D
IPR005797

Cytochrome b/b6, N-terminal domain

InterPro entry
Short nameCyt_b/b6_N
Overlapping
homologous
superfamilies
 
domain relationships

Description

In the mitochondrion of eukaryotes and in aerobic prokaryotes, cytochrome b is a component of respiratory chain complex III (
1.10.2.2
) - also known as the bc1 complex or ubiquinol-cytochrome c reductase. In plant chloroplasts and cyanobacteria, there is a analogous protein, cytochrome b6, a component of the plastoquinone-plastocyanin reductase (
1.10.99.1
), also known as the b6f complex.

Cytochrome b/b6
[1, 2]
is an integral membrane protein of approximately 400 amino acid residues that probably has 8 transmembrane segments. In plants and cyanobacteria, cytochrome b6 consists of two subunits encoded by the petB and petD genes. The sequence of petB is colinear with the N-terminal part of mitochondrial cytochrome b, while petD corresponds to the C-terminal part. Cytochrome b/b6 non-covalently binds two haem groups, known as b562 and b566. Four conserved histidine residues are postulated to be the ligands of the iron atoms of these two haem groups.

Apart from regions around some of the histidine haem ligands, there are a few conserved regions in the sequence of b/b6. The best conserved of these regions includes an invariant P-E-W triplet which lies in the loop that separates the fifth and sixth transmembrane segments. It seems to be important for electron transfer at the ubiquinone redox site - called Qz or Qo (where o stands for outside) - located on the outer side of the membrane. This entry represents the N-terminal region of these proteins.

References

1.Evolutionary conservation of protein regions in the protonmotive cytochrome b and their possible roles in redox catalysis. Howell N. J. Mol. Evol. 29, 157-69, (1989). View articlePMID: 2509716

2.Mitochondrial cytochrome b: evolution and structure of the protein. Esposti MD, De Vries S, Crimi M, Ghelli A, Patarnello T, Meyer A. Biochim. Biophys. Acta 1143, 243-71, (1993). View articlePMID: 8329437

GO terms

Cross References

This website requires cookies, and the limited processing of your personal data in order to function. By using the site you are agreeing to this as outlined in our Privacy Notice and Terms of Use.