/ RELEASES

Dataset updates for September 2024

The latest dataset releases are available for sequence searching in our Sequence Similarity Search bioinformatics applications and Dbfetch.

Overview of the current biological databases

The current dataset composition as of 1st October 2024 are as shown below. Dataset composition can be browsed in the JD Data Statistics page.

Name Seq. Type No. Datasets No. Entries Last Updated
AFDB protein 1 214,684,312 28/07/2022 12:12:03
CDP nucleotide 1 200,030 27/06/2022 16:42:58
ChEMBL protein 1 14,321 05/09/2024 14:34:46
EMVec nucleotide 1 7,561 17/07/2024 04:59:53
ENA nucleotide 115 78,584,200 18/07/2024 19:50:37
ENA cds nucleotide 88 394,866,750 19/07/2024 17:34:29
ENA expcon nucleotide 1 43,043 17/07/2024 04:49:43
ENA ncr nucleotide 64 49,145,362 28/09/2024 02:11:28
ENA rrna nucleotide 38 4,340,725 23/08/2023 00:37:29
ENA spacer nucleotide 45 212,565 01/07/2023 02:49:57
Ens mixed 10,870 297,469,886 11/09/2024 16:15:30
EnsCovid mixed 4 26 31/12/2023 00:24:02
EnsGenomes mixed 167,173 365,466,580 10/06/2024 15:34:31
EPO protein 1 4,441,107 23/05/2023 17:05:48
HMMER3 protein 7 207,034 16/06/2022 10:42:07
IMGTHLAcds nucleotide 1 40,618 22/07/2024 11:21:13
IMGTHLAgen nucleotide 1 22,583 22/07/2024 11:21:11
IMGTHLApro protein 1 40,416 22/07/2024 11:21:13
IMGTLIGM nucleotide 1 246,842 22/07/2024 11:23:42
IntAct protein 1 124,556 19/09/2024 00:38:24
InterPro protein 1 45,899 30/07/2024 01:26:47
IPDKIRcds nucleotide 1 1,534 22/07/2024 11:21:13
IPDKIRgen nucleotide 1 880 22/07/2024 11:22:11
IPDKIRpro protein 1 1,387 22/07/2024 11:22:15
IPDMHCcds nucleotide 1 11,506 22/07/2024 11:20:11
IPDMHCgen nucleotide 1 3,008 22/07/2024 11:21:43
IPDMHCpro protein 1 11,506 22/07/2024 11:22:42
IPDNHKIRcds nucleotide 1 1,072 22/07/2024 11:22:11
IPDNHKIRgen nucleotide 1 13 22/07/2024 11:22:11
IPDNHKIRpro protein 1 1,072 22/07/2024 11:23:12
IPRMC protein 1 245,963,890 30/07/2024 12:07:26
IPRMC_UNIPARC protein 1 1 04/08/2024 01:51:21
JPO protein 1 6,565,074 27/09/2024 00:52:22
KIPO protein 1 2,087,869 27/09/2024 00:30:16
MP protein 1 1,228,767 22/07/2024 11:18:39
MPEP protein 1 1,228,278 22/07/2024 11:18:07
MPRO protein 1 5,098 22/07/2024 11:17:40
PANTHER protein 1 123,151 10/11/2023 01:10:31
Patent Equivalents protein 1 119,710 03/04/2023 14:31:12
PDB protein 1 812,286 26/09/2024 02:10:52
PDBaa protein 1 812,286 26/09/2024 02:10:15
PDBna nucleotide 1 51,740 26/09/2024 02:13:00
Pfam protein 1 21,979 26/06/2024 01:22:33
Rfam nucleotide 1 4,178 19/09/2024 01:03:21
TAXONOMY other 1 1 01/10/2024 00:29:36
TESTDB protein 1 3  
TreeFam protein 1 15,736 10/11/2023 00:48:42
UniParc protein 401 1,614,380,330 29/07/2024 09:54:03
UniProtKB protein 3 10,695,431 29/07/2024 09:43:57
UniProtKB Divisions protein 18 149,459,298 29/07/2024 11:40:27
UniRef protein 3 44,000,000 29/07/2024 11:40:47
UniVec nucleotide 1 6,111 24/08/2024 00:16:42
USPTO protein 1 9,733,759 12/07/2024 01:39:53
WormBase mixed 1,120 22,358,127 24/04/2024 15:23:51