PDBe < PISA < EMBL-EBI

PISA Interface List.

Session Map (id=853-H5-2N5)

Interfaces in PDB 6dyw crystal.
Space symmetry group: P 41 21 2. Resolution: 1.45 Å

CRYSTAL STRUCTURE OF HELICOBACTER PYLORI 5'-METHYLTHIOADENOSINE/S- ADENOSYL HOMOCYSTEINE NUCLEOSIDASE (MTAN) COMPLEXED WITH (3R,4S)-1- ((4-AMINO-5H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)METHYL)-4-(((3-(1-BENZYL- 1H-1,2,3-TRIAZOL-4-YL)PROPYL)THIO)METHYL)PYRROLIDIN-3-OL

Interfaces

##			Structure 1				×	Structure 2						interface area, Å²	ΔⁱG kcal/mol	ΔⁱG P-value	N_HB	N_SB	N_DS	CSS
Id	NN	«»	Range	ⁱN_at	ⁱN_res	Surface Å²	×	Range	Symmetry op-n	Sym.ID	ⁱN_at	ⁱN_res	Surface Å²	interface area, Å²	ΔⁱG kcal/mol	ΔⁱG P-value	N_HB	N_SB	N_DS	CSS
1	`1`		A	`171`	`43`	`10430`	`◊`	A	-y,-x,-z-1/2	`8_554`	`169`	`43`	`10430`	`1605.5`	`-28.5`	`0.019`	`12`	`2`	`0`	`1.000`
	`2`		B	`170`	`43`	`10587`	`◊`	B	-y-1,-x-1,-z-1/2	`8_444`	`166`	`42`	`10587`	`1603.0`	`-28.6`	`0.008`	`12`	`2`	`0`	`1.000`
	*Average:*													`1604.2`	`-28.6`	`0.013`	`12`	`2`	`0`	`1.000`
2	`3`		A	`49`	`14`	`10430`	`◊`	B	-y-1,-x,-z-1/2	`8_454`	`50`	`15`	`10587`	`486.5`	`-3.1`	`0.555`	`6`	`0`	`0`	`0.000`
3	`4`		[OS5]B:307	`25`	`1`	`754`	`◊`	B	x,y,z	`1_555`	`49`	`21`	`10587`	`326.2`	`2.9`	`0.491`	`3`	`0`	`0`	`0.000`
	`5`		[OS5]A:308	`26`	`1`	`754`	`◊`	A	x,y,z	`1_555`	`49`	`21`	`10430`	`322.4`	`2.6`	`0.488`	`3`	`0`	`0`	`0.000`
	*Average:*													`324.3`	`2.7`	`0.490`	`3`	`0`	`0`	`0.000`
4	`6`		A	`37`	`13`	`10430`	`◊`	B	-y-1/2,x+1/2,z+1/4	`3_455`	`32`	`8`	`10587`	`269.3`	`-4.3`	`0.224`	`1`	`0`	`0`	`0.000`
5	`7`		B	`29`	`10`	`10587`	`◊`	A	x,y,z	`1_555`	`30`	`9`	`10430`	`265.0`	`1.3`	`0.846`	`4`	`2`	`0`	`0.000`
6	`8`		[OS5]B:307	`16`	`1`	`754`	`f`	B	-y-1,-x-1,-z-1/2	`8_444`	`23`	`6`	`10587`	`166.5`	`-1.4`	`0.157`	`0`	`0`	`0`	`0.159`
7	`9`		[OS5]A:308	`15`	`1`	`754`	`f`	A	-y,-x,-z-1/2	`8_554`	`23`	`6`	`10430`	`162.9`	`-1.4`	`0.183`	`0`	`0`	`0`	`0.139`
8	`10`		B	`16`	`4`	`10587`	`◊`	A	x-1/2,-y-1/2,-z-1/4	`6_444`	`20`	`7`	`10430`	`146.8`	`-1.1`	`0.467`	`1`	`1`	`0`	`0.000`
9	`11`		A	`15`	`5`	`10430`	`x`	A	x-1/2,-y-1/2,-z-1/4	`6_444`	`14`	`5`	`10430`	`122.1`	`0.4`	`0.762`	`2`	`2`	`0`	`0.000`
