ENSSSCG00000006418

sus scrofa

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Sus scrofa
Organism part
Showing 70 experiments:
image/svg+xml human body features 2009-05-27 Sjef text : Kevin (tsaitgaist) REDON http://commons.wikimedia.org/wiki/File:Human_body_features.svg cerebral cortex pleura brain heart breast thyroid gland adrenal gland lymph node bone marrow adipose tissue skeletal muscle leukocyte frontal cortex temporal lobe prefrontal cortex pituitary gland atrial appendage aorta coronary artery gastroesophageal junction left ventricle hippocampus hippocampus caecum ileum rectum nose tongue left atrium pulmonary valve mitral valve penis vas deferens seminal vesicle testis epididymis eye nasal septum oral cavity tonsil nasal pharynx lung spinal cord amygdala trachea throat bronchus tricuspid valve diaphragm liver stomach spleen duodenum gall bladder pancreas colon small intestine appendix smooth muscle urinary bladder prostate gland nerve cerebellum cerebellar hemisphere kidney renal cortex bone cartilage esophagus salivary gland parotid gland submandibular gland skin
Created with Highcharts 6.2.0adiposediaphragmhypothalamusolfactory apparatussigmoid colonurinary bladderaortabasal ganglionbreastcerebral cortexdura materesophagusfrontal cortexheart left ventricleleft kidneylower leg skinmiddle frontal gyrusmuscle of legparotid glandponspulmonary veinright cardiac atriumsmooth muscle tissuesubmandibular glandtestistibial nervevisual cortex
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68 FANTOM5 project - adult
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GTEX - organism part
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32 Uhlen's Lab
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Hallstrom et al., 2014 - Organism part
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68 FANTOM5 project - fetal
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19 NIH Epigenomics Roadmap
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Illumina Body Map
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HDBR developing brain - 9 post …
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HDBR developing brain - Carnegie Stage …
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ENCODE (M. Snyder lab)
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HDBR developing brain - Late 8 post …
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Mammalian Kaessmann
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Zhu et al., 2018 - Organism part
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HDBR developing brain - 15 post …
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Human Protein Atlas
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Human2021_Tissues - Wang et al. 2019
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Human Proteome Map - adult
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Doll et al., 2017 - Organism part
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McKetney et al., 2019 – organism part …
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brain regions
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Human Proteome Map - fetus
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ovary, pancreas, liver, subst. nigra
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Linscheid et al., 2020 – Tissues - …
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cerebellum and occipital lobe
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Proteomics
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Transcriptomics
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
1.4777 × 10-22.1
ENSSSCG00000006418'anterior cruciate ligament transection surgery; 28 day; ligament reconstruction surgery' vs 'no injury; no treatment' in 'male'injury, sex, time, treatmentTranscriptional profiling of articular cartilage in a porcine model of early post-traumatic osteoarthritis
Adjusted p-valueLog2-fold change
1.8214 × 10-112
ENSSSCG00000006418'lipopolysaccharide; 2 hour' vs 'none; 0 hour' in 'high residual feed intake'phenotype, stimulus, timeRNA-seq of porcine peripheral whole blood from pig divergently selected for residual feed intake and treated with lipopolysaccharide
Adjusted p-valueLog2-fold change
5.0499 × 10-42
ENSSSCG00000006418'anterior cruciate ligament transection surgery; 28 day; no treatment' vs 'no injury; no treatment' in 'male'injury, sex, time, treatmentTranscriptional profiling of articular cartilage in a porcine model of early post-traumatic osteoarthritis
Adjusted p-valueLog2-fold change
7.8237 × 10-32
ENSSSCG00000006418'anterior cruciate ligament transection surgery; 28 day; no treatment' vs 'no injury; no treatment' in 'female'injury, sex, time, treatmentTranscriptional profiling of articular cartilage in a porcine model of early post-traumatic osteoarthritis
Adjusted p-valueLog2-fold change
1.2086 × 10-41.9
ENSSSCG00000006418'anterior cruciate ligament transection surgery; 28 day; ligament repair surgery (BEAR)' vs 'no injury; no treatment' in 'male'injury, sex, time, treatmentTranscriptional profiling of articular cartilage in a porcine model of early post-traumatic osteoarthritis
Adjusted p-valueLog2-fold change
1.1656 × 10-21.8
ENSSSCG00000006418'anterior cruciate ligament transection surgery; 28 day; ligament repair surgery (BEAR)' vs 'no injury; no treatment' in 'female'injury, sex, time, treatmentTranscriptional profiling of articular cartilage in a porcine model of early post-traumatic osteoarthritis
Adjusted p-valueLog2-fold change
5.2792 × 10-91.7
ENSSSCG00000006418'lipopolysaccharide; 2 hour' vs 'none; 0 hour' in 'low residual feed intake'phenotype, stimulus, timeRNA-seq of porcine peripheral whole blood from pig divergently selected for residual feed intake and treated with lipopolysaccharide
Adjusted p-valueLog2-fold change
7.6062 × 10-51.3
ENSSSCG00000006418'dsRNA poly(I:C); 0.5 milligram per kilogram' vs 'none' in 'large decrease in lymphocytes count'clinical information, compoundA transcriptomic landscape for total lymphocyte count in the poly I:C-induced porcine periphery
Adjusted p-valueLog2-fold change
1.5091 × 10-6-1.2
ENSSSCG00000006418'high residual feed intake' vs 'low residual feed intake' in 'skeletal muscle tissue'organism part, phenotypeA comparative analysis of the transcriptome profiles of liver and muscle tissue in pigs divergent for feed efficiency
Adjusted p-valueLog2-fold change
1.1446 × 10-2-1
ENSSSCG00000006418'ampicillin, gentamycin, metronidazol' vs 'none' in 'ileum'compound, organism partNeonatal antibotic prophylaxis modulates intestinal immunity and prevents necrotizing enterocolitis in preterm neonates