ensmusg00000021716 (Srek1ip1)

mus musculus

splicing regulatory glutamine/lysine-rich protein 1interacting protein 1

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Mus musculus
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Showing 43 experiments:
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Created with Highcharts 6.2.0adrenal glandcerebellumduodenumhippocampal formationmaxillary archolfactory pitspleenvesicular glandbone (os femoris)brown adipose tissuecorpus striatumdiaphragmepididymis and seminiferous tubuleforelimbintestinal mucosalateral prominence neural epitheliummesodermnon-floor plate neural epitheliumpreoptic areaskeletal musclesubventricular zonetracheazone of skin
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49 FANTOM5 project - adult
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9 in 3 strains - CD1
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49 FANTOM5 project - neonate
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9 in 3 strains - DBA/2J
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49 FANTOM5 project - juvenile
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49 FANTOM5 project - embryonic day 14
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Mammalian Kaessmann
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9 in 3 strains - C57BL/6
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Gregg et al - CAST/EiJ
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Gregg et al - (CAST/EiJ X C57BL/6J)F1
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Gregg et al - (C57BL/6J X CAST/EiJ)F1
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4 Bonthuis et al - (CastEiJ X …
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Mernberger et al 2019 - Organism Part
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49 FANTOM5 project - embryonic day 18
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4 Bonthuis et al - CastEiJ
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4 Bonthuis et al - C57BL/6J
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Organism part - Geiger et al
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Meierhofer et al., 2016 - organism part
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2.1
Display log2-fold change
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Log2-fold changeSpeciesGene nameComparisonExperimental variablesExperiment name
Adjusted p-valueLog2-fold change
4.4541 × 10-72.1
Srek1ip1'TRIM28(flox/flox):Mx1Cre' vs 'TRIM28(flox/flox)' in 'CD71(hi)TER119-'genotype, phenotypeTranscription profiling by high throughput sequencing of bone marrow immature erythroid cells from Trim28flox/flox:TgMx1Cre congenic mice
Adjusted p-valueLog2-fold change
1.8289 × 10-10-2
Srek1ip1'myeloid lineage restricted progenitor cell' vs 'long term hematopoietic stem cell' in 'Elp3fl/fl'cell type, genotypeRNA-seq of long-term hematopoietic stem cells and myeloid progenitors of control mice or mice conditionally deficient for Trp53 or Elp3 or both genes in the hematopoietic system
Adjusted p-valueLog2-fold change
1.3707 × 10-31.9
Srek1ip1'TRIM28(flox/flox):Mx1Cre' vs 'TRIM28(flox/flox)' in 'CD71(hi)TER119+'genotype, phenotypeTranscription profiling by high throughput sequencing of bone marrow immature erythroid cells from Trim28flox/flox:TgMx1Cre congenic mice
Adjusted p-valueLog2-fold change
8.2565 × 10-3-1.8
Srek1ip1'subventicular zone of the lateral ventricle' vs 'cerebellum'organism partExpression data from adult Shh-responding astroglia cells in mice
Adjusted p-valueLog2-fold change
7.4787 × 10-101.5
Srek1ip1'reduced expression of miR-25' vs 'wild type'phenotypeTranscription profiling by high throughput sequencing of wild type and miR-25 agomir or antagomir treated mice
Adjusted p-valueLog2-fold change
3.4256 × 10-16-1.4
Srek1ip1'germ free C57BL/6' vs 'specific pathogen free C57BL/6' in 'wild type genotype'genotype, strainRNA sequencing of primary isolated unstimulated murine splenic cDC from specific pathogen free (SPF), Germ Free (GF) and Interferon alpha/beta receptor 1 (Ifnar) knock out mice.