10	`12`		[EDO]B:301	`4`	`1`	`184`	`◊`	B	x,y,z	`1_555`	`18`	`6`	`10587`	`114.4`	`3.5`	`0.482`	`5`	`0`	`0`	`0.000`
11	`13`		[EDO]A:306	`4`	`1`	`185`	`◊`	A	x,y,z	`1_555`	`19`	`6`	`10430`	`113.7`	`3.5`	`0.492`	`6`	`0`	`0`	`0.000`
12	`14`		[EDO]B:304	`4`	`1`	`183`	`f`	B	x,y,z	`1_555`	`25`	`10`	`10587`	`106.9`	`3.3`	`0.473`	`1`	`0`	`0`	`0.000`
13	`15`		[EDO]A:303	`4`	`1`	`185`	`◊`	A	x,y,z	`1_555`	`18`	`7`	`10430`	`95.8`	`2.8`	`0.484`	`1`	`0`	`0`	`0.000`
14	`16`		B	`13`	`3`	`10587`	`◊`	A	-y-1,-x,-z-1/2	`8_454`	`12`	`4`	`10430`	`93.0`	`0.0`	`0.688`	`1`	`2`	`0`	`0.000`
15	`17`		[OS5]A:308	`10`	`1`	`754`	`◊`	B	x,y,z	`1_555`	`14`	`4`	`10587`	`89.0`	`0.2`	`0.391`	`0`	`0`	`0`	`0.000`
16	`18`		[EDO]A:307	`4`	`1`	`184`	`◊`	B	x,y,z	`1_555`	`14`	`4`	`10587`	`79.2`	`2.5`	`0.447`	`0`	`0`	`0`	`0.000`
17	`19`		[EDO]B:302	`4`	`1`	`185`	`◊`	B	x,y,z	`1_555`	`12`	`3`	`10587`	`76.0`	`2.2`	`0.290`	`0`	`0`	`0`	`0.000`
18	`20`		[EDO]B:303	`3`	`1`	`185`	`◊`	B	x,y,z	`1_555`	`13`	`4`	`10587`	`75.2`	`2.1`	`0.544`	`1`	`0`	`0`	`0.000`
19	`21`		[EDO]A:302	`4`	`1`	`182`	`◊`	A	x,y,z	`1_555`	`13`	`3`	`10430`	`71.1`	`2.6`	`0.297`	`0`	`0`	`0`	`0.000`
20	`22`		[EDO]A:305	`4`	`1`	`185`	`◊`	A	x,y,z	`1_555`	`10`	`4`	`10430`	`70.0`	`2.8`	`0.334`	`0`	`0`	`0`	`0.000`
21	`23`		[EDO]B:305	`4`	`1`	`184`	`◊`	B	x,y,z	`1_555`	`11`	`3`	`10587`	`66.6`	`1.4`	`0.257`	`1`	`0`	`0`	`0.000`
22	`24`		A	`10`	`3`	`10430`	`f`	[EDO]A:305	x-1/2,-y-1/2,-z-1/4	`6_444`	`4`	`1`	`185`	`63.0`	`1.6`	`0.771`	`0`	`0`	`0`	`0.000`
23	`25`		[EDO]A:304	`4`	`1`	`186`	`◊`	A	-y,-x,-z-1/2	`8_554`	`9`	`3`	`10430`	`60.5`	`1.7`	`0.773`	`0`	`0`	`0`	`0.000`
24	`26`		[EDO]B:305	`4`	`1`	`184`	`f`	A	x,y,z	`1_555`	`9`	`5`	`10430`	`58.9`	`1.2`	`0.785`	`1`	`0`	`0`	`0.000`
25	`27`		[EDO]A:304	`3`	`1`	`186`	`◊`	A	x,y,z	`1_555`	`9`	`3`	`10430`	`56.9`	`1.4`	`0.279`	`1`	`0`	`0`	`0.000`
26	`28`		[EDO]A:301	`4`	`1`	`183`	`f`	A	x,y,z	`1_555`	`9`	`4`	`10430`	`54.7`	`0.9`	`0.820`	`3`	`0`	`0`	`0.042`
27	`29`		[NH4]B:306	`1`	`1`	`117`	`x`	B	x,y,z	`1_555`	`8`	`4`	`10587`	`50.6`	`0.8`	`0.778`	`0`	`0`	`0`	`0.000`
28	`30`		B	`6`	`2`	`10587`	`◊`	A	-y,-x,-z-1/2	`8_554`	`9`	`5`	`10430`	`49.1`	`-0.8`	`0.416`	`0`	`0`	`0`	`0.000`
