time point | Transcription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls |
1.3 | | AT5G51190 | 'arr22-ox' vs 'wild type' in 't-zeatin' | genotype, growth condition | Transcription profiling by array of Arabidopsis overexpressing arr22 after treatment with t-zeatin |
1.3 | | AT5G51190 | 'met1 mutant' vs 'wild type' at '0 hour' | genotype, time | Transcription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours |
-1.3 | | AT5G51190 | '60 minutes after cordycepin treatment' vs 'immediately after cordycepin treatment' in 'wild type genotype' | genotype, sampling time point | Transcription profiling by array of a stably RNAi-silenced nuclear 5’-3’ exonuclease XRN3 mutant line in Arabidopsis thaliana after transcriptional inhibition with cordycepin |
1.3 | | AT5G51190 | '50 micromolar abscisic acid' vs 'control' in 'srk2dei triple mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
1.3 | | AT5G51190 | 'pH 4.5' vs 'pH 6' at 1 hour | growth condition, time | Transcription profiling by array of Arabidopsis grown at low pH |
-1.3 | | AT5G51190 | 'indole-3-acetic acid; 1 hour' vs 'indole-3-acetic acid; 0.5 hour' in 'C24' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
-1.3 | | AT5G51190 | 'ethanol' at '1 hour' vs 'control' at '0 hour' | compound, time | Transcription profiling by array of Arabidopsis XW119 seedlings after induction with ethanol |
-1.3 | | AT5G51190 | 'WOX1-1' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
1.3 | | AT5G51190 | 'oxt6:AtCPSF30' vs 'wild type' | genotype | A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana |
-1.3 | | AT5G51190 | '35S::HA::RAP2.12' vs 'wild type' in 'aerobic' | genotype, growth condition | Transcription profiling by array of Arabidopsis overexpressing RAP2.12 or with RAP2.12 and RAP2.2 silenced after growth in hypoxic conditions |
1.3 | | AT5G51190 | 'RBRcs mutant' vs 'wild type' in 'sucrose; 1 percent' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for rbr1 after treatment with 1% sucrose |
1.3 | | AT5G51190 | 'csn4-1 mutant' vs 'wild type' in 'light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
1.3 | | AT5G51190 | 'NOG1 knockdown by siRNA' vs 'none' in 'wild type genotype' | RNA interference, genotype | Transcriptome profiling of knock mutant and RNAi lines for small GTPase, nucleolar GTP-binding protein 1 (NOG1) in Arabidopsis |
-1.3 | | AT5G51190 | 'bru1 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for bru1 |
-1.3 | | AT5G51190 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'gpa1-4 mutant; leaf' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
1.3 | | AT5G51190 | 'Pseudomonas syringae pv tomato DC3000(avrRpt2)' vs 'none' in 'gh3.5-1D heterozygous mutant' | genotype, infect | Transcription profiling by array of Arabidopsis heterozygous mutant for gh3.5 after inoculation with Pseudomonas syringae pv tomato DC3000(avrRpt2) against wild type counterparts and uninfected controls |
-1.3 | | AT5G51190 | 'sps1' vs 'wild type' | genotype | Expression data from 10-days old dark grown Arabidopsis seedlings of wild type (Col-0), sps1 line and L17 line. |
1.3 | | AT5G51190 | 'csn5 (csn5a-2 csn5b) mutant' vs 'wild type' in 'light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
1.3 | | AT5G51190 | 'Plectosphaerella cucumerina inoculation' vs 'control' in 'agb1-1 mutant' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina |
1.3 | | AT5G51190 | '3,5-dichloroanthranilic acid' vs 'none' in 'wild type' at '2 day' | compound, genotype, time | Transcription profiling by array of Arabidopsis mutant for npr1 after treatment with 3,5-dichloroanthranilic acid or 2,6-dichloroisonicotinic acid |
