Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 040

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 25


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C01 N N N 0 2.406 2.24 0.107
2 C02 C C02 N Y N 0 2.645 0.753 0.049
3 C03 C C03 N Y N 0 1.562 -0.129 -0.022
4 C04 C C04 N N N 0 0.185 0.39 -0.04
5 O05 O O05 N N N 0 -0.012 1.585 -0.103
6 C06 C C06 N N N 0 -0.98 -0.563 0.019
7 C07 C C07 N N N 0 -2.269 0.216 -0.014
8 C08 C C08 N N N 0 -3.576 -0.5 0.034
9 O09 O O09 N N N 0 -3.601 -1.711 0.099
10 O10 O O10 N N N 0 -4.727 0.196 0.004
11 O11 O O11 N N N 0 -2.244 1.422 -0.079
12 C12 C C12 N Y N 0 1.795 -1.507 -0.076
13 C13 C C13 N Y N 0 3.088 -1.985 -0.059
14 C14 C C14 N Y N 0 4.154 -1.106 0.012
15 C15 C C15 N Y N 0 3.932 0.26 0.06
16 H01 H H01 N N N 0 2.257 2.624 -0.902
17 H01A H H01A N N N 0 1.519 2.442 0.707
18 H01B H H01B N N N 0 3.269 2.73 0.558
19 H06 H H06 N N N 0 -0.942 -1.238 -0.836
20 H06A H H06A N N N 0 -0.929 -1.142 0.941
21 HO10 H HO10 N N N 0 -5.549 -0.312 0.038
22 H12 H H12 N N N 0 0.964 -2.194 -0.131
23 H13 H H13 N N N 0 3.269 -3.049 -0.101
24 H14 H H14 N N N 0 5.165 -1.487 0.025
25 H15 H H15 N N N 0 4.77 0.94 0.111