29	`31`		B	`8`	`2`	`10587`	`x`	B	-x-1/2,y-1/2,-z-3/4	`5_444`	`6`	`2`	`10587`	`47.6`	`-0.1`	`0.576`	`0`	`1`	`0`	`0.000`
30	`32`		[EDO]A:302	`4`	`1`	`182`	`f`	[EDO]A:302	-y,-x,-z-1/2	`8_554`	`4`	`1`	`182`	`46.4`	`1.5`	`1.000`	`2`	`0`	`0`	`0.000`
31	`33`		[EDO]B:302	`3`	`1`	`185`	`◊`	[EDO]B:302	-y-1,-x-1,-z-1/2	`8_444`	`3`	`1`	`185`	`45.8`	`1.9`	`1.000`	`0`	`0`	`0`	`0.000`
32	`34`		[OS5]A:308	`7`	`1`	`754`	`◊`	[EDO]B:305	x,y,z	`1_555`	`4`	`1`	`184`	`40.8`	`1.3`	`0.494`	`0`	`0`	`0`	`0.000`
33	`35`		[EDO]A:301	`3`	`1`	`183`	`◊`	[OS5]B:307	-y-1/2,x+1/2,z+1/4	`3_455`	`7`	`1`	`754`	`40.2`	`1.4`	`0.164`	`0`	`0`	`0`	`0.000`
34	`36`		[EDO]A:301	`3`	`1`	`183`	`◊`	B	-y-1/2,x+1/2,z+1/4	`3_455`	`3`	`1`	`10587`	`36.6`	`1.2`	`0.931`	`1`	`0`	`0`	`0.000`
35	`37`		B	`7`	`2`	`10587`	`◊`	[EDO]A:301	x-1/2,-y-1/2,-z-1/4	`6_444`	`2`	`1`	`183`	`33.8`	`0.8`	`0.467`	`0`	`0`	`0`	`0.000`
36	`38`		[EDO]A:303	`3`	`1`	`185`	`f`	A	-y,-x,-z-1/2	`8_554`	`6`	`2`	`10430`	`33.7`	`0.6`	`0.849`	`1`	`0`	`0`	`0.000`
37	`39`		[EDO]A:307	`4`	`1`	`184`	`f`	A	x,y,z	`1_555`	`7`	`3`	`10430`	`30.5`	`0.2`	`0.713`	`0`	`0`	`0`	`0.000`
38	`40`		[EDO]A:303	`2`	`1`	`185`	`◊`	[EDO]A:302	x,y,z	`1_555`	`2`	`1`	`182`	`24.8`	`1.1`	`1.000`	`0`	`0`	`0`	`0.000`
39	`41`		[EDO]B:302	`1`	`1`	`185`	`f`	B	-y-1,-x-1,-z-1/2	`8_444`	`4`	`2`	`10587`	`22.5`	`0.2`	`0.757`	`0`	`0`	`0`	`0.000`
40	`42`		[EDO]A:304	`1`	`1`	`186`	`f`	B	x,y,z	`1_555`	`2`	`1`	`10587`	`20.2`	`-0.0`	`0.495`	`0`	`0`	`0`	`0.005`
41	`43`		[EDO]A:302	`2`	`1`	`182`	`◊`	A	-y,-x,-z-1/2	`8_554`	`5`	`2`	`10430`	`19.1`	`0.3`	`0.799`	`0`	`0`	`0`	`0.000`
42	`44`		[EDO]B:301	`2`	`1`	`184`	`f`	B	-y-1,-x-1,-z-1/2	`8_444`	`1`	`1`	`10587`	`16.1`	`0.7`	`0.937`	`0`	`0`	`0`	`0.000`
43	`45`		[EDO]A:306	`2`	`1`	`185`	`f`	A	-y,-x,-z-1/2	`8_554`	`1`	`1`	`10430`	`15.2`	`0.7`	`0.937`	`0`	`0`	`0`	`0.000`
44	`46`		A	`1`	`1`	`10430`	`f`	[EDO]B:303	-y-1,-x,-z-1/2	`8_454`	`2`	`1`	`185`	`7.1`	`0.1`	`0.530`	`0`	`0`	`0`	`0.000`

PDBe PISA v1.52 [20/10/2014]

Protein Data Bank
in Europe

Bringing Structure to Biology

PDBePISA

Protein Data Bank in Europe

Bringing Structure to Biology

PDBePISA

Protein Data Bank
in Europe