1.3 | | AT5G51190 | 'Phytophthora infestans' vs 'none' in 'erp2D mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
1.3 | | AT5G51190 | 'AGL15 overexpression' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for agl15 and agl18 or overexpressing AGL15 during somatic embryogenesis |
1.3 | | AT5G51190 | 'GO overexpression' vs 'wild type' in 'transferred to ambient CO2 concentration' at '8 hour' | genotype, growth condition, time | Transcription profiling by array of Arabidopsis catalase mutant and plants expressing glycolate oxidase in chloroplasts transferred to ambient CO2 concentration |
-1.3 | | AT5G51190 | 'Erysiphe orontii' vs 'none' at '48 hour' | infect, time | Transcription profiling by array of Arabidopsis after inoculation with Erysiphe orontii |
1.3 | | AT5G51190 | 'far-red light pulse followed by darkness' vs 'constant white light' in 'petiole' | growth condition, organism part | Transcription profiling by array of Arabidopsis subjected to far-red light pulse treatment |
-1.3 | | AT5G51190 | 'coi1-2 mutant' vs 'wild type genotype' in 'Sclerotinia sclerotiorum' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
1.2 | | AT5G51190 | 'csn3-1 mutant' vs 'wild type' in 'light' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for csn after growth in light and dark conditions |
1.2 | | AT5G51190 | 'Blumeria graminis f.sp. hordei' vs 'none' in 'wild type' | genotype, infect | Transcription profiling by array of Arabidopsis mutant for ataf1 after infection with Blumeria graminis f.sp. hordei |
-1.2 | | AT5G51190 | 'ga1 muant and SCL3 overexpression' vs 'ga1 mutant' | genotype | Arabidopsis thaliana roots at 7DAG; ga1, ga1 scl3 (LOF) and ga1 SCL3 OE (GOF) |
1.2 | | AT5G51190 | 'thaxtomin A treated' vs 'methanol treated (control)' | compound | Transcriptional profiling after inhibition of cellulose synthesis by thaxtomin and isoxaben in Arabidopsis thaliana suspension cells |
-1.2 | | AT5G51190 | 'pepr1-1 Pepr2-3; Pep2' at '2 hour' vs 'wild type; Pep2' at '2 hour' | genotype, time, treatment | Expression analysis of Arabidopsis ein2 and bak1 mutants treated with the elicitors elf18 and Pep2. |
-1.2 | | AT5G51190 | 'bri1-116 null mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for bzr1 and bri1 or bri1 only |
-1.2 | | AT5G51190 | 'srk2dei triple mutant' vs 'wild type' in '50 micromolar abscisic acid' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana wild type plants (Col-0) and srk2dei triple knockout mutant to investigate the functions of ABA-activated protein kinases, SRK2D/SnRK2.2, SRK2E/OST1 and SRK2I/SnRK2.3 |
1.2 | | AT5G51190 | 'Phytophthora infestans' vs 'none' in 'pen2 mutant' at '6 hour' | genotype, infect, time | Metabolic and transcriptional response of Arabidopsis thaliana wildtype and mutants to Phytophtora infestans |
-1.2 | | AT5G51190 | '3 percent glucose and 1 micromolar indole-3-acetic acid' vs 'none' | compound | Transcription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions |
-1.2 | | AT5G51190 | '3 percent glucose' vs 'none' | compound | Transcription profiling of Arabidopsis seedlings treated with glucose and indole-3-acetic acid (auxin) to study glucose-auxin interactions |
1.2 | | AT5G51190 | 'bleomycin' vs 'none' | stimulus | Transcription profiling by array of Arabidopsis seedlings grown after DNA-damaging agent bleomycin (BLM) and/or immune inducer 2, 6-dichloroisonicotinic acid (INA) treatment to identify synergistically induced defence genes |
