Uber-anatomy ontology
Version 2024-11-25
Uberon is an integrated cross-species anatomy ontology representing a variety of entities classified according to traditional anatomical criteria such as structure, function and developmental lineage. The ontology includes comprehensive relationships to taxon-specific anatomical ontologies, allowing integration of functional, phenotype and expression data.
Ontology Information
Ontology IRI: http://purl.obolibrary.org/obo/uberon.owl
Last loaded: Sat Jan 04 15:22:43 GMT 2025
bug database
Contributor
- https://github.com/orgs/pato-ontology/teams/pato-community
- Mark Engelstad
- Bard, Jonathan
- David P Hill
- Sarah Whitcher Kansa
- Sereno, Paul
- Foulger, Rebecca
- Hilmar Lapp
- Alexander D Diehl
- Paula Duek Roggli
- Terry Hayamizu
- Stephen D Van Hooser
- Robert Druzinsky
- Alan Ruttenberg
- James Malone
- Georgios V. Gkoutos
- Ceri E Van Slyke
- Robinson-Rechavi, Marc
- Maglia, Anne
- Carlo Tornial
- Paul N. Schofield
- Anna V. Anagnostopoulos
- David Osumi-Sutherland
- Maryann E. Martone
- Mabee, Paula
- James P. Balhoff
- Frederic B Bastian
- Lane, Lydie
- Yvonne Bradford
- Terrence F Meehan
- Mejino, Jose Leonardo
- Shahim Essaid
- Cynthia L Smith
- Charles Tapley Hoyt
- https://www.wikidata.org/wiki/Q11695472
- https://www.wikidata.org/wiki/Q23809253
- https://www.wikidata.org/wiki/Q4964264
- https://www.wikidata.org/wiki/Q54985720
- https://www.wikidata.org/wiki/Q6983890
- https://www.wikidata.org/wiki/Q7650732
- https://www.wikidata.org/wiki/Q85793053
Creator
default-namespace
uberon
Description
Uberon is an integrated cross-species anatomy ontology representing a variety of entities classified according to traditional anatomical criteria such as structure, function and developmental lineage. The ontology includes comprehensive relationships to taxon-specific anatomical ontologies, allowing integration of functional, phenotype and expression data.
Git repository
has_obo_format_version
1.2
homepage
Publisher
Source
- aggregates AAO from 13:04:2012
- aggregates TAO from 09:08:2012
- aggregates VSAO from 16:07:2012
- http://braininfo.rprc.washington.edu/
- http://dbpedia.org
- http://en.wikipedia.org/wiki/
- http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-GrossAnatomy.owl
- http://palaeos.com
- http://pons.incf.org/wiki/Common_Upper_Mammalian_Brain_Ontology_%28Cumbo%29
- http://purl.obolibrary.org/obo/aao.owl
- http://purl.obolibrary.org/obo/aba.owl
- http://purl.obolibrary.org/obo/aeo.owl
- http://purl.obolibrary.org/obo/bila.owl
- http://purl.obolibrary.org/obo/bto.owl
- http://purl.obolibrary.org/obo/caro.owl
- http://purl.obolibrary.org/obo/cl.owl
- http://purl.obolibrary.org/obo/ehdaa2.owl
- http://purl.obolibrary.org/obo/emapa.owl
- http://purl.obolibrary.org/obo/fbbt.owl
- http://purl.obolibrary.org/obo/fma.owl
- http://purl.obolibrary.org/obo/go.owl
- http://purl.obolibrary.org/obo/hp.owl
- http://purl.obolibrary.org/obo/ma.owl
- http://purl.obolibrary.org/obo/mp.owl
- http://purl.obolibrary.org/obo/tao.owl
- http://purl.obolibrary.org/obo/vhog.owl
- http://purl.obolibrary.org/obo/vsao.owl
