PS01246

Uncharacterized protein family UPF0003 signature

PROSITE patterns entry
Member databasePROSITE patterns
PROSITE patterns typeconserved site
Short nameUPF0003

Description

The following uncharacterized proteins have been shown [1] to share regions of similarities: - Escherichia coli protein aefA. - Escherichia coli hypothetical protein yggB. - Escherichia coli hypothetical protein yjeP and HI0195.1, the corresponding Haemophilus influenzae protein. - Escherichia coli hypothetical protein ynaI. - Bacillus subtilis hypothetical protein yhdY. - Helicobacter pylori hypothetical protein HP0415. - Synechocystis strain PCC 6803 hypothetical protein slr0639. - Archaeoglobus fulgidus hypothetical protein AF1546. - Methanococcus jannaschii hypothetical protein MJ0170. - Methanococcus jannaschii hypothetical protein MJ1143. The size of these proteins range from 30 to 120 Kd. They all contain a number of transmembrane regions. As a signature pattern, we selected the best conserved region which is located in and just after the last potential transmembrane region.
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