-1.2 | | AT5G51190 | 'bri1-5/bri1-1D' vs 'wild type' | genotype | Genome-wide expression analysis of bri1-5 and its suppressors brs1-1D, bak1-1D, bri1-1D |
1.2 | | AT5G51190 | 'agl15-4; agl18-1 double mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for agl15 and agl18 or overexpressing AGL15 during somatic embryogenesis |
1.2 | | AT5G51190 | 'polysome-bound RNA; 0.5 hour; white light' vs'polysome-bound RNA; dark' | RNA, time, treatment | Transcription profiling by array of Arabidopsis seedlings treated with white light |
-1.2 | | AT5G51190 | '0.1 mM nitrate' vs '10 mM nitrate' in 'wild type genotype' | genotype, growth condition | Transcriptional profiling of Arabidopsis constitutively expressing Medicago truncatula NRT1 PTR FAMILY 1.7 |
-1.2 | | AT5G51190 | 'Constans mutant' vs 'wild type' | genotype | HAP5 Triple Mutant vs. Constans Mutant |
1.2 | | AT5G51190 | '4 days salt treatment' vs 'control' | growth condition | Transcription profiling by array of Arabidopsis leaves under the condition of salt-induced senescence |
1.2 | | AT5G51190 | 'sav1-1' vs 'wild type' in 'simulated shade for 1 hour' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for sav after an hour of simulated shade. |
1.2 | | AT5G51190 | 'iron; 100 micromolar' vs 'none' in 'bhlh100/101 double mutant; shoot' | compound, genotype, organism part | Expression data from Arabidopsis roots and shoots grown with or without iron |
-1.2 | | AT5G51190 | 'paclobutrazol; 20 micromolar' vs 'none' in 'endosperm' | compound, organism part | Transcription profiling by array of Arabidopsis whole embryos and endosperm after treatment with abscisic acid or paclobutrazol |
-1.2 | | AT5G51190 | 'sodium chloride; 120 millimolar' vs 'control; 0 millimolar' in 'wild type' at '24 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis rsa1-1 mutants under salt stress |
1.2 | | AT5G51190 | 'arf7 arf19 double mutant' vs 'wild type' in 'Root Lateral Root Emergence Zone' | genotype, organism part | Transcription profiling by array of different organism parts of Arabidopsis mutant for arf7 and arf19 |
-1.2 | | AT5G51190 | 'nph4-1 mutant' vs 'wild type' in 'no compound' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for arf19, arf2, axr3, iaa5, iaa6, iaa19, iaa17 or nph4 after treatment with indole-3-acetic acid |
1.2 | | AT5G51190 | 'indole-3-acetic acid and 4-thiazolidione appended with derivatized acetic acid' vs 'none' | growth condition | Transcription profiling by array of Arabidopsis after treatment with inhibitors of auxin transcriptional activation |
1.2 | | AT5G51190 | '4-thiazolidione appended with derivatized acetic acid' vs 'none' | growth condition | Transcription profiling by array of Arabidopsis after treatment with inhibitors of auxin transcriptional activation |
1.2 | | AT5G51190 | 'oligomycin' vs 'control' at '1 hour' | growth condition, time | Effect of oligomycin on transcript levels in Arabidopsis seedling cultures |
-1.1 | | AT5G51190 | 'water; des1' vs 'water; wild type' | compound, genotype | Exogenous Sulfide Reverses the Alteration of Transcriptional Profiling of the des1-1 Mutant (Arabidopsis thaliana) |
1.1 | | AT5G51190 | 'DEWAX2 overexpression' vs 'wild type genotype' | genotype | Transcription profiling by array of Arabidopsis thaliana columbia and DEWAX2 overexpression plants line stems |
1.1 | | AT5G51190 | '30 minute' vs '0 minute' in 'indole-3-acetic acid; wild type; root meristem' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
1.1 | | AT5G51190 | 'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '48 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