Adjusted p-valueLog2-fold change
2.6752 × 10-38-1.3
Srek1ip1'pabpn1l -/-' vs 'wild type genotype' in 'zygote'genotype, organism partRNA-seq of oocytes and zygotes from pabpn1l ko and wt female mice
Adjusted p-valueLog2-fold change
7.6723 × 10-38-1.3
Srek1ip1'neuron' vs 'differentiating progenitor'cell typeTranscription profiling by high throughput sequencing of proliferating neural stem cells, differentiating neurogenic progenitors and newborn neurons using a dual-reporter mouse line
Adjusted p-valueLog2-fold change
5.8359 × 10-5-1.2
Srek1ip1'p150 subunit of CAF-1 siRNA knockdown' vs 'scrambled siRNA'RNA interferenceRNA-seq of control siRNA, p150 siRNA and p60 siRNA transfected mES cells
Adjusted p-valueLog2-fold change
5.5771 × 10-31.2
Srek1ip1'lung carcinoma' vs 'normal' in 'CD11b+Ly6G+ neutrophil'cell type, diseaseTranscriptome analysis of isolated stormal cells and tumor epithelial cells in mouse lung cancer by RNA-Seq
Adjusted p-valueLog2-fold change
1.4895 × 10-21.2
Srek1ip1'extraembryonic endoderm stem cell; grown in ES cell medium' vs 'mouse embryonic fibroblast; control'cell type, growth conditionOSKM induce extraembryonic endoderm stem (iXEN) cells in parallel to iPS cells
Adjusted p-valueLog2-fold change
3.5991 × 10-21.2
Srek1ip1'PS2APP transgenic' vs 'non transgenic' in 'neuron' at '13 month'age, cell type, genotypeTranscription profiling by high throughput sequencing of astrocytes, microglial and neuronal cells from an Alzheimer's mouse model
Adjusted p-valueLog2-fold change
3.84 × 10-41.1
Srek1ip1'acute graft vs. host disease; T-cell depleted bone marrow + T cells transplant' vs 'normal; T-cell depleted bone marrow transplant'disease, stimulusRNA-Seq of lymph node fibroblastic reticular cells isolated from bone marrow transplant recipient mice with or without acute Graft-versus-host disease on day 7 or untransplanted control mice
Adjusted p-valueLog2-fold change
2.5264 × 10-3-1.1
Srek1ip1'p60 subunit of CAF-1 siRNA knockdown' vs 'scrambled siRNA'RNA interferenceRNA-seq of control siRNA, p150 siRNA and p60 siRNA transfected mES cells
Adjusted p-valueLog2-fold change
1.3916 × 10-2-1.1
Srek1ip1'postnatal 2-3 month; hindlimb' vs 'embryonic day 17.5; whole forelimb and hindlimb'age, organism partExpression data from skeletal muscle satellite cells at different development stages
Adjusted p-valueLog2-fold change
4.4473 × 10-10-1
Srek1ip1'Ifnar1 knockout' vs 'wild type genotype' in 'specific pathogen free C57BL/6'genotype, strainRNA sequencing of primary isolated unstimulated murine splenic cDC from specific pathogen free (SPF), Germ Free (GF) and Interferon alpha/beta receptor 1 (Ifnar) knock out mice.
Adjusted p-valueLog2-fold change
1.0108 × 10-7-1
Srek1ip1'tape stripping and oral administration of winged bean extract' vs 'tape stripping'treatmentTranscription profiling by array of mouse dorsal skin after tape stripping and treatment with winged bean extract.
Adjusted p-valueLog2-fold change
5.5646 × 10-41
Srek1ip1'high fat diet' vs 'chow diet' in 'SHP knockout'genotype, growth conditionTranscription profiling of small heterodimer partner deficiency (SHP) knockout mice heart
Adjusted p-valueLog2-fold change
1.5855 × 10-31
Srek1ip1'pkd1 knockout' vs 'wild type' in 'presence of fluid flow'genotype, stimulusTranscription profiling by array of mouse kidney epithelial cells from pkd1 knockout and wild type in response to fluid flow
Synonym
3110031B13Rik, Sfrs12ip1, Srsf12ip1
Ortholog
Gene ontology
InterPro
Ensembl gene
Ensembl transcript
Ensembl protein
Entrez
UniProt
MGI ID (Mouse)
MGI description
Gene biotype
Design element
5417016, A_51_P300297, 4599359, 4916648, 5338831, 111794_at, 1435696_s_at, 5407983, 10407012, 4473088, 4475364, 5057711, 110969_at, 4777022, A_52_P203981, 17289635, 4655006, 113626_at, 4725046, 1420507_a_at, ILMN_2652085, ILMN_1223254, 4768411