Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 035

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 4.17 2.023 0.072
2 C2 C C2 S N N 0 3.124 0.972 -0.195
3 C3 C C3 N N N 0 1.745 1.518 0.181
4 C4 C C4 N N N 0 0.67 0.5 -0.205
5 C5 C C5 N N N 0 -0.709 1.047 0.171
6 C6 C C6 N N N 0 -1.784 0.029 -0.216
7 C7 C C7 N N N 0 -3.162 0.575 0.16
8 O8 O O8 N N N 0 4.167 3.167 -0.63
9 O9 O O9 N N N 0 5.01 1.838 0.921
10 O10 O O10 N N N 0 3.405 -0.19 0.588
11 O11 O O11 N N N 0 -4.166 -0.376 -0.2
12 P12 P P12 N N N 0 3.685 -1.637 -0.06
13 O13 O O13 N N N 0 2.557 -2.01 -0.942
14 O14 O O14 N N N 0 5.045 -1.585 -0.92
15 O15 O O15 N N N 0 3.833 -2.73 1.113
16 P16 P P16 N N N 0 -5.737 -0.13 0.05
17 O17 O O17 N N N 0 -6.237 1.108 -0.849
18 O18 O O18 N N N 0 -6.559 -1.454 -0.355
19 O19 O O19 N N N 0 -5.967 0.174 1.48
20 H2 H H2 N N N 0 3.134 0.709 -1.252
21 H3 H H3 N N N 0 1.706 1.698 1.255
22 H3A H H3A N N N 0 1.567 2.453 -0.35
23 H4 H H4 N N N 0 0.709 0.32 -1.28
24 H4A H H4A N N N 0 0.847 -0.435 0.326
25 H5 H H5 N N N 0 -0.748 1.226 1.245
26 H5A H H5A N N N 0 -0.886 1.982 -0.361
27 H7A H H7A N N N 0 -3.34 1.51 -0.371
28 H6 H H6 N N N 0 -1.745 -0.151 -1.29
29 H6A H H6A N N N 0 -1.606 -0.906 0.316
30 H7 H H7 N N N 0 -3.201 0.755 1.235
31 HO8 H HO8 N N N 0 4.858 3.811 -0.423
32 HO14 H HO14 N N N 0 5.828 -1.347 -0.405
33 HO15 H HO15 N N N 0 4.004 -3.628 0.794
34 HO17 H HO17 N N N 0 -6.117 0.977 -1.8
35 HO18 H HO18 N N N 0 -7.515 -1.378 -0.229