-1.1 | | AT5G51190 | 'bri1-5/brs1-1D' vs 'wild type' | genotype | Genome-wide expression analysis of bri1-5 and its suppressors brs1-1D, bak1-1D, bri1-1D |
-1.1 | | AT5G51190 | 'bri1-116 null mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis overexpressing AtGATA2 or mutant for bri1 |
1.1 | | AT5G51190 | '4.5 micromolar Naphtalenacetic acid and 50 micromolar antimycin A' vs 'none' | treatment | Expression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue |
1.1 | | AT5G51190 | 'ron1-1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for ron1 |
-1.1 | | AT5G51190 | 'WOX1-2' vs 'wild type' | genotype | Transcriptome analysis in flavonoid overaccumulating and lacking Arabidopsis. |
1.1 | | AT5G51190 | 'HrpZ 10uM' vs 'water' at '1 hour' | growth condition, time | Transcription profiling by array of Arabidopsis after treatment with LPS, HrpZ, Flg-22 and NPP1 |
-1.1 | | AT5G51190 | 'ethanol' at '2 hour' vs 'control' at '0 hour' | compound, time | Transcription profiling by array of Arabidopsis XW119 seedlings after induction with ethanol |
1.1 | | AT5G51190 | 'met1 mutant' vs 'wild type' at '4 hour' | genotype, time | Transcription profiling by array of arabidopsis wild type and met1 mutant calli cultured on shoot induction medium for 0, 4 and 6 hours |
-1.1 | | AT5G51190 | 'sodium chloride; 120 millimolar' vs 'control; 0 millimolar' in 'rsa1-1 mutant' at '24 hour' | compound, genotype, time | Transcription profiling by array of Arabidopsis rsa1-1 mutants under salt stress |
1.1 | | AT5G51190 | 'Sclerotinia sclerotiorum' vs 'none' in 'wild type genotype' at '24 hour' | genotype, infect, time | Transcription profiling by array of Arabidopsis mutant for coi1 after infection with Sclerotinia sclerotiorum |
1.1 | | AT5G51190 | 'lug-3 mutant' vs 'wild type' in 'flower' | genotype, organism part | Transcription profiling by array of Arabidopsis lug-3 mutant plants |
1.1 | | AT5G51190 | 'oligomycin' vs 'control' at '4 hour' | growth condition, time | Effect of oligomycin on transcript levels in Arabidopsis seedling cultures |
1.1 | | AT5G51190 | 'tor mutant' vs 'wild type' in 'glucose; 15 micromolar' | compound, genotype | Transcription profiling by array of Arabidopsis estradiol inducible RNAi-tor seedlings treated with glucose |
1.1 | | AT5G51190 | 'LBD38 overexpression' vs 'wild type' in 'nitrogen depletion' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for or overexpressing LBD37 and LBD38 after nitrogen deprivation |
-1.1 | | AT5G51190 | 'dorn1-1 mutant' vs 'wild type' in '100 micromolar ATP' | genotype, growth condition | ATP effect on Arabidopsis roots |
1.1 | | AT5G51190 | '100 micromolar ATP' vs 'control' in 'wild type' | genotype, growth condition | ATP effect on Arabidopsis roots |
-1.1 | | AT5G51190 | '50 micromolar; abscisic acid' vs 'control (ethanol vehicle)' in 'agb1-2 mutant; leaf' | compound, genotype, organism part | Transcription profiling by array of Arabidopsis mutant for agb1 and/or gpa1 after treatment with abscisic acid |
-1.1 | | AT5G51190 | 'psad1-1 stn7-1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for psae1, psad1 or stn7, or double mutant for psae1 and stn7 or psad1 and stn7 |
1.1 | | AT5G51190 | '60 minute' vs '0 minute' in 'indole-3-acetic acid; arf7, arf19 double knockout; primary root elongation zone' | compound, genotype, organism part, time | Transcription profiling by array of Arabidopsis root tips from arf7, arf19 double mutant and wild type plants in response to auxin |
