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EBI-760432 |
Interaction Details
Accession
EBI-760432Type
Detection Method
Host Organism
Saccharomyces cerevisiae (Baker's yeast)Positive Interaction
✔️Annotations (5)
Topic | Description |
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supplementary Table S2 | |
Annotation to indicate that this entry has been checked and accepted by a senior curator. | |
All ORFs from the human ORFeome v1.1 (~8,100 ORFs equivalent to ~7200 unique genes) were transfered into DB and AD vectors. Total of 11,210 DB ISTs were crossed against 11,194 AD ISTs to obtain 10,597 Y2H ISTs. This corresponded to 3,703 non-redundant interactions of which 2,754 were high confidence interactions. | |
imex curation | |
1) The MGC identifiers provided by authors were used to parse the UniProtKB records to obtain UniProtKB identifiers. 2) The genes that could not be identified were then subject to parsing the gene name and description line of UniProtKB entries using the gene symbol. 3) The sequences for the genes which could not be assigned a UniProtKB identifier were then matched against the entire UniProtKB. 197 clones from the entire ORF could not be mapped using UniProtKB identifiers. Of a total of 2755 interactions 2671 interactions could be mapped using UniProtKB identifiers. |
Publication
Title
Towards a proteome-scale map of the human protein-protein interaction network.Journal
Nature (0028-0836)Authors
Rual J.F.,Venkatesan K.,Hao T.,Hirozane-Kishikawa T.,Dricot A.,Li N.,Berriz G.F.,Gibbons F.D.,Dreze M.,Ayivi-Guedehoussou N.,Klitgord N.,Simon C.,Boxem M.,Milstein S.,Rosenberg J.,Goldberg D.S.,Zhang L.V.,Wong S.L.,Franklin G.,Li S.,Albala J.S.,Lim J.,Fraughton C.,Llamosas E.,Cevik S.,Bex C.,Lamesch P.,Sikorski R.S.,Vandenhaute J.,Zoghbi H.Y.,Smolyar A.,Bosak S.,Sequerra R.,Doucette-Stamm L.,Cusick M.E.,Hill D.E.,Roth F.P.,Vidal M.Publication date
01/01/2005Publication reference
PubMed: 16189514External Cross References (1)
Database | Identifier |
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Annotations (2)
Topic | Description |
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This dataset has been named 'Human interactome dataset - co-AP' by the author. | |
marc_vidal@dfci.harvard.edu,fritz_roth@hms.harvard.edu,david_hill@dfci.harvard.edu |
Showing 1 to 2 of 2 entries
Expand | Name | AC | Type | Identifier | Aliases | Description | Species | Expression System | Detection Methods | Experimental Role | Biological Role | Experimental Preparations | Parameters | Confidences | Cross References | Annotations |
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Expand | Name | AC | Type | Identifier | Aliases | Description | Species | Expression System | Detection Methods | Experimental Role | Biological Role | Experimental Preparations | Parameters | Confidences | Cross References | Annotations |
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hgs_human | EBI-760434 | protein | Hepatocyte growth factor-regulated tyrosine kinase substrate | Homo sapiens | unspecified role | unspecified role | ||||||||||
ts101_human | EBI-760433 | protein | Tumor susceptibility gene 101 protein | Homo sapiens | unspecified role | unspecified role |
Showing 0 to 0 of 0 entries
AC | Name | Type | Role | Range Positions | Linked Features | Participant Name | Participant Identifier | Participant AC | Detection Methods | Parameters | Identifiers | Cross References | Annotations |
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AC | Name | Type | Role | Range Positions | Linked Features | Participant Name | Participant Identifier | Participant AC | Detection Methods | Parameters | Identifiers | Cross References | Annotations |
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No data available in table |