- http://purl.obolibrary.org/obo/wbbt.owl
- http://purl.obolibrary.org/obo/xao.owl
- http://purl.obolibrary.org/obo/zfa.owl
- http://uri.neuinfo.org/nif/nifstd
- http://wiki.phenotypercn.org/wg/phenotypercn/index.php?title=Neural_Crest_Workshop
- http://wiki.phenotypercn.org/wiki/August_2012_Notes
- http://www.brain-map.org
- http://www.e-lico.eu/public/kupo/kupo.owl
- http://www.ebi.ac.uk/efo/efo.owl
- https://docs.google.com/document/d/16JZOuH9sh_a8uIXA4cqg0Q1H6MV5yCj3-rhuKsZoV_U/edit
- https://docs.google.com/document/d/1cPWBqrl_Qy7XHEWFqtR_PgQX61yRkgGuLaiDpnEXxkE/edit
- https://docs.google.com/document/d/1MnUgispgGfNQoezYzWzzGTnkAnI0gzRnJIwdip6MMtw/edit
- https://docs.google.com/document/d/1r9kNPpFYGdu0SpJDLyFAVQczBlG0wAZCBMd18gG3Ot8/edit#
- https://docs.google.com/spreadsheet/ccc?key=0Aj8NJdyb-leqdDM0R3hTVTRHRExDVjRCSkZEbDc5N1E#gid=0
- ISBN:0030229073 Invertebrate Zoology, Barnes
- ISBN:0073040584 Vertebrates, Kardong
- ISBN:0123813611 Comparative Anatomy and Histology: A Mouse and Human Atlas, Treuting and Dintzis
- ISBN:0226313379 Fins into Limbs: Evolution, Development, and Transformation, Hall
- ISBN:0443065837 Human embryology, Larsen
- ISBN:0471888893 Comparative Vertebrate Neuroanatomy: Evolution and Adaptation by Butler and Hodos
- ISBN:0683400088 Stedman's Medical Dictionary
- ISBN:1588900649 Color Atlas and Textbook of Human Anatomy: Nervous system and sensory organs By Werner Kahle, Michael Frotscher
- ISBN:1588903958 Principles and practice of pediatric neurosurgery By A. Leland Albright, P. David Adelson, Ian F. Pollack
- ISBN:1607950324 Craniofacial Embryogenetics & Development, 2nd edition, Sperber
- ISBN:978-0-12-369548-2 Principles of Developmental Genetics, Sally A Moody
- ISBN:9780120749034 The laboratory rat
- ISBN:9780397517251 Surgical anatomy of the hand and upper extremity. By James R. Doyle and Michael J. Botte
- ISBN:9780674021839 The Tree of Life - Guillaume Lecointre, Herve Le Guyader
- ISBN:9780878932504 Developmental Biology
- MESH
- PMID:11433360 Placental development: lessons from mouse mutants
- PMID:16417468 Forgotten and novel aspects in pancreas development, Pieler and Chen
SVN repository
Title
Uber-anatomy ontology
treat-xrefs-as-equivalent
- AEO
- BILA
- BSPO
- CARO
- GO
- OG
- VSAO
treat-xrefs-as-has-subclass
- EHDAA
- EV
- NCIT
- OGES
- SCTID
treat-xrefs-as-is_a
- BFO
- VHOG
treat-xrefs-as-reverse-genus-differentia
- AAO part_of NCBITaxon:8292
- DHBA part_of NCBITaxon:9606
- EHDAA2 part_of NCBITaxon:9606
- EMAPA part_of NCBITaxon:10090
- FBdv part_of NCBITaxon:7227
- FMA part_of NCBITaxon:9606
- HAO part_of NCBITaxon:7399
- HBA part_of NCBITaxon:9606
- HsapDv part_of NCBITaxon:9606
- KUPO part_of NCBITaxon:9606
- MA part_of NCBITaxon:10090
- MFO part_of NCBITaxon:8089
- MmusDv part_of NCBITaxon:10090
- OlatDv part_of NCBITaxon:8089
- PBA part_of NCBITaxon:9443
- SPD part_of NCBITaxon:6893
- TADS part_of NCBITaxon:6939
- TAO part_of NCBITaxon:32443
- TGMA part_of NCBITaxon:44484
- WBbt part_of NCBITaxon:6237
- WBls part_of NCBITaxon:6237
- XAO part_of NCBITaxon:8353
- ZFA part_of NCBITaxon:7954
- ZFS part_of NCBITaxon:7954