1.1 | | AT5G51190 | 'Rhizoctonia solani AG8' vs 'mock' | infect | Expression data in whole Arabidopsis seedlings after treatment with Rhizoctonia solani AG8 and AG2-1 |
1.1 | | AT5G51190 | 'pvip1; pvip2 mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for pvip1 and pvip2 |
1 | | AT5G51190 | 'TaRZ1 overexpressing line' vs 'wild type' | genotype | Gene expression profile in wheat TaRZ1-expressing Arabidopsis plant |
1 | | AT5G51190 | 'vtc1' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis mutant for vtc1 or abi4 |
-1 | | AT5G51190 | 'dexamethasone; 10 micromolar' vs 'none' in 'dark' | compound, growth condition | Expression data from Arabidopsis thaliana under dark and far-red light |
1 | | AT5G51190 | 'ahk2/ahk3/ahk4 triple mutant' vs 'wild type' | genotype | Transcription profiling by array of Arabidopsis ahk mutants |
1 | | AT5G51190 | 'indole-3-acetic acid' vs 'none' in 'arf19-1' | compound, genotype | Transcription profiling by array of Arabidopsis mutant for nph4 or arf19 or both after treatment with indole-3-acetic acid |
-1 | | AT5G51190 | 'indole-3-acetic acid; 1 hour' vs 'indole-3-acetic acid; 0.5 hour' in 'Fei-0' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
-1 | | AT5G51190 | 'indole-3-acetic acid; 1 hour' vs 'indole-3-acetic acid; 0.5 hour' in 'Sha' | compound, ecotype, time | Transcription profiling by array of Arabidopsis Col-0, Fei-0, Bur-0, C24, Sha, Bay-0 and Bl-1 after treatment with indole-3-acetic acid |
-1 | | AT5G51190 | 'cs26 mutant' vs 'wild type' in 'short day photoperiod' | genotype, growth condition | Transcription profiling by array of Arabidopsis thaliana leaves after long or short photoperiods |
1 | | AT5G51190 | 'steady-state RNA; 0.5 hour; white light' vs'steady-state RNA; dark' | RNA, time, treatment | Transcription profiling by array of Arabidopsis seedlings treated with white light |
-1 | | AT5G51190 | '500 micromolar; phosphate' vs 'none' in 'split root' | compound, growth condition | Transcription profiling by array of Arabidopsis roots grown with different concentrations of phosphate |
-1 | | AT5G51190 | 'wnk8-3 mutant' vs 'wild type' | genotype | Expression data from 2-week-old Arabidopsis untreated seedlings grown under a short day condition |
1 | | AT5G51190 | 'LBD37 knockout' vs 'wild type' in 'full nitrogen' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for or overexpressing LBD37 and LBD38 after nitrogen deprivation |
-1 | | AT5G51190 | 'wnk8-1 mutant' vs 'wild type' | genotype | Expression data from 2-week-old Arabidopsis untreated seedlings grown under a short day condition |
1 | | AT5G51190 | 'MtNPF1.7 expression' vs 'wild type genotype' in '0.1 mM nitrate' | genotype, growth condition | Transcriptional profiling of Arabidopsis constitutively expressing Medicago truncatula NRT1 PTR FAMILY 1.7 |
1 | | AT5G51190 | 'oxt6 mutant' vs 'wild type' | genotype | A polyadenylation factor subunit implicated in regulating oxidative stress responses in Arabidopsis thaliana |
1 | | AT5G51190 | 'arf7 arf19 double mutant' vs 'wild type' in 'Root Decelerating Elongation Zone' | genotype, organism part | Transcription profiling by array of different organism parts of Arabidopsis mutant for arf7 and arf19 |
1 | | AT5G51190 | 'Heterodera schachtii' vs 'none' | infect | Transcription profiling by array of Arabidopsis roots infected with the cyst nematode H. schachtii |
-1 | | AT5G51190 | 'mock inoculation' vs 'control' in 'wild type' | genotype, growth condition | Transcription profiling by array of Arabidopsis mutant for agb1 after infection with Plectosphaerella